DR403828

Overview
NameDR403828
Unique NameDR403828
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length684
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403828 vs. ExPASy Swiss-Prot
Match: AQP5_MOUSE (Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.602e-11
Identity = 39/106 (36.79%), Postives = 58/106 (54.72%), Query Frame = 2
Query:  365 ILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 682
            IL I+ AFG  I  L      +SGGHINPA+T  L +  ++SL+RA+ Y+ AQ +GAI+G G++         R     N L++  + G  +  E+I TF L   +
Sbjct:   42 ILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAIFYVAAQLVGAIAGAGILYWLAPG-NARGNLAVNALSNNTTPGKAVVVELILTFQLALCI 146          
BLAST of DR403828 vs. ExPASy Swiss-Prot
Match: TIP11_MAIZE (Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.704e-11
Identity = 43/107 (40.19%), Postives = 56/107 (52.34%), Query Frame = 2
Query:  362 GILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 682
            G++  A A    +FV V   A ISGGH+NPAVTFG F+   ++L R ++Y VAQ LG+     L++       T   G       G S    L  EI+ TF LVYTV
Sbjct:   57 GLIAAAVAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWVAQLLGSTVACFLLRFSTGGQATGTFG-----LTGVSVWEALVLEIVMTFGLVYTV 158          
BLAST of DR403828 vs. ExPASy Swiss-Prot
Match: AQP_HAEIX (Aquaporin OS=Haematobia irritans exigua PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 4.704e-11
Identity = 34/103 (33.01%), Postives = 56/103 (54.37%), Query Frame = 2
Query:  374 IAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 682
            IA+ FG  +  L      ISG HINPAVT G  +  ++S++++V+Y+  QC+GAI+G  ++K       +    G +  +   + G  +  E + TF+LV  V
Sbjct:   57 IAFTFGLTVATLAQAIGHISGCHINPAVTVGFLIVGEMSIIKSVLYIAVQCVGAIAGAAVIKVGVSEAVSGLDLGVSSFSSTLTVGQAVLIEALITFILVVVV 159          
BLAST of DR403828 vs. ExPASy Swiss-Prot
Match: MIP_BOVIN (Lens fiber major intrinsic protein OS=Bos taurus GN=MIP PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.833e-11
Identity = 40/106 (37.74%), Postives = 55/106 (51.89%), Query Frame = 2
Query:  365 ILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 682
            +L +A AFG  +  LV     ISG H+NPAVTF   +  ++SL+RA+ YMVAQ LGA++G  ++ +       R     N L  G S G     EI  T   V  +
Sbjct:   41 VLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMVAQLLGAVAGAAVLYSVTPP-AVRGNLALNTLHPGVSVGQATIVEIFLTLQFVLCI 145          

HSP 2 Score: 20.7866 bits (42), Expect = 4.833e-11
Identity = 9/15 (60.00%), Postives = 11/15 (73.33%), Query Frame = 1
Query:  220 ELTKWSFYRALIAEF 264
            EL   SF+RA+ AEF
Sbjct:    3 ELRSASFWRAICAEF 17          
BLAST of DR403828 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.144e-11
Identity = 40/107 (37.38%), Postives = 57/107 (53.27%), Query Frame = 2
Query:  362 GILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 682
            G++ +A A    +FV V   A +SGGH+NPAVT GL +   ++++  + Y +AQCLG+     L+K           G    +A G     G+  EII TF LVYTV
Sbjct:   55 GLVAVAVAHAFALFVGVSMAANVSGGHLNPAVTLGLAVGGNITILTGLFYWIAQCLGSTVACLLLKFVTNGLSVPTHG----VAAGMDAIQGVVMEIIITFALVYTV 157          
BLAST of DR403828 vs. ExPASy Swiss-Prot
Match: TIP11_ORYSJ (Probable aquaporin TIP1-1 OS=Oryza sativa subsp. japonica GN=TIP1-1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.144e-11
Identity = 42/107 (39.25%), Postives = 56/107 (52.34%), Query Frame = 2
Query:  362 GILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 682
            G++  A A    +FV V   A ISGGH+NPAVTFG F+   ++L R ++Y +AQ LG+     L++       T   G       G S    L  EI+ TF LVYTV
Sbjct:   57 GLIAAAVAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWIAQLLGSTVACFLLRFSTGGLATGTFG-----LTGVSVWEALVLEIVMTFGLVYTV 158          
BLAST of DR403828 vs. ExPASy Swiss-Prot
Match: AQP5_HUMAN (Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.144e-11
Identity = 40/106 (37.74%), Postives = 56/106 (52.83%), Query Frame = 2
Query:  365 ILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 682
            IL IA AFG  I  L      +SGGHINPA+T  L +  ++SL+RA  Y+ AQ +GAI+G G++         R     N L +  + G  +  E+I TF L   +
Sbjct:   42 ILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGV-APLNARGNLAVNALNNNTTQGQAMVVELILTFQLALCI 146          
BLAST of DR403828 vs. ExPASy Swiss-Prot
Match: MIP_RABIT (Lens fiber major intrinsic protein OS=Oryctolagus cuniculus GN=MIP PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 6.274e-11
Identity = 39/106 (36.79%), Postives = 55/106 (51.89%), Query Frame = 2
Query:  365 ILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTV 682
            +L +A AFG  +  LV     ISG H+NPAVTF   +  ++SL+RA+ YM AQ LGA++G  ++ +   +   R     N L  G S G     EI  T   V  +
Sbjct:   41 VLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVGSQMSLLRAICYMAAQLLGAVAGAAVLYSVTPA-AVRGNLALNTLHPGVSLGQATTVEIFLTLQFVLCI 145          

HSP 2 Score: 21.1718 bits (43), Expect = 6.274e-11
Identity = 9/15 (60.00%), Postives = 11/15 (73.33%), Query Frame = 1
Query:  220 ELTKWSFYRALIAEF 264
            EL   SF+RA+ AEF
Sbjct:    3 ELRSASFWRAIFAEF 17          
BLAST of DR403828 vs. ExPASy Swiss-Prot
Match: AQPZ1_AGRT5 (Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=aqpZ1 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.024e-11
Identity = 47/113 (41.59%), Postives = 58/113 (51.33%), Query Frame = 2
Query:  356 GVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGA-ISGVGLVKAFQKSYYTRYGG-GANELAD----GYSTGVGLAAEIIGT-FVLV 673
            G+G LG+A+AFG  +  + Y   GISGGH NPAV+ GL +A K      V Y+VAQ LGA ++   L            GG  AN   +    GYS    L  EII T F LV
Sbjct:   33 GIGFLGVAFAFGLTVLTMAYAVGGISGGHFNPAVSVGLTVAGKFPAANLVPYIVAQVLGAVVAAAALYVILTGKAGAEIGGFAANGYGEHSPGGYSLLSALLIEIILTAFFLV 145          
The following BLAST results are available for this feature:
BLAST of DR403828 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
AQP5_MOUSE3.602e-1136.79Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1[more]
TIP11_MAIZE4.704e-1140.19Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1[more]
AQP_HAEIX4.704e-1133.01Aquaporin OS=Haematobia irritans exigua PE=2 SV=1[more]
MIP_BOVIN4.833e-1137.74Lens fiber major intrinsic protein OS=Bos taurus G... [more]
TIP_ANTMA6.144e-1137.38Probable aquaporin TIP-type OS=Antirrhinum majus G... [more]
TIP11_ORYSJ6.144e-1139.25Probable aquaporin TIP1-1 OS=Oryza sativa subsp. j... [more]
AQP5_HUMAN6.144e-1137.74Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1[more]
MIP_RABIT6.274e-1136.79Lens fiber major intrinsic protein OS=Oryctolagus ... [more]
AQPZ1_AGRT58.024e-1141.59Aquaporin Z 1 OS=Agrobacterium tumefaciens (strain... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246G12 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246G12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403828 ID=DR403828; Name=DR403828; organism=Citrus sinensis; type=EST; length=684bp
CGGCCGGGGAGCAAAAAAAAAGAAAAATNNNNAAGAAAAAGGAAAAGGCT
TCTCTCTCGTTGTGCTTGTGGCTTTGCAGTGCTCTCAGTTTTCTCTGTTT
CTCTCCAAATCATTGTTACTGGTTTTCCAATGGCGAAGGACACTGGGGTG
GCAGAGCACGGCTCATATTCAGCCAAGGACTACACGGACCCACCGCCGGA
GCCGCTATTCGACGCCGTGGAGCTGACCAAATGGTCATTCTACAGAGCCT
TGATAGCTGAGTTCATCAACCCTGCTCTTTCTTTACGTCACTGTCTTGAC
TGTCATTGGCTACAAAAGCCAGACCGATCCCGCCAAGAACGTCGACGGCT
GTGCTGGCGTCGGCATCCTCGGCATCGCCTGGGCCTTCGGTGGCATGATC
TTTGTCCTCGTTTACTGCACCGCCGGTATCTCAGGTGGTCACATTAACCC
GGCAGTGACGTTCGGACTATTCTTGGCCCGCAAGGTGTCGTTGGTCCGTG
CTGTGATGTACATGGTGGCGCAGTGCCTTGGTGCTATCTCCGGTGTTGGG
TTGGTCAAGGCTTTCCAAAAATCTTACTACACAAGGTACGGAGGTGGGGC
CAACGAGCTGGCCGATGGGTACAGCACCGGCGTTGGATTGGCCGCCGAGA
TCATCGGCACCTTTGTCTTGGTTTACACTGTCTT
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