CX069372
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX069372 vs. ExPASy Swiss-Prot
Match: PSBB_ATRBE (Photosystem II CP47 chlorophyll apoprotein OS=Atropa belladonna GN=psbB PE=3 SV=1) HSP 1 Score: 502.671 bits (1293), Expect = 9.229e-142 Identity = 242/257 (94.16%), Postives = 243/257 (94.55%), Query Frame = 2 Query: 2 DRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 772 +RTGK SLDLPKIFGIHLFLSGVACFGFG FHVTGLYGPGIWVSDPYGLTGKVQ VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP Sbjct: 126 ERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQPVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 382
BLAST of CX069372 vs. ExPASy Swiss-Prot
Match: PSBB_DAUCA (Photosystem II CP47 chlorophyll apoprotein OS=Daucus carota GN=psbB PE=3 SV=1) HSP 1 Score: 502.286 bits (1292), Expect = 1.205e-141 Identity = 241/257 (93.77%), Postives = 244/257 (94.94%), Query Frame = 2 Query: 2 DRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 772 +RTGK SLDLPKIFGIHLFL+G+ACFGFG FHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP Sbjct: 126 ERTGKPSLDLPKIFGIHLFLAGLACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 382
BLAST of CX069372 vs. ExPASy Swiss-Prot
Match: PSBB_COFAR (Photosystem II CP47 chlorophyll apoprotein OS=Coffea arabica GN=psbB PE=3 SV=1) HSP 1 Score: 502.286 bits (1292), Expect = 1.205e-141 Identity = 241/257 (93.77%), Postives = 243/257 (94.55%), Query Frame = 2 Query: 2 DRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 772 +RTGK SLDLPKIFGIHLFLSGVACFGFG FHVTGLYGPGIWVSDPYGLTGKVQ VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIA+GWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP Sbjct: 126 ERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQPVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAIGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 382
BLAST of CX069372 vs. ExPASy Swiss-Prot
Match: PSBB_VITVI (Photosystem II CP47 chlorophyll apoprotein OS=Vitis vinifera GN=psbB PE=3 SV=1) HSP 1 Score: 501.901 bits (1291), Expect = 1.574e-141 Identity = 241/257 (93.77%), Postives = 243/257 (94.55%), Query Frame = 2 Query: 2 DRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 772 +RTGK SLDLPKIFGIHLFLSG+ACFGFG FHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRV AGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP Sbjct: 126 ERTGKPSLDLPKIFGIHLFLSGLACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 382
BLAST of CX069372 vs. ExPASy Swiss-Prot
Match: PSBB_IPOPU (Photosystem II CP47 chlorophyll apoprotein OS=Ipomoea purpurea GN=psbB PE=3 SV=1) HSP 1 Score: 501.516 bits (1290), Expect = 2.056e-141 Identity = 241/257 (93.77%), Postives = 243/257 (94.55%), Query Frame = 2 Query: 2 DRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 772 +RTGK SLDLPKIFGIHLFLSG+ACFGFG FHVTGLYGPGIWVSDPYGLTGKVQ VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP Sbjct: 126 ERTGKPSLDLPKIFGIHLFLSGLACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQPVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 382
BLAST of CX069372 vs. ExPASy Swiss-Prot
Match: PSBB_GOSHI (Photosystem II CP47 chlorophyll apoprotein OS=Gossypium hirsutum GN=psbB PE=3 SV=1) HSP 1 Score: 501.516 bits (1290), Expect = 2.056e-141 Identity = 241/257 (93.77%), Postives = 243/257 (94.55%), Query Frame = 2 Query: 2 DRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 772 +RTGK SLDLPKIFGIHLFLSGVACFGFG FHVTGLYGPGIWVSDPYGLTGKVQ VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDK+GRELFVRRMPTFFETFPVVLVDGDGIVRADVP Sbjct: 126 ERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQPVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKDGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 382
BLAST of CX069372 vs. ExPASy Swiss-Prot
Match: PSBB_LACSA (Photosystem II CP47 chlorophyll apoprotein OS=Lactuca sativa GN=psbB PE=3 SV=1) HSP 1 Score: 501.13 bits (1289), Expect = 2.685e-141 Identity = 240/257 (93.39%), Postives = 244/257 (94.94%), Query Frame = 2 Query: 2 DRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 772 +RTGK SLDLPKIFGIHLFL+GVACFGFG FHVTGLYGPGIWVSDPYGLTGKVQ+VNP+WGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP Sbjct: 126 ERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQAVNPSWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 382
BLAST of CX069372 vs. ExPASy Swiss-Prot
Match: PSBB_JASNU (Photosystem II CP47 chlorophyll apoprotein OS=Jasminum nudiflorum GN=psbB PE=3 SV=1) HSP 1 Score: 501.13 bits (1289), Expect = 2.685e-141 Identity = 241/257 (93.77%), Postives = 243/257 (94.55%), Query Frame = 2 Query: 2 DRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 772 +RTGK SLDLPKIFGIHLFLSGVACFGFG FHVTGLYGPGIWVSDPYGLTGKVQ VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAEN+SLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP Sbjct: 126 ERTGKPSLDLPKIFGIHLFLSGVACFGFGVFHVTGLYGPGIWVSDPYGLTGKVQPVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENKSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 382
BLAST of CX069372 vs. ExPASy Swiss-Prot
Match: PSBB_MANES (Photosystem II CP47 chlorophyll apoprotein OS=Manihot esculenta GN=psbB PE=3 SV=1) HSP 1 Score: 500.745 bits (1288), Expect = 3.507e-141 Identity = 241/257 (93.77%), Postives = 243/257 (94.55%), Query Frame = 2 Query: 2 DRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 772 +RTGK SLDLPKIFGIHLFLSGVACFGFG FHVTGLYGPGIWVSDPYGLTGKVQ V+PAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP Sbjct: 126 ERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQPVSPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 382
BLAST of CX069372 vs. ExPASy Swiss-Prot
Match: PSBB_GUIAB (Photosystem II CP47 chlorophyll apoprotein OS=Guizotia abyssinica GN=psbB PE=3 SV=1) HSP 1 Score: 500.745 bits (1288), Expect = 3.507e-141 Identity = 240/257 (93.39%), Postives = 243/257 (94.55%), Query Frame = 2 Query: 2 DRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 772 +RTGK SLDLPKIFGIHLFL+GVACFGFG FHVTGLYGPGIWVSDPYGLTGKVQSVNP+WGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE WSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP Sbjct: 126 ERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQSVNPSWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEVWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 382 The following BLAST results are available for this feature:
BLAST of CX069372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 122
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069372 ID=CX069372; Name=CX069372; organism=Citrus sinensis; type=EST; length=773bpback to top |