DR403829

Overview
NameDR403829
Unique NameDR403829
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length700
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403829 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.575e-49
Identity = 94/198 (47.47%), Postives = 121/198 (61.11%), Query Frame = 2
Query:  107 GSAQNCGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFVQTGHETTGGWTDAPGGEYAWGYCYIRQVS-PASSD--XXXXXXXXXXXXXXXGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVI 691
            G    C      G      G  G  +  I+SR +F+ +L +RNDA CPA+ FYTYDAF+ AA AFP F  +G+   RKRE+AAF  QT HETTGGW  AP G Y+WGYC+  + +    SD                 GRGPIQ+++N NY   G+A+G +LL+NPDL+A+D  +SFK+A WFWMT Q PKPSCH V+
Sbjct:   54 GCQSQCSGSCGGGGPTPPSGGGGSGVASIVSRSLFDQMLLHRNDAACPAKNFYTYDAFVAAANAFPSFATTGDAATRKREVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYCVQSSQWPCAAGKKYYGRGPIQISYNYNYGPAGQAIGSNLLSNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVM 251          
BLAST of DR403829 vs. ExPASy Swiss-Prot
Match: CHIB_SOLLC (Acidic 27 kDa endochitinase OS=Solanum lycopersicum GN=CHI17 PE=1 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.056e-49
Identity = 96/176 (54.55%), Postives = 123/176 (69.89%), Query Frame = 2
Query:  164 GTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFVQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXXXXXXXGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVI 691
            G+   ++G I++ ++F ++L  RND RCPA+GFYTYDAFI AA +FPGFG +G++T RK+EIAAFF QT HETTGG   A  G +A GYC++R+ +   S                GRGPIQLT   NY   G+A+G DL+NNPDL+ATD  +SFK+AIWFWMTAQ  KPSCH+VI
Sbjct:   13 GSFAQDVGTIVTSDLFNEMLKNRNDDRCPAKGFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGGSLSA-DGPFAGGYCFVREGNQMGS-------------GFYGRGPIQLTGQSNYDLAGQAIGQDLVNNPDLVATDATVSFKTAIWFWMTAQGNKPSCHDVI 174          
BLAST of DR403829 vs. ExPASy Swiss-Prot
Match: CHIA_SOLLC (Acidic 26 kDa endochitinase OS=Solanum lycopersicum GN=CHI3 PE=1 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.056e-49
Identity = 95/181 (52.49%), Postives = 122/181 (67.40%), Query Frame = 2
Query:  164 GTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFVQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXXXXXXXGRGPIQLTWNCNYLRCGEALGV--DLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDE 700
            GT     G I++RE+FE +L +RN+  CPA+GFYTYDAFI AA +FPGFG +G++T RK+EIAAFF QT HET GG      G +  GYC+++Q+  +                  GRGPIQLT   NY R G+ +GV  +L+NNPDL+ATDP++SFK+AIWFWMT Q  KPSCH VII +
Sbjct:   21 GTLAQNAGSIVTRELFEQMLSFRNNDACPAKGFYTYDAFIAAANSFPGFGTAGDDTARKKEIAAFFGQTSHETNGG----SAGTFTGGYCFVKQIEQSD--------------RYYGRGPIQLTHQSNYERAGQGIGVGQELVNNPDLVATDPIISFKTAIWFWMTEQDNKPSCHNVIIGQ 183          
BLAST of DR403829 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 4.581e-49
Identity = 96/198 (48.48%), Postives = 121/198 (61.11%), Query Frame = 2
Query:  107 GSAQNCGSGVVCGERDTGHGTDGGE-LGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFVQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSD--XXXXXXXXXXXXXXXGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVI 691
            G    C  G  CG   T   + GG  +  IIS  +F+ +L +RND  C A+GFYTYDAF+ AA A+P F  +G+    KRE+AAF  QT HETTGGW  AP G Y+WGYC+  + +  +                   GRGPIQ+T+N NY   G+A+G DLLNNPDL+A+D  +SFK+A WFWMT Q PKPSCH VI
Sbjct:   52 GCQSQCSGG--CGGGPTPPSSGGGSGVASIISPSLFDQMLLHRNDQACAAKGFYTYDAFVAAANAYPDFATTGDADTCKREVAAFLAQTSHETTGGWPTAPDGPYSWGYCFKEENNGNAPTYCEPKPEWPCAAGKKYYGRGPIQITYNYNYGPAGQAIGSDLLNNPDLVASDATVSFKTAFWFWMTPQSPKPSCHAVI 247          
BLAST of DR403829 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2)

HSP 1 Score: 193.356 bits (490), Expect = 1.021e-48
Identity = 96/197 (48.73%), Postives = 119/197 (60.41%), Query Frame = 2
Query:  110 SAQNCGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNET-MRKREIAAFFVQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXXXXXXX---GRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEV 688
            SA  CG G          G+ G  +  I+SR +F+ +L +RNDA CPA  FYTYDAF+ AA AFPGF  +G +    KRE+AAF  QT HETTGGW  AP G YAWGYC+  +   A+                    GRGPIQL++N NY   G+A+G DLL +PDL+A+D  +SF +A WFWMT Q PKPSCH V
Sbjct:   61 SAAGCGGG----GPTPPSGSGGSGVASIVSRSLFDQMLLHRNDAACPASNFYTYDAFVAAASAFPGFAAAGGDADTNKREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYCQQSAQWPCAAGKKYYGRGPIQLSYNFNYGPAGQAIGADLLGDPDLVASDATVSFDTAFWFWMTPQSPKPSCHAV 253          
BLAST of DR403829 vs. ExPASy Swiss-Prot
Match: CHIT_PETHY (Acidic endochitinase OS=Petunia hybrida PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 5.600e-47
Identity = 95/176 (53.98%), Postives = 120/176 (68.18%), Query Frame = 2
Query:  164 GTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFVQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXXXXXXXGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVI 691
            GT    +G I++ ++F+ +L  RNDARC A  FYTYDAFI AA +FPGFG +G++T RK+EIAAFF QT HETTGG T +P G YA GYC++R+ +   +                GRGPIQLT   NY   G+A+  DL+NNPDL+ATD  +SFK+AIWFWMT Q  KPSCH+VI
Sbjct:   20 GTLAQNVGSIVTSDLFDQMLKNRNDARCFAVRFYTYDAFIAAANSFPGFGTTGDDTARKKEIAAFFGQTSHETTGG-TLSPDGPYAGGYCFLREGNQMGN-------------GYYGRGPIQLTGQSNYDLAGKAIEQDLVNNPDLVATDATVSFKTAIWFWMTPQGNKPSCHDVI 181          
BLAST of DR403829 vs. ExPASy Swiss-Prot
Match: CHI8_ORYSJ (Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht8 PE=2 SV=1)

HSP 1 Score: 186.037 bits (471), Expect = 1.629e-46
Identity = 93/192 (48.44%), Postives = 125/192 (65.10%), Query Frame = 2
Query:  122 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNET-MRKREIAAFFVQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXXXXXXXGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVII 694
            C +  +     +G    G  +G +I++ +F  +LP R++++CPARGFYTYDAFI AA +FP FG SG    + +RE+AAFF QT HETTGG T     ++ WGYC+  +++ A+S                GRGPIQLT   NY   G ALG+DL+ NPDL++TD V+SFK+AIWFWMTAQ  KPSCH+VI+
Sbjct:   14 CAAASLLAVAASGAAAQG--VGSVITQAVFNSMLPNRDNSQCPARGFYTYDAFIAAANSFPAFGTSGGSAELIRRELAAFFGQTSHETTGG-TRGSSDQFQWGYCFKEEINKATSPPYY------------GRGPIQLTGQSNYQAAGNALGLDLVGNPDLVSTDAVVSFKTAIWFWMTAQGNKPSCHDVIL 190          
BLAST of DR403829 vs. ExPASy Swiss-Prot
Match: CHIP_TOBAC (Acidic endochitinase P OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 8.087e-46
Identity = 91/171 (53.22%), Postives = 114/171 (66.67%), Query Frame = 2
Query:  182 LGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFVQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXXXXXXXGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVII 694
            +G I++ ++F ++L  RND RCPA GFYTYDAFI AA +FPGFG SG++T R++EIAAFF QT HETTGG   A    +  GYC++RQ   +                  GRGPIQLT   NY + G A+  DL+NNPDL+ATD  +SFK+AIWFWMT Q  KPS H+VII
Sbjct:   27 IGSIVTNDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTSGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQNDQSD--------------RYYGRGPIQLTNQNNYEKAGNAIRQDLVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVII 181          
BLAST of DR403829 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.056e-45
Identity = 90/171 (52.63%), Postives = 115/171 (67.25%), Query Frame = 2
Query:  182 LGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFVQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXXXXXXXGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVII 694
            +G I++ ++F ++L  RND RCPA GFYTYDAFI AA +FPGFG +G++T R++EIAAFF QT HETTGG   A    +  GYC++RQ   +                  GRGPIQLT   NY + G A+G +L+NNPDL+ATD  +SFK+AIWFWMT Q  KPS H+VII
Sbjct:   27 IGSIVTSDLFNEMLKNRNDGRCPANGFYTYDAFIAAANSFPGFGTTGDDTARRKEIAAFFGQTSHETTGGSLSAE--PFTGGYCFVRQNDQSD--------------RYYGRGPIQLTNRNNYEKAGTAIGQELVNNPDLVATDATISFKTAIWFWMTPQDNKPSSHDVII 181          
BLAST of DR403829 vs. ExPASy Swiss-Prot
Match: CHI10_ORYSJ (Chitinase 10 OS=Oryza sativa subsp. japonica GN=Cht10 PE=2 SV=1)

HSP 1 Score: 182.57 bits (462), Expect = 1.802e-45
Identity = 83/183 (45.36%), Postives = 114/183 (62.30%), Query Frame = 2
Query:  158 GHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFVQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASS--DXXXXXXXXXXXXXXXGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDE 700
            G+      +  I+S +++  L  +++DA CPARGFYTY +F+ AA  FP F  +G    RKRE+AAF  Q  HETTGGW  AP G YAWG CY  +++P SS  D               GRGPIQ++WN NY   G+ALG D L NP+++A    ++F++A+WFWMT +  KPSCH+V++ E
Sbjct:   41 GYSPSPSPVSSIVSEQLYASLFLHKDDAACPARGFYTYASFVRAATRFPRFAATGCADARKREVAAFLAQISHETTGGWATAPDGPYAWGLCYKEEINPQSSYCDATDKQWPCYPGKSYHGRGPIQISWNFNYGPAGQALGFDGLRNPEIVANCSDIAFQTALWFWMTPRDTKPSCHQVMVGE 223          
The following BLAST results are available for this feature:
BLAST of DR403829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
CHI1_ORYSJ1.575e-4947.47Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHIB_SOLLC2.056e-4954.55Acidic 27 kDa endochitinase OS=Solanum lycopersicu... [more]
CHIA_SOLLC2.056e-4952.49Acidic 26 kDa endochitinase OS=Solanum lycopersicu... [more]
CHI3_ORYSJ4.581e-4948.48Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI12_ORYSJ1.021e-4848.73Chitinase 12 OS=Oryza sativa subsp. japonica GN=Ch... [more]
CHIT_PETHY5.600e-4753.98Acidic endochitinase OS=Petunia hybrida PE=2 SV=1[more]
CHI8_ORYSJ1.629e-4648.44Chitinase 8 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHIP_TOBAC8.087e-4653.22Acidic endochitinase P OS=Nicotiana tabacum PE=1 S... [more]
CHIQ_TOBAC1.056e-4552.63Acidic endochitinase Q OS=Nicotiana tabacum PE=1 S... [more]
CHI10_ORYSJ1.802e-4545.36Chitinase 10 OS=Oryza sativa subsp. japonica GN=Ch... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246G13 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246G13 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403829 ID=DR403829; Name=DR403829; organism=Citrus sinensis; type=EST; length=700bp
GGGGGACACCAAGTAAAGGCATTATTGATATCATAACTCTTGCTTTCAAA
TNNNNNNNNTTGGGTCCTTACTAATTTTCTCTCTAGTTTTATCTTTTGTA
CTAGGAGGTTCAGCACAGAATTGTGGAAGCGGCGTTGTGTGCGGTGAACG
TGATACTGGCCACGGGACGGATGGCGGTGAACTGGGCAAGATCATCTCAA
GGGAGATGTTTGAAGACTTGCTTCCGTATAGAAATGATGCCCGATGCCCT
GCCAGAGGCTTCTACACTTATGATGCTTTTATAGAGGCAGCCCAAGCTTT
TCCAGGCTTTGGTAACTCTGGAAATGAAACCATGCGTAAAAGAGAAATTG
CTGCCTTTTTTGTCCAAACTGGCCATGAAACTACTGGGGGATGGACCGAT
GCACCTGGTGGAGAATATGCTTGGGGATATTGCTATATTAGGCAAGTTAG
CCCTGCGTCGTCCGACTACTGTTATCCTTACTGTCCATGTCCCTTGCCAG
GGCAATACTGTGGCCGAGGTCCAATTCAACTCACTTGGAATTGCAATTAC
TTAAGGTGCGGAGAAGCCTTGGGGGTGGACTTGTTGAACAATCCAGACCT
ACTTGCCACTGATCCAGTACTATCATTCAAGTCAGCAATCTGGTTCTGGA
TGACTGCACAGCCACCAAAGCCATCGTGCCACGAAGTCATTATCGACGAA
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