CX069372
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX069372 vs. ExPASy Swiss-Prot
Match: PSBB_RANMC (Photosystem II CP47 chlorophyll apoprotein OS=Ranunculus macranthus GN=psbB PE=3 SV=1) HSP 1 Score: 497.664 bits (1280), Expect = 2.969e-140 Identity = 238/257 (92.61%), Postives = 242/257 (94.16%), Query Frame = 2 Query: 2 DRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 772 +RTGK SLDLPKIFGIHLFLSG+ACFGFG FHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRV AGLAEN+SLS+ WSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP Sbjct: 126 ERTGKPSLDLPKIFGIHLFLSGLACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENKSLSDVWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 382
BLAST of CX069372 vs. ExPASy Swiss-Prot
Match: PSBB_CUCSA (Photosystem II CP47 chlorophyll apoprotein OS=Cucumis sativus GN=psbB PE=3 SV=1) HSP 1 Score: 497.664 bits (1280), Expect = 2.969e-140 Identity = 237/257 (92.22%), Postives = 242/257 (94.16%), Query Frame = 2 Query: 2 DRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 772 +RTGK SLDLPKIFGIHLFLSG+ CFGFG FHVTGLYGPGIWVSDPYGLTG+VQ+VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVS GLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHP+FRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP Sbjct: 126 ERTGKPSLDLPKIFGIHLFLSGLGCFGFGAFHVTGLYGPGIWVSDPYGLTGRVQAVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSTGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 382
BLAST of CX069372 vs. ExPASy Swiss-Prot
Match: PSBB_BUXMI (Photosystem II CP47 chlorophyll apoprotein OS=Buxus microphylla GN=psbB PE=3 SV=1) HSP 1 Score: 497.664 bits (1280), Expect = 2.969e-140 Identity = 239/257 (93.00%), Postives = 241/257 (93.77%), Query Frame = 2 Query: 2 DRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 772 +RTGK SLDLPKIFGIHLFLSGVACFGFG FHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRV LAEN+SLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP Sbjct: 126 ERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGVSLAENKSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 382
BLAST of CX069372 vs. ExPASy Swiss-Prot
Match: PSBB_LIRTU (Photosystem II CP47 chlorophyll apoprotein OS=Liriodendron tulipifera GN=psbB PE=3 SV=1) HSP 1 Score: 496.893 bits (1278), Expect = 5.064e-140 Identity = 239/257 (93.00%), Postives = 240/257 (93.39%), Query Frame = 2 Query: 2 DRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 772 +RTGK SLDLPKIFGIHLFLSGVACFGFG FHVTGLYGPGIWVSDPYGLTGKVQSVNPAWG EGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRV AGLAEN SLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEG ELFVRRMPTFFETFPVVLVDGDGIVRADVP Sbjct: 126 ERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGAEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENLSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGHELFVRRMPTFFETFPVVLVDGDGIVRADVP 382
BLAST of CX069372 vs. ExPASy Swiss-Prot
Match: PSBB_CICAR (Photosystem II CP47 chlorophyll apoprotein OS=Cicer arietinum GN=psbB PE=3 SV=1) HSP 1 Score: 496.508 bits (1277), Expect = 6.614e-140 Identity = 237/257 (92.22%), Postives = 242/257 (94.16%), Query Frame = 2 Query: 2 DRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 772 +RTGK SLDLPKIFGIHLFL+GV CFGFG FHVTGL+GPGIWVSDPYGLTG+VQSVNPAWGV+GFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRV AGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP Sbjct: 126 ERTGKPSLDLPKIFGIHLFLAGVGCFGFGAFHVTGLFGPGIWVSDPYGLTGRVQSVNPAWGVDGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 382
BLAST of CX069372 vs. ExPASy Swiss-Prot
Match: PSBB_AETCO (Photosystem II CP47 chlorophyll apoprotein OS=Aethionema cordifolium GN=psbB PE=3 SV=1) HSP 1 Score: 496.508 bits (1277), Expect = 6.614e-140 Identity = 238/257 (92.61%), Postives = 241/257 (93.77%), Query Frame = 2 Query: 2 DRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 772 +RTGK SLDLPKIFGIHLFLSGVACFGFG FHVTGLYGPGIWVSDPYGLTGKVQ VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAEN SLSE WSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHP+FR+KEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP Sbjct: 126 ERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQPVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENPSLSEVWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRNKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 382
BLAST of CX069372 vs. ExPASy Swiss-Prot
Match: PSBB_ACOCL (Photosystem II CP47 chlorophyll apoprotein OS=Acorus calamus GN=psbB PE=3 SV=1) HSP 1 Score: 496.508 bits (1277), Expect = 6.614e-140 Identity = 238/257 (92.61%), Postives = 240/257 (93.39%), Query Frame = 2 Query: 2 DRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 772 +RTGK SLDLPKIFGIHLFLSGVACFGFG FHVTGLYGPGIWVSDPYGLTGKVQ VNPAWG EGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRV AGLAEN SLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHP+FRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP Sbjct: 126 ERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQPVNPAWGAEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENLSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 382
BLAST of CX069372 vs. ExPASy Swiss-Prot
Match: PSBB_ACOAM (Photosystem II CP47 chlorophyll apoprotein OS=Acorus americanus GN=psbB PE=3 SV=1) HSP 1 Score: 496.508 bits (1277), Expect = 6.614e-140 Identity = 238/257 (92.61%), Postives = 240/257 (93.39%), Query Frame = 2 Query: 2 DRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 772 +RTGK SLDLPKIFGIHLFLSGVACFGFG FHVTGLYGPGIWVSDPYGLTGKVQ VNPAWG EGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRV AGLAEN SLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHP+FRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP Sbjct: 126 ERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQPVNPAWGAEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENLSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 382
BLAST of CX069372 vs. ExPASy Swiss-Prot
Match: PSBB_PHAVU (Photosystem II CP47 chlorophyll apoprotein OS=Phaseolus vulgaris GN=psbB PE=3 SV=1) HSP 1 Score: 495.738 bits (1275), Expect = 1.128e-139 Identity = 235/257 (91.44%), Postives = 242/257 (94.16%), Query Frame = 2 Query: 2 DRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 772 +RTGK SLDLPKIFGIHLFL+GVACFGFG FHVTGLYGPGIWVSDPYGLTG++QSVNPAWGVEGFDPFVPGG+ASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRV AGLAENQ+L+EAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEG ELFVRRMPTFFETFPVVLVDGDGIVRADVP Sbjct: 126 ERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLYGPGIWVSDPYGLTGRIQSVNPAWGVEGFDPFVPGGVASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENQNLTEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGHELFVRRMPTFFETFPVVLVDGDGIVRADVP 382
BLAST of CX069372 vs. ExPASy Swiss-Prot
Match: PSBB_LOTJA (Photosystem II CP47 chlorophyll apoprotein OS=Lotus japonicus GN=psbB PE=3 SV=1) HSP 1 Score: 495.738 bits (1275), Expect = 1.128e-139 Identity = 236/257 (91.83%), Postives = 241/257 (93.77%), Query Frame = 2 Query: 2 DRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 772 +RTGK SLDLPKIFGIHLFL+G+ACFGFG FHVTGLYGPGIWVSDPYGLTG+VQ VNPAWGVEGFDPFVPGG+ASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRV AGLAENQS SEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP Sbjct: 126 ERTGKPSLDLPKIFGIHLFLAGLACFGFGAFHVTGLYGPGIWVSDPYGLTGRVQPVNPAWGVEGFDPFVPGGVASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENQSFSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 382 The following BLAST results are available for this feature:
BLAST of CX069372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 122
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069372 ID=CX069372; Name=CX069372; organism=Citrus sinensis; type=EST; length=773bpback to top |