DR403828

Overview
NameDR403828
Unique NameDR403828
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length684
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403828 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 3.011e-51
Identity = 82/117 (70.09%), Postives = 95/117 (81.20%), Query Frame = 2
Query:  332 AKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 682
            +K+   CA VGI GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y++ QCLGAI G G+VK FQ+  Y   GGGAN +A GY+ G GL AEI+GTF+LVYTV
Sbjct:   82 SKSTSKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIIMQCLGAICGAGVVKGFQQGLYMGNGGGANVVAPGYTKGDGLGAEIVGTFILVYTV 198          

HSP 2 Score: 50.447 bits (119), Expect = 3.011e-51
Identity = 27/57 (47.37%), Postives = 33/57 (57.89%), Query Frame = 1
Query:  124 FPMAKDTGVAEHGSYSA---KDYTDPPPEPLFDAVELTKWSFYRALIAEFINPALSL 285
            F   +  G A  G+ +    KDY +PPP PLF+  EL  WSFYRA IAEF+   L L
Sbjct:   15 FSERQPIGTAAQGAGAGDDDKDYKEPPPAPLFEPGELKSWSFYRAGIAEFVATFLFL 71          
BLAST of DR403828 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 3.926e-51
Identity = 85/111 (76.58%), Postives = 91/111 (81.98%), Query Frame = 2
Query:  350 CAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 682
            CA VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y+V QCLGAI G G+VK FQ   Y   GGGAN +A GY+ G GL AEIIGTFVLVYTV
Sbjct:   82 CASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTV 192          

HSP 2 Score: 49.2914 bits (116), Expect = 3.926e-51
Identity = 26/54 (48.15%), Postives = 33/54 (61.11%), Query Frame = 1
Query:  124 FPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFINPALSL 285
            FP  +  G +   + S KDY +PPP P F+  EL+ WSF+RA IAEFI   L L
Sbjct:   15 FPERQPIGTS---AQSDKDYKEPPPAPFFEPGELSSWSFWRAGIAEFIATFLFL 65          
BLAST of DR403828 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 3.926e-51
Identity = 85/111 (76.58%), Postives = 91/111 (81.98%), Query Frame = 2
Query:  350 CAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 682
            CA VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ Y+V QCLGAI G G+VK FQ   Y   GGGAN +A GY+ G GL AEIIGTFVLVYTV
Sbjct:   82 CASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRALYYIVMQCLGAICGAGVVKGFQPKQYQALGGGANTVAHGYTKGSGLGAEIIGTFVLVYTV 192          

HSP 2 Score: 49.2914 bits (116), Expect = 3.926e-51
Identity = 26/54 (48.15%), Postives = 33/54 (61.11%), Query Frame = 1
Query:  124 FPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFINPALSL 285
            FP  +  G +   + S KDY +PPP P F+  EL+ WSF+RA IAEFI   L L
Sbjct:   15 FPERQPIGTS---AQSDKDYKEPPPAPFFEPGELSSWSFWRAGIAEFIATFLFL 65          
BLAST of DR403828 vs. ExPASy Swiss-Prot
Match: PIP13_ORYSJ (Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica GN=PIP1-3 PE=2 SV=2)

HSP 1 Score: 172.17 bits (435), Expect = 6.669e-51
Identity = 84/116 (72.41%), Postives = 92/116 (79.31%), Query Frame = 2
Query:  335 KNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 682
            K+   CA VGI GIAW+FGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV YM  QCLGAI G G+VK FQ+  Y   GGGAN +  GY+ G GL AEI+GTFVLVYTV
Sbjct:   79 KSASKCATVGIQGIAWSFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMAMQCLGAICGAGVVKGFQRGLYMGSGGGANAVNPGYTKGDGLGAEIVGTFVLVYTV 194          

HSP 2 Score: 50.0618 bits (118), Expect = 6.669e-51
Identity = 25/47 (53.19%), Postives = 30/47 (63.83%), Query Frame = 1
Query:  145 GVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFINPALSL 285
            G A  G+   KDY +PP  P+F+  ELT WSFYRA IAEF+   L L
Sbjct:   22 GTAAQGA-EEKDYREPPAAPVFEVEELTSWSFYRAGIAEFVATFLFL 67          
BLAST of DR403828 vs. ExPASy Swiss-Prot
Match: PIP1_SOLLC (Probable aquaporin PIP-type pTOM75 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.133e-50
Identity = 84/111 (75.68%), Postives = 90/111 (81.08%), Query Frame = 2
Query:  350 CAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 682
            C+ VGI G+AWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RAV YMV QCLGAI G G+VK F    Y R GGGAN +  GY+ G GL AEIIGTFVLVYTV
Sbjct:   83 CSSVGIQGVAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYMVMQCLGAICGAGVVKGFMVGPYQRLGGGANVVNPGYTKGDGLGAEIIGTFVLVYTV 193          

HSP 2 Score: 50.0618 bits (118), Expect = 1.133e-50
Identity = 23/37 (62.16%), Postives = 27/37 (72.97%), Query Frame = 1
Query:  175 KDYTDPPPEPLFDAVELTKWSFYRALIAEFINPALSL 285
            KDY +PPP PLF+  EL+ WSFYRA IAEF+   L L
Sbjct:   30 KDYKEPPPAPLFEPGELSSWSFYRAGIAEFMATFLFL 66          
BLAST of DR403828 vs. ExPASy Swiss-Prot
Match: PIP27_ORYSJ (Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica GN=PIP2-7 PE=2 SV=2)

HSP 1 Score: 171.014 bits (432), Expect = 1.477e-50
Identity = 82/126 (65.08%), Postives = 95/126 (75.40%), Query Frame = 2
Query:  305 IGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 682
            IGYK+Q      VD C GVG LG+AW+FG  IFVLVYCT G+SGGHINPAVT GLF  RK+SLVR V+Y+VAQCLGAI+G G+VK   K  Y   GGGAN ++DGYS    L AEI+GTF+LVYTV
Sbjct:   65 IGYKNQR---ATVDACTGVGYLGVAWSFGATIFVLVYCTGGVSGGHINPAVTLGLFFGRKLSLVRTVLYVVAQCLGAIAGAGIVKGIMKRPYDALGGGANTVSDGYSAAGALGAEIVGTFILVYTV 187          

HSP 2 Score: 50.0618 bits (118), Expect = 1.477e-50
Identity = 25/39 (64.10%), Postives = 28/39 (71.79%), Query Frame = 1
Query:  154 EHGSYSAK-DYTDPPPEPLFDAVELTKWSFYRALIAEFI 267
            E G+ +AK  Y DPPP PL D  EL KWS YRALIAEF+
Sbjct:   13 EGGAAAAKAPYWDPPPAPLLDTSELGKWSLYRALIAEFM 51          
BLAST of DR403828 vs. ExPASy Swiss-Prot
Match: PIP2_PEA (Probable aquaporin PIP-type 7a OS=Pisum sativum GN=TRG-31 PE=2 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 5.558e-50
Identity = 80/112 (71.43%), Postives = 89/112 (79.46%), Query Frame = 2
Query:  350 CAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQ-KSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 682
            C  VGI GIAWAFGGMIF LVYCTAGISGGHINPAVTFGLFLARK+SL RA+ YMV Q LGAI G G+VK F+ K  +    GGAN +A GY+ G GL AEI+GTF+LVYTV
Sbjct:   85 CKTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYMVMQVLGAICGAGVVKGFEGKQRFGDLNGGANFVAPGYTKGDGLGAEIVGTFILVYTV 196          

HSP 2 Score: 59.6918 bits (143), Expect = 5.558e-50
Identity = 29/54 (53.70%), Postives = 33/54 (61.11%), Query Frame = 1
Query:  124 FPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFINPALSL 285
            FP  +  G+A       KDY +PPP PLF+  ELT WSFYRA IAEFI   L L
Sbjct:   15 FPERQPLGIAAQSQDEPKDYQEPPPAPLFEPSELTSWSFYRAGIAEFIATFLFL 68          
BLAST of DR403828 vs. ExPASy Swiss-Prot
Match: PIP16_MAIZE (Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 9.439e-50
Identity = 80/117 (68.38%), Postives = 93/117 (79.49%), Query Frame = 2
Query:  332 AKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 682
            +K+   C  VGI GIAWAFGGMIF LVYCTAG+SGGHINPAVTFGL LARK+SL RAV Y+V QCLGA+ G G+VKAF  + Y   GGGAN ++ GY+ G GL AE++GTFVLVYTV
Sbjct:   84 SKSPSKCGTVGIQGIAWAFGGMIFALVYCTAGVSGGHINPAVTFGLLLARKLSLTRAVYYVVMQCLGAVCGAGVVKAFGSALYESAGGGANAVSPGYTKGDGLGAEVVGTFVLVYTV 200          

HSP 2 Score: 50.8322 bits (120), Expect = 9.439e-50
Identity = 27/61 (44.26%), Postives = 37/61 (60.66%), Query Frame = 1
Query:  103 LQIIVTGFPMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFINPALSL 285
            +++ V  FP  +  G A       +DY++PP  PLF+A EL+ WSFYRA IAEF+   L L
Sbjct:   15 VRVGVDRFPERQPIGTAADDL--GRDYSEPPAAPLFEASELSSWSFYRAGIAEFVATFLFL 73          
BLAST of DR403828 vs. ExPASy Swiss-Prot
Match: PIP28_ORYSJ (Probable aquaporin PIP2-8 OS=Oryza sativa subsp. japonica GN=PIP2-8 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 6.554e-48
Identity = 78/117 (66.67%), Postives = 92/117 (78.63%), Query Frame = 2
Query:  335 KNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQ-KSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 682
            K   G  G G+LGIAWAFGG+IFVLVYCTAGISGGH+NPAVTF + LAR+VSL RA +Y +AQC+GA+ G GL +A      Y R+GGGANELA GYS G G+ AE++GTFVLVYTV
Sbjct:   59 KRQSGEGGAGVLGIAWAFGGLIFVLVYCTAGISGGHMNPAVTFAMVLARRVSLPRAALYTMAQCVGAVCGAGLARAMHGGGQYARHGGGANELAAGYSAGAGVVAEMVGTFVLVYTV 175          

HSP 2 Score: 49.6766 bits (117), Expect = 6.554e-48
Identity = 22/30 (73.33%), Postives = 22/30 (73.33%), Query Frame = 1
Query:  175 KDYTDPPPEPLFDAVELTKWSFYRALIAEF 264
            KDY DPPP PL D  EL KWS YRA IAEF
Sbjct:   12 KDYQDPPPAPLVDTGELGKWSLYRAAIAEF 41          
BLAST of DR403828 vs. ExPASy Swiss-Prot
Match: PIP11_MAIZE (Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 2.673e-46
Identity = 79/117 (67.52%), Postives = 91/117 (77.78%), Query Frame = 2
Query:  332 AKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 682
            +K+   CA VGI GIAW+FGGMI  LVYCTAGISG HINPAVTFGLFLARK+SL RAV Y++ QCLGAI G G+VK FQ+  Y   GG  N +A GY+ G GL AEI+GTF+LVYTV
Sbjct:   78 SKSTSKCATVGIQGIAWSFGGMILALVYCTAGISG-HINPAVTFGLFLARKLSLTRAVFYIIMQCLGAICGRGVVKGFQQGLYMGNGGRRNVVAPGYTKGDGLGAEIVGTFILVYTV 193          

HSP 2 Score: 48.9062 bits (115), Expect = 2.673e-46
Identity = 25/47 (53.19%), Postives = 29/47 (61.70%), Query Frame = 1
Query:  145 GVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFINPALSL 285
            G A  G+   KDY +PPP PLF+  EL  WSFYR  IAEF+   L L
Sbjct:   22 GTAAQGT-DDKDYKEPPPAPLFEPGELKSWSFYRPGIAEFVATFLFL 67          
The following BLAST results are available for this feature:
BLAST of DR403828 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
PIP13_MAIZE3.011e-5170.09Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2... [more]
PIP11_VICFA3.926e-5176.58Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1[more]
PIP11_ARATH3.926e-5176.58Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1... [more]
PIP13_ORYSJ6.669e-5172.41Aquaporin PIP 1-3 OS=Oryza sativa subsp. japonica ... [more]
PIP1_SOLLC1.133e-5075.68Probable aquaporin PIP-type pTOM75 OS=Solanum lyco... [more]
PIP27_ORYSJ1.477e-5065.08Probable aquaporin PIP2-7 OS=Oryza sativa subsp. j... [more]
PIP2_PEA5.558e-5071.43Probable aquaporin PIP-type 7a OS=Pisum sativum GN... [more]
PIP16_MAIZE9.439e-5068.38Aquaporin PIP1-6 OS=Zea mays GN=PIP1-6 PE=2 SV=1[more]
PIP28_ORYSJ6.554e-4866.67Probable aquaporin PIP2-8 OS=Oryza sativa subsp. j... [more]
PIP11_MAIZE2.673e-4667.52Aquaporin PIP1-1 OS=Zea mays GN=PIP1-1 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246G12 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246G12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403828 ID=DR403828; Name=DR403828; organism=Citrus sinensis; type=EST; length=684bp
CGGCCGGGGAGCAAAAAAAAAGAAAAATNNNNAAGAAAAAGGAAAAGGCT
TCTCTCTCGTTGTGCTTGTGGCTTTGCAGTGCTCTCAGTTTTCTCTGTTT
CTCTCCAAATCATTGTTACTGGTTTTCCAATGGCGAAGGACACTGGGGTG
GCAGAGCACGGCTCATATTCAGCCAAGGACTACACGGACCCACCGCCGGA
GCCGCTATTCGACGCCGTGGAGCTGACCAAATGGTCATTCTACAGAGCCT
TGATAGCTGAGTTCATCAACCCTGCTCTTTCTTTACGTCACTGTCTTGAC
TGTCATTGGCTACAAAAGCCAGACCGATCCCGCCAAGAACGTCGACGGCT
GTGCTGGCGTCGGCATCCTCGGCATCGCCTGGGCCTTCGGTGGCATGATC
TTTGTCCTCGTTTACTGCACCGCCGGTATCTCAGGTGGTCACATTAACCC
GGCAGTGACGTTCGGACTATTCTTGGCCCGCAAGGTGTCGTTGGTCCGTG
CTGTGATGTACATGGTGGCGCAGTGCCTTGGTGCTATCTCCGGTGTTGGG
TTGGTCAAGGCTTTCCAAAAATCTTACTACACAAGGTACGGAGGTGGGGC
CAACGAGCTGGCCGATGGGTACAGCACCGGCGTTGGATTGGCCGCCGAGA
TCATCGGCACCTTTGTCTTGGTTTACACTGTCTT
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