DR403828

Overview
NameDR403828
Unique NameDR403828
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length684
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403828 vs. ExPASy Swiss-Prot
Match: AQP1_HUMAN (Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3)

HSP 1 Score: 86.2705 bits (212), Expect = 5.935e-17
Identity = 47/103 (45.63%), Postives = 63/103 (61.17%), Query Frame = 2
Query:  374 IAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 682
            ++ AFG  I  L      ISG H+NPAVT GL L+ ++S+ RA+MY++AQC+GAI    ++     S  T    G N+LADG ++G GL  EIIGT  LV  V
Sbjct:   52 VSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSS-LTGNSLGRNDLADGVNSGQGLGIEIIGTLQLVLCV 153          

HSP 2 Score: 21.9422 bits (45), Expect = 5.935e-17
Identity = 10/22 (45.45%), Postives = 14/22 (63.64%), Query Frame = 1
Query:  214 AVELTKWSFYRALIAEFINPAL 279
            A E  K  F+RA++AEF+   L
Sbjct:    2 ASEFKKKLFWRAVVAEFLATTL 23          
BLAST of DR403828 vs. ExPASy Swiss-Prot
Match: AQP1_MOUSE (Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3)

HSP 1 Score: 84.3445 bits (207), Expect = 1.695e-16
Identity = 46/103 (44.66%), Postives = 62/103 (60.19%), Query Frame = 2
Query:  374 IAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 682
            ++ AFG  I  L      ISG H+NPAVT GL L+ ++S++RAVMY++AQC+GAI    ++     S       G N+LA G ++G GL  EIIGT  LV  V
Sbjct:   52 VSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLVDN-SLGRNDLAHGVNSGQGLGIEIIGTLQLVLCV 153          

HSP 2 Score: 22.3274 bits (46), Expect = 1.695e-16
Identity = 9/18 (50.00%), Postives = 14/18 (77.78%), Query Frame = 1
Query:  214 AVELTKWSFYRALIAEFI 267
            A E+ K  F+RA++AEF+
Sbjct:    2 ASEIKKKLFWRAVVAEFL 19          
BLAST of DR403828 vs. ExPASy Swiss-Prot
Match: AQP1_CANFA (Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3)

HSP 1 Score: 84.7297 bits (208), Expect = 2.203e-16
Identity = 47/103 (45.63%), Postives = 62/103 (60.19%), Query Frame = 2
Query:  374 IAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 682
            ++ AFG  I  L      ISG H+NPAVT GL L+ ++S++RAVMY++AQC+GAI    ++     S       G NELA G ++G GL  EIIGT  LV  V
Sbjct:   54 VSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVATAILSGITSSLPDN-SLGRNELAPGVNSGQGLGIEIIGTLQLVLCV 155          

HSP 2 Score: 21.557 bits (44), Expect = 2.203e-16
Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 1
Query:  214 AVELTKWSFYRALIAEFI 267
            A E  K  F+RA++AEF+
Sbjct:    2 ASEFKKKLFWRAVVAEFL 19          
BLAST of DR403828 vs. ExPASy Swiss-Prot
Match: AQP1_PONAB (Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3)

HSP 1 Score: 83.9593 bits (206), Expect = 3.722e-16
Identity = 46/103 (44.66%), Postives = 62/103 (60.19%), Query Frame = 2
Query:  374 IAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 682
            ++ AFG  I  L      ISG H+NPAVT GL L+ ++S+ RA+MY++AQC+GAI    ++     S       G N+LADG ++G GL  EIIGT  LV  V
Sbjct:   52 VSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISIFRALMYIIAQCVGAIVATAILSGITSS-LPGNSLGRNDLADGVNSGQGLGIEIIGTLQLVLCV 153          

HSP 2 Score: 21.557 bits (44), Expect = 3.722e-16
Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 1
Query:  214 AVELTKWSFYRALIAEFI 267
            A E  K  F+RA++AEF+
Sbjct:    2 ASEFKKKLFWRAVVAEFL 19          
BLAST of DR403828 vs. ExPASy Swiss-Prot
Match: AQP1_RAT (Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4)

HSP 1 Score: 83.1889 bits (204), Expect = 3.722e-16
Identity = 46/103 (44.66%), Postives = 62/103 (60.19%), Query Frame = 2
Query:  374 IAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 682
            ++ AFG  I  L      ISG H+NPAVT GL L+ ++S++RAVMY++AQC+GAI    ++     S       G N+LA G ++G GL  EIIGT  LV  V
Sbjct:   52 VSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAVMYIIAQCVGAIVASAILSGITSSLLEN-SLGRNDLARGVNSGQGLGIEIIGTLQLVLCV 153          

HSP 2 Score: 22.3274 bits (46), Expect = 3.722e-16
Identity = 9/18 (50.00%), Postives = 14/18 (77.78%), Query Frame = 1
Query:  214 AVELTKWSFYRALIAEFI 267
            A E+ K  F+RA++AEF+
Sbjct:    2 ASEIKKKLFWRAVVAEFL 19          
BLAST of DR403828 vs. ExPASy Swiss-Prot
Match: AQP1_PIG (Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 1.794e-15
Identity = 46/103 (44.66%), Postives = 60/103 (58.25%), Query Frame = 2
Query:  374 IAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 682
            ++ AFG  I  L      ISG H+NPAVT GL L+ ++S++RAVMY++AQC+GAI    ++     S       G N LA G  +G GL  EIIGT  LV  V
Sbjct:   54 VSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAVMYIIAQCVGAIVATAILSGITSS-LPGNSLGLNSLAPGVDSGQGLGIEIIGTLQLVLCV 155          

HSP 2 Score: 21.557 bits (44), Expect = 1.794e-15
Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 1
Query:  214 AVELTKWSFYRALIAEFI 267
            A E  K  F+RA++AEF+
Sbjct:    2 ASEFKKKIFWRAVVAEFL 19          
BLAST of DR403828 vs. ExPASy Swiss-Prot
Match: AQP1_BOVIN (Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 1.794e-15
Identity = 45/103 (43.69%), Postives = 61/103 (59.22%), Query Frame = 2
Query:  374 IAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 682
            ++ AFG  I  L      ISG H+NPAVT GL L+ ++S++RA+MY++AQC+GAI    ++     S       G N LA G ++G GL  EIIGT  LV  V
Sbjct:   54 VSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDN-SLGLNALAPGVNSGQGLGIEIIGTLQLVLCV 155          

HSP 2 Score: 21.557 bits (44), Expect = 1.794e-15
Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 1
Query:  214 AVELTKWSFYRALIAEFI 267
            A E  K  F+RA++AEF+
Sbjct:    2 ASEFKKKLFWRAVVAEFL 19          
BLAST of DR403828 vs. ExPASy Swiss-Prot
Match: AQP1_SHEEP (Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3)

HSP 1 Score: 80.8777 bits (198), Expect = 3.030e-15
Identity = 45/103 (43.69%), Postives = 61/103 (59.22%), Query Frame = 2
Query:  374 IAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 682
            ++ AFG  I  L      ISG H+NPAVT GL L+ ++S++RA+MY++AQC+GAI    ++     S       G N LA G ++G GL  EIIGT  LV  V
Sbjct:   54 VSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLSCQISILRAIMYIIAQCVGAIVATVILSGITSSLPDN-SLGLNALAPGVNSGQGLGIEIIGTLQLVLCV 155          

HSP 2 Score: 21.557 bits (44), Expect = 3.030e-15
Identity = 9/18 (50.00%), Postives = 13/18 (72.22%), Query Frame = 1
Query:  214 AVELTKWSFYRALIAEFI 267
            A E  K  F+RA++AEF+
Sbjct:    2 ASEFKKKLFWRAVVAEFL 19          
BLAST of DR403828 vs. ExPASy Swiss-Prot
Match: AQP_ANOGA (Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP008842 PE=3 SV=4)

HSP 1 Score: 80.4925 bits (197), Expect = 9.159e-15
Identity = 43/103 (41.75%), Postives = 62/103 (60.19%), Query Frame = 2
Query:  374 IAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 682
            IA+ FG ++  L      +SG HINPAVT GL +   VS+++   Y+V+QC+GAI+G  ++KA   S     G G   +A G STG G+  E + TF+LV+ V
Sbjct:   57 IAFTFGLVVATLAQAFGHVSGCHINPAVTIGLIVTADVSILKGAFYIVSQCIGAIAGAAVIKAATPSEVVG-GLGVTGIAPGLSTGQGVLIEALITFMLVFVV 158          
BLAST of DR403828 vs. ExPASy Swiss-Prot
Match: AQPA_RANES (Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.459e-14
Identity = 42/106 (39.62%), Postives = 61/106 (57.55%), Query Frame = 2
Query:  365 ILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 682
            I+ ++ AFG  I  +      +SG H+NPAVT G  L+ ++S+++AVMY++AQCLGA+    ++     S       G N L+ G S G GL  EI+ TF LV  V
Sbjct:   53 IVKVSLAFGISIATMAQSVGHVSGAHLNPAVTLGCLLSCQISILKAVMYIIAQCLGAVVATAILSGI-TSGLENNSLGLNGLSPGVSAGQGLGVEILVTFQLVLCV 157          

HSP 2 Score: 23.0978 bits (48), Expect = 1.459e-14
Identity = 10/18 (55.56%), Postives = 14/18 (77.78%), Query Frame = 1
Query:  214 AVELTKWSFYRALIAEFI 267
            A E  K +F+RA+IAEF+
Sbjct:    2 ASEFKKKAFWRAVIAEFL 19          
The following BLAST results are available for this feature:
BLAST of DR403828 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
AQP1_HUMAN5.935e-1745.63Aquaporin-1 OS=Homo sapiens GN=AQP1 PE=1 SV=3[more]
AQP1_MOUSE1.695e-1644.66Aquaporin-1 OS=Mus musculus GN=Aqp1 PE=1 SV=3[more]
AQP1_CANFA2.203e-1645.63Aquaporin-1 OS=Canis familiaris GN=AQP1 PE=2 SV=3[more]
AQP1_PONAB3.722e-1644.66Aquaporin-1 OS=Pongo abelii GN=AQP1 PE=2 SV=3[more]
AQP1_RAT3.722e-1644.66Aquaporin-1 OS=Rattus norvegicus GN=Aqp1 PE=2 SV=4[more]
AQP1_PIG1.794e-1544.66Aquaporin-1 OS=Sus scrofa GN=AQP1 PE=2 SV=3[more]
AQP1_BOVIN1.794e-1543.69Aquaporin-1 OS=Bos taurus GN=AQP1 PE=1 SV=3[more]
AQP1_SHEEP3.030e-1543.69Aquaporin-1 OS=Ovis aries GN=AQP1 PE=2 SV=3[more]
AQP_ANOGA9.159e-1541.75Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP0088... [more]
AQPA_RANES1.459e-1439.62Aquaporin FA-CHIP OS=Rana esculenta GN=AQPA PE=2 S... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCSAH-PNP1246G12 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246G12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403828 ID=DR403828; Name=DR403828; organism=Citrus sinensis; type=EST; length=684bp
CGGCCGGGGAGCAAAAAAAAAGAAAAATNNNNAAGAAAAAGGAAAAGGCT
TCTCTCTCGTTGTGCTTGTGGCTTTGCAGTGCTCTCAGTTTTCTCTGTTT
CTCTCCAAATCATTGTTACTGGTTTTCCAATGGCGAAGGACACTGGGGTG
GCAGAGCACGGCTCATATTCAGCCAAGGACTACACGGACCCACCGCCGGA
GCCGCTATTCGACGCCGTGGAGCTGACCAAATGGTCATTCTACAGAGCCT
TGATAGCTGAGTTCATCAACCCTGCTCTTTCTTTACGTCACTGTCTTGAC
TGTCATTGGCTACAAAAGCCAGACCGATCCCGCCAAGAACGTCGACGGCT
GTGCTGGCGTCGGCATCCTCGGCATCGCCTGGGCCTTCGGTGGCATGATC
TTTGTCCTCGTTTACTGCACCGCCGGTATCTCAGGTGGTCACATTAACCC
GGCAGTGACGTTCGGACTATTCTTGGCCCGCAAGGTGTCGTTGGTCCGTG
CTGTGATGTACATGGTGGCGCAGTGCCTTGGTGCTATCTCCGGTGTTGGG
TTGGTCAAGGCTTTCCAAAAATCTTACTACACAAGGTACGGAGGTGGGGC
CAACGAGCTGGCCGATGGGTACAGCACCGGCGTTGGATTGGCCGCCGAGA
TCATCGGCACCTTTGTCTTGGTTTACACTGTCTT
back to top