DR403828

Overview
NameDR403828
Unique NameDR403828
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length684
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403828 vs. ExPASy Swiss-Prot
Match: PIP26_ORYSJ (Probable aquaporin PIP2-6 OS=Oryza sativa subsp. japonica GN=PIP2-6 PE=2 SV=2)

HSP 1 Score: 186.037 bits (471), Expect = 1.072e-57
Identity = 93/126 (73.81%), Postives = 101/126 (80.16%), Query Frame = 2
Query:  305 IGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 682
            IGYK Q+    + D C GVG LGIAWAFGGMIF+LVYCTAGISGGHINPAVTFGL LARKVS++RAVMY+VAQCLG I GVG+VK   K  Y   GGGAN +A GYSTG  L AEIIGTFVLVYTV
Sbjct:   59 IGYKVQS----SADQCGGVGTLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVSVIRAVMYIVAQCLGGIVGVGIVKGIMKHQYNANGGGANMVASGYSTGTALGAEIIGTFVLVYTV 180          

HSP 2 Score: 58.9214 bits (141), Expect = 1.072e-57
Identity = 28/37 (75.68%), Postives = 28/37 (75.68%), Query Frame = 1
Query:  175 KDYTDPPPEPLFDAVELTKWSFYRALIAEFINPALSL 285
            KDYTDPPP PLFD  EL  WSFYRALIAEFI   L L
Sbjct:   15 KDYTDPPPAPLFDVGELRLWSFYRALIAEFIATLLFL 51          
BLAST of DR403828 vs. ExPASy Swiss-Prot
Match: PIP1_ATRCA (Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 3.097e-57
Identity = 93/126 (73.81%), Postives = 105/126 (83.33%), Query Frame = 2
Query:  305 IGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 682
            IGYK +TDP      CA VG+LGIAW+FGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSL+RA++YM+AQC GAI GVGLVKAF K  Y ++GGGAN +A GY+ G    AE+IGTFVLVYTV
Sbjct:   61 IGYKKETDP------CASVGLLGIAWSFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLLRALVYMIAQCAGAICGVGLVKAFMKGPYNQFGGGANSVALGYNKGTAFGAELIGTFVLVYTV 180          

HSP 2 Score: 52.7582 bits (125), Expect = 3.097e-57
Identity = 27/52 (51.92%), Postives = 33/52 (63.46%), Query Frame = 1
Query:  130 MAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFINPALSL 285
            ++++  V +HG    KDY DPPP P FD  EL  WSF+RA IAEFI   L L
Sbjct:    6 ISEEGQVHQHG----KDYVDPPPAPFFDMGELKLWSFWRAAIAEFIATLLFL 53          
BLAST of DR403828 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1)

HSP 1 Score: 176.022 bits (445), Expect = 1.631e-52
Identity = 86/111 (77.48%), Postives = 92/111 (82.88%), Query Frame = 2
Query:  350 CAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 682
            CA VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV YM+ QCLGAI G G+VK FQ + Y   GGGAN +A GY+ G GL AEIIGTFVLVYTV
Sbjct:   83 CASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMIMQCLGAICGAGVVKGFQPTPYQTLGGGANTVAHGYTKGSGLGAEIIGTFVLVYTV 193          

HSP 2 Score: 51.6026 bits (122), Expect = 1.631e-52
Identity = 27/54 (50.00%), Postives = 33/54 (61.11%), Query Frame = 1
Query:  124 FPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFINPALSL 285
            FP  +  G +   +   KDY +PPP PLF+  EL+ WSFYRA IAEFI   L L
Sbjct:   15 FPERQPIGTSAQST--DKDYKEPPPAPLFEPGELSSWSFYRAGIAEFIATFLFL 66          
BLAST of DR403828 vs. ExPASy Swiss-Prot
Match: PIP15_MAIZE (Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 1.631e-52
Identity = 84/117 (71.79%), Postives = 94/117 (80.34%), Query Frame = 2
Query:  332 AKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 682
            +K+   CA VGI GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ YMV QCLGAI G G+VK FQ+  Y   GGGAN +  GY+ G GL AEI+GTFVLVYTV
Sbjct:   78 SKSSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQEGLYMGAGGGANAVNPGYTKGDGLGAEIVGTFVLVYTV 194          

HSP 2 Score: 55.8398 bits (133), Expect = 1.631e-52
Identity = 28/47 (59.57%), Postives = 32/47 (68.09%), Query Frame = 1
Query:  145 GVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFINPALSL 285
            G A  G+   KDY +PPP PLF+A ELT WSFYRA IAEF+   L L
Sbjct:   22 GTAAQGT-EEKDYKEPPPAPLFEAEELTSWSFYRAGIAEFVATFLFL 67          
BLAST of DR403828 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 2.126e-52
Identity = 83/117 (70.94%), Postives = 95/117 (81.20%), Query Frame = 2
Query:  332 AKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 682
            +K+   CA VGI GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y+V QCLGAI G G+VK FQ+  Y   GGGAN +A GY+ G GL AEI+GTF+LVYTV
Sbjct:   79 SKSSSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIVMQCLGAICGAGVVKGFQQGLYMGNGGGANVVASGYTKGDGLGAEIVGTFILVYTV 195          

HSP 2 Score: 54.299 bits (129), Expect = 2.126e-52
Identity = 26/47 (55.32%), Postives = 30/47 (63.83%), Query Frame = 1
Query:  145 GVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFINPALSL 285
            G A  G+   KDY +PPP PLF+  EL  WSFYRA IAEF+   L L
Sbjct:   22 GTAAQGAGDDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFL 68          
BLAST of DR403828 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 2.771e-52
Identity = 81/117 (69.23%), Postives = 95/117 (81.20%), Query Frame = 2
Query:  332 AKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 682
            +K+   CA VGI GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y++ QCLGA+ G G+VK FQ+  Y   GGGAN +A GY+ G GL AEI+GTF+LVYTV
Sbjct:   79 SKSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIIMQCLGAVCGAGVVKGFQQGLYMGNGGGANVVAPGYTKGDGLGAEIVGTFILVYTV 195          

HSP 2 Score: 55.0694 bits (131), Expect = 2.771e-52
Identity = 27/54 (50.00%), Postives = 32/54 (59.26%), Query Frame = 1
Query:  124 FPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFINPALSL 285
            F   +  G A  G+   KDY +PPP PLF+  EL  WSFYRA IAEF+   L L
Sbjct:   15 FSERQPIGTAAQGAADDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFL 68          
BLAST of DR403828 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3)

HSP 1 Score: 174.096 bits (440), Expect = 6.138e-52
Identity = 84/111 (75.68%), Postives = 92/111 (82.88%), Query Frame = 2
Query:  350 CAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 682
            CA VGI GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ YMV QCLGAI G G+VK FQK  Y   GGGAN +A GY+ G GL AEI+GTF+LVYTV
Sbjct:   84 CATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFQKGLYETTGGGANVVAPGYTKGDGLGAEIVGTFILVYTV 194          

HSP 2 Score: 51.6026 bits (122), Expect = 6.138e-52
Identity = 28/54 (51.85%), Postives = 32/54 (59.26%), Query Frame = 1
Query:  124 FPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFINPALSL 285
            F   +  G A  GS   KDY +PPP PLF+  EL  WSFYRA IAEF+   L L
Sbjct:   15 FSERQPIGTAAQGS-DDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFMATFLFL 67          
BLAST of DR403828 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 6.139e-52
Identity = 86/111 (77.48%), Postives = 91/111 (81.98%), Query Frame = 2
Query:  350 CAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 682
            CA VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV Y+V QCLGAI G G+VK FQ   Y   GGGAN +A GY+ G GL AEIIGTFVLVYTV
Sbjct:   82 CASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTIAHGYTKGSGLGAEIIGTFVLVYTV 192          

HSP 2 Score: 50.447 bits (119), Expect = 6.139e-52
Identity = 27/54 (50.00%), Postives = 33/54 (61.11%), Query Frame = 1
Query:  124 FPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFINPALSL 285
            FP  +  G +   + S KDY +PPP PLF+  EL  WSF+RA IAEFI   L L
Sbjct:   15 FPERQPIGTS---AQSDKDYKEPPPAPLFEPGELASWSFWRAGIAEFIATFLFL 65          
BLAST of DR403828 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1)

HSP 1 Score: 174.866 bits (442), Expect = 1.043e-51
Identity = 86/111 (77.48%), Postives = 92/111 (82.88%), Query Frame = 2
Query:  350 CAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 682
            CA VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV Y+V QCLGAI G G+VK FQ + Y   GGGAN +A GY+ G GL AEIIGTFVLVYTV
Sbjct:   82 CASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYIVMQCLGAICGAGVVKGFQPNPYQTLGGGANTVAHGYTKGSGLGAEIIGTFVLVYTV 192          

HSP 2 Score: 50.0618 bits (118), Expect = 1.043e-51
Identity = 26/54 (48.15%), Postives = 33/54 (61.11%), Query Frame = 1
Query:  124 FPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFINPALSL 285
            FP  +  G +   + + KDY +PPP P F+  EL+ WSFYRA IAEFI   L L
Sbjct:   15 FPERQPIGTS---AQTDKDYKEPPPAPFFEPGELSSWSFYRAGIAEFIATFLFL 65          
BLAST of DR403828 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2)

HSP 1 Score: 172.94 bits (437), Expect = 2.310e-51
Identity = 84/111 (75.68%), Postives = 91/111 (81.98%), Query Frame = 2
Query:  350 CAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 682
            CA VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y+V QCLGAI G G+VK FQ   Y   GGGAN +A GY+ G GL AEI+GTFVLVYTV
Sbjct:   83 CASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALFYIVMQCLGAICGAGVVKGFQPGLYQTNGGGANVVAHGYTKGSGLGAEIVGTFVLVYTV 193          

HSP 2 Score: 50.8322 bits (120), Expect = 2.310e-51
Identity = 27/54 (50.00%), Postives = 31/54 (57.41%), Query Frame = 1
Query:  124 FPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFINPALSL 285
            FP  +  G A      +KDY +PPP P F+  EL  WSFYRA IAEFI   L L
Sbjct:   15 FPERQPIGTA--AQTESKDYKEPPPAPFFEPGELKSWSFYRAGIAEFIATFLFL 66          
The following BLAST results are available for this feature:
BLAST of DR403828 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
PIP26_ORYSJ1.072e-5773.81Probable aquaporin PIP2-6 OS=Oryza sativa subsp. j... [more]
PIP1_ATRCA3.097e-5773.81Aquaporin PIP-type OS=Atriplex canescens PE=2 SV=1[more]
PIP14_ARATH1.631e-5277.48Probable aquaporin PIP1-4 OS=Arabidopsis thaliana ... [more]
PIP15_MAIZE1.631e-5271.79Aquaporin PIP1-5 OS=Zea mays GN=PIP1-5 PE=2 SV=1[more]
PIP11_ORYSJ2.126e-5270.94Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica G... [more]
PIP12_MAIZE2.771e-5269.23Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1[more]
PIP12_ORYSJ6.138e-5275.68Probable aquaporin PIP1-2 OS=Oryza sativa subsp. j... [more]
PIP12_ARATH6.139e-5277.48Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2... [more]
PIP13_ARATH1.043e-5177.48Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3... [more]
PIP15_ARATH2.310e-5175.68Probable aquaporin PIP1-5 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246G12 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246G12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403828 ID=DR403828; Name=DR403828; organism=Citrus sinensis; type=EST; length=684bp
CGGCCGGGGAGCAAAAAAAAAGAAAAATNNNNAAGAAAAAGGAAAAGGCT
TCTCTCTCGTTGTGCTTGTGGCTTTGCAGTGCTCTCAGTTTTCTCTGTTT
CTCTCCAAATCATTGTTACTGGTTTTCCAATGGCGAAGGACACTGGGGTG
GCAGAGCACGGCTCATATTCAGCCAAGGACTACACGGACCCACCGCCGGA
GCCGCTATTCGACGCCGTGGAGCTGACCAAATGGTCATTCTACAGAGCCT
TGATAGCTGAGTTCATCAACCCTGCTCTTTCTTTACGTCACTGTCTTGAC
TGTCATTGGCTACAAAAGCCAGACCGATCCCGCCAAGAACGTCGACGGCT
GTGCTGGCGTCGGCATCCTCGGCATCGCCTGGGCCTTCGGTGGCATGATC
TTTGTCCTCGTTTACTGCACCGCCGGTATCTCAGGTGGTCACATTAACCC
GGCAGTGACGTTCGGACTATTCTTGGCCCGCAAGGTGTCGTTGGTCCGTG
CTGTGATGTACATGGTGGCGCAGTGCCTTGGTGCTATCTCCGGTGTTGGG
TTGGTCAAGGCTTTCCAAAAATCTTACTACACAAGGTACGGAGGTGGGGC
CAACGAGCTGGCCGATGGGTACAGCACCGGCGTTGGATTGGCCGCCGAGA
TCATCGGCACCTTTGTCTTGGTTTACACTGTCTT
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