DR403829
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR403829 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2) HSP 1 Score: 176.022 bits (445), Expect = 1.686e-43 Identity = 89/191 (46.60%), Postives = 109/191 (57.07%), Query Frame = 2 Query: 125 GSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFVQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXXXXXXXGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIID 697 G G G G G G L II MF+D+L YRND +CPA GFYTY+AFI AA+ FP FGN+G++ MRKREIAAF QT HET G W A G +Y WGYC++ N NY CG+ L + LL P+L+ TDP ++FK+A+WFWMT Q PKPSCH VI + Sbjct: 66 GGGGGGGGGGGGGGGGDGYLSDIIPESMFDDMLKYRNDPQCPAVGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETNGWWPAAQGDQYDWGYCHM---------------------------------NYNYGLCGDDLNLPLLQEPELVETDPFIAFKTALWFWMTPQSPKPSCHAVITE 223
BLAST of DR403829 vs. ExPASy Swiss-Prot
Match: CHI8_POPTR (Endochitinase WIN8 OS=Populus trichocarpa GN=WIN8 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.745e-40 Identity = 79/170 (46.47%), Postives = 104/170 (61.18%), Query Frame = 2 Query: 197 SREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFVQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASS-DXXXXXXXXXXXXXXXGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPP-KPSCHEVIIDE 700 + MFE +LP RN+ CP +GFYTYDA+ A + +PGFG +G++ RKRE+AAFF QT ET+G + WGYC + +++P S GRGP+QL WN NY CG LG +LL+ P+ +ATDPVLSF++A+WFWM PSCHEVI E Sbjct: 68 TESMFEQMLPNRNNDSCPGKGFYTYDAYFVATEFYPGFGMTGDDDTRKRELAAFFAQTSQETSGRSIIGEDAPFTWGYCLVNELNPNSDYCDPKTKSSYPCVADYYGRGPLQLRWNYNYGECGNYLGQNLLDEPEKVATDPVLSFEAALWFWMNPHSTGAPSCHEVITGE 237
BLAST of DR403829 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.745e-40 Identity = 84/178 (47.19%), Postives = 113/178 (63.48%), Query Frame = 2 Query: 173 GGELG--KIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFVQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSD--XXXXXXXXXXXXXXXGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQ-PPKPSCHEVI 691 GG G +++ + FE +LP+R+DA CPARGFY Y AF+ AA AFP F +G+ RKRE+AAF QT H T+ GG Y+WGYCY ++V A+SD RGP+Q+ +N NY GEA+G DLL NP+L+ATDP ++FK+A+W WMTA+ P +PS H V+ Sbjct: 92 GGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCY-KEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVV 261
BLAST of DR403829 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1) HSP 1 Score: 166.007 bits (419), Expect = 1.745e-40 Identity = 84/178 (47.19%), Postives = 113/178 (63.48%), Query Frame = 2 Query: 173 GGELG--KIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFVQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSD--XXXXXXXXXXXXXXXGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQ-PPKPSCHEVI 691 GG G +++ + FE +LP+R+DA CPARGFY Y AF+ AA AFP F +G+ RKRE+AAF QT H T+ GG Y+WGYCY ++V A+SD RGP+Q+ +N NY GEA+G DLL NP+L+ATDP ++FK+A+W WMTA+ P +PS H V+ Sbjct: 92 GGRAGVASVVTSDQFERMLPHRDDAACPARGFYAYRAFVAAAGAFPAFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCY-KEVKGATSDFCVPNARWPCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTALWLWMTARSPSQPSPHAVV 261
BLAST of DR403829 vs. ExPASy Swiss-Prot
Match: CHIT_AVESA (Endochitinase (Fragments) OS=Avena sativa PE=1 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 4.752e-38 Identity = 81/170 (47.65%), Postives = 105/170 (61.76%), Query Frame = 2 Query: 182 LGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFVQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXXXXXXXGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVI 691 + +IS +FE +L +R GFYTYDAFI AA++FP F +G+ +RKRE+AAF QT HETTGGW AP G Y G ++SD GRGPIQ+++N NY G+A+GVDLL NPDL+ +D + FK+A+WFWMT Q PKPS H+VI Sbjct: 1 VSSVISSSLFEKMLLHR--------GFYTYDAFIAAAKSFPAFATTGSTDVRKREVAAFLAQTSHETTGGWPTAPDGPYELG---------STSDYF-------------GRGPIQISYNYNYGAAGKAIGVDLLRNPDLVTSDNTVEFKTALWFWMTPQSPKPSSHDVI 140
BLAST of DR403829 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3) HSP 1 Score: 146.747 bits (369), Expect = 1.095e-34 Identity = 69/182 (37.91%), Postives = 107/182 (58.79%), Query Frame = 2 Query: 155 TGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFVQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXXXXXXXG-RGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIID 697 +G+ T +++ +F+ + +R D CP++GFY+Y +F+ AA++FP FG G+ RKRE+AAF T+G +D +AWG C+I + +D RGPIQLT N NY G+A+G DL+ NPDL+ DP++SFK+A+WFWM+ KPSCH+++++ Sbjct: 121 SGNSTANSIGNVVVTEPLFDQMFSHRKD--CPSQGFYSYHSFLVAAESFPAFGTIGDVATRKREVAAFLAHISQATSGERSDVEN-PHAWGLCHINTTTVTENDFCTSSDWPCAAGKKYSPRGPIQLTHNFNYGLAGQAIGEDLIQNPDLVEKDPIISFKTALWFWMSQHDNKPSCHDIVLN 299
BLAST of DR403829 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.173e-26 Identity = 65/179 (36.31%), Postives = 93/179 (51.96%), Query Frame = 2 Query: 122 CGSGVVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFVQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASS---DXXXXXXXXXXXXXXXGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFW 649 CG+G G D T+ + I++ E F L+ +D C A+GFYT DAF+ AA +P FG +G+ KREIAAFF HET +CYI ++ S D GRGP+Q++WN NY G+++G D L +PD +A PVL+F++A+W+W Sbjct: 49 CGTGCQAGPCDVP-ATNDVSVASIVTPEFFAALVAQADDG-CAAKGFYTRDAFLTAAGGYPSFGRTGSVDDSKREIAAFFAHANHETIK-------------FCYIEEIDGPSKNYCDETSTQWPCMAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSPVLAFQTALWYW 212
BLAST of DR403829 vs. ExPASy Swiss-Prot
Match: CHIT_DIOJA (Acidic endochitinase OS=Dioscorea japonica PE=1 SV=2) HSP 1 Score: 114.005 bits (284), Expect = 7.869e-25 Identity = 65/178 (36.52%), Postives = 92/178 (51.69%), Query Frame = 2 Query: 122 CGSGVVCGER-DTGHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFVQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXXXXXXXGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWM 652 CG G G D G + I+++E F D + + A CP + FYT F+EA A+PGFG + RKREIAA+F HET +A YC Q P + + GRGP+QL+WN NY+ G+ L D LN+PD++ DP++SFK+++WFW+ Sbjct: 25 CGPGCQAGPCWDPCEGDGTLTVSDIVTQE-FWDGIASQAAANCPGKSFYTRSNFLEAVSAYPGFGTKCTDEDRKREIAAYFAHVTHETGHLCYIEERDGHANNYCQESQQYPCNPNKEYF-----------GRGPMQLSWNYNYIDAGKELHFDGLNDPDIVGRDPIISFKTSLWFWI 190
BLAST of DR403829 vs. ExPASy Swiss-Prot
Match: CHI4_BRANA (Basic endochitinase CHB4 OS=Brassica napus PE=1 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 1.028e-24 Identity = 64/189 (33.86%), Postives = 96/189 (50.79%), Query Frame = 2 Query: 122 CGSGVVCGERDTGHGTD----GGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFVQTGHETTGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXXXXXXXG---RGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPP 667 CG+G G + GT GG +G I+++ F ++ C + FYT D+FI AA FP F NS + +REIA F HET +CYI +++ AS D G RGPIQL+WN NY CG++L ++LL P+L++++P ++F++ +WFWM + P Sbjct: 48 CGTGCRSGPCRSPGGTPSPPGGGSVGSIVTQAFFNGIINQAGGG-CAGKNFYTRDSFINAANTFPNFANS----VTRREIATMFAHFTHETGH-------------FCYIEEINGASRDYCDENNRQYPCAPGKGYFGRGPIQLSWNYNYGACGQSLNLNLLGQPELVSSNPTVAFRTGLWFWMNSVRP 218
BLAST of DR403829 vs. ExPASy Swiss-Prot
Match: CHIP_BETVU (Acidic endochitinase SP2 OS=Beta vulgaris GN=SP2 PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.662e-24 Identity = 70/191 (36.65%), Postives = 90/191 (47.12%), Query Frame = 2 Query: 119 NCGSGVVCGERDT-----------GHGTDGGELGKIISREMFEDLLPYRNDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKREIAAFFVQTGHETTG-GWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXXXXXXXXGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMT 655 NC SG G T G G G + I+S+ F+ ++ + A CP + FYT AF+ A P FGN G+ KREIAAFF HETT + G+ YC GRGP+QL+WN NY G+A+G D L NP+ +ATD SFK+A+WFWMT Sbjct: 55 NCQSGPCEGGTPTTPTTPTTPTTPGTGGGGSSVSDIVSQAFFDGIIG-QAAASCPGKNFYTRAAFLSAVD--PKFGNEGSSDDNKREIAAFFAHISHETTNLCHIEERDGDVGDAYC---------DQDKAAQYPCAAGKKYYGRGPLQLSWNYNYALAGQAIGFDGLGNPEKVATDVNTSFKAAMWFWMT 233 The following BLAST results are available for this feature:
BLAST of DR403829 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403829 ID=DR403829; Name=DR403829; organism=Citrus sinensis; type=EST; length=700bpback to top |