CX069372
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX069372 vs. ExPASy Swiss-Prot
Match: PSBB_CALFG (Photosystem II CP47 chlorophyll apoprotein OS=Calycanthus floridus var. glaucus GN=psbB PE=3 SV=1) HSP 1 Score: 494.582 bits (1272), Expect = 2.513e-139 Identity = 237/257 (92.22%), Postives = 239/257 (93.00%), Query Frame = 2 Query: 2 DRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 772 +RTGK SLDLPKIFGIHLFLSGVACFGFG FHVTGLYGPGIWVSDPYGLTGKVQ VNPAWG EGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRV AGLAEN SLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHP+FRDKEG ELFVRRMPTFFETFPVVLVDGDGIVRADVP Sbjct: 126 ERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQPVNPAWGAEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENLSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGHELFVRRMPTFFETFPVVLVDGDGIVRADVP 382
BLAST of CX069372 vs. ExPASy Swiss-Prot
Match: PSBB_PHAAO (Photosystem II CP47 chlorophyll apoprotein OS=Phalaenopsis aphrodite subsp. formosana GN=psbB PE=3 SV=1) HSP 1 Score: 494.197 bits (1271), Expect = 3.282e-139 Identity = 237/257 (92.22%), Postives = 239/257 (93.00%), Query Frame = 2 Query: 2 DRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 772 +RTGK SLDLPKIFGIHLFLSG+ACFGFG FHVTGLYGPGIWVSDPYGLTGKVQSVNPAWG EGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRV AGLAEN SLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEG ELFVRRMPTFFETFPVVLVD DGIVRADVP Sbjct: 126 ERTGKPSLDLPKIFGIHLFLSGIACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGAEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGAGLAENLSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGHELFVRRMPTFFETFPVVLVDADGIVRADVP 382
BLAST of CX069372 vs. ExPASy Swiss-Prot
Match: PSBB_AMBTC (Photosystem II CP47 chlorophyll apoprotein OS=Amborella trichopoda GN=psbB PE=3 SV=1) HSP 1 Score: 494.197 bits (1271), Expect = 3.282e-139 Identity = 237/257 (92.22%), Postives = 239/257 (93.00%), Query Frame = 2 Query: 2 DRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 772 +RTGK SLDLPKIFGIHLFLSGVACFGFG FHVTGLYGPGIWVSDPYGLTGKVQSVNPAWG EGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRV GLAEN SLSEAWSKIP+KLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEG ELFVRRMPTFFETFPVVLVDGDGIVRADVP Sbjct: 126 ERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGAEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFIVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGTGLAENLSLSEAWSKIPDKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGHELFVRRMPTFFETFPVVLVDGDGIVRADVP 382
BLAST of CX069372 vs. ExPASy Swiss-Prot
Match: PSBB_AETGR (Photosystem II CP47 chlorophyll apoprotein OS=Aethionema grandiflora GN=psbB PE=3 SV=1) HSP 1 Score: 494.197 bits (1271), Expect = 3.282e-139 Identity = 237/257 (92.22%), Postives = 241/257 (93.77%), Query Frame = 2 Query: 2 DRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 772 +RTGK SLDLPKIFGIHLFLSGVACFGFG FHVTGLYGPGIWVSDPYGLTGKVQ VNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTMWYGSATTPIELFGPTRY+WDQGYFQQEIYRRVSAGLAENQSLSE WSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHP+FR+KEGRELFVRRMPTFFETFPVVLVDGDGIVRA VP Sbjct: 126 ERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQPVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYEWDQGYFQQEIYRRVSAGLAENQSLSEVWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRNKEGRELFVRRMPTFFETFPVVLVDGDGIVRAYVP 382
BLAST of CX069372 vs. ExPASy Swiss-Prot
Match: PSBB_PIPCE (Photosystem II CP47 chlorophyll apoprotein OS=Piper cenocladum GN=psbB PE=3 SV=1) HSP 1 Score: 493.812 bits (1270), Expect = 4.287e-139 Identity = 236/257 (91.83%), Postives = 240/257 (93.39%), Query Frame = 2 Query: 2 DRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 772 +RTGK SLDLPKIFGIHLFL+GVACFGFG FHVTGLYGPGIWVSDPYGLTGKVQ VNP+WG EGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAEN SLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHP+FRDKEG ELFVRRMPTFFETFPVVLVDGDGIVRADVP Sbjct: 126 ERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQPVNPSWGAEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENLSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGHELFVRRMPTFFETFPVVLVDGDGIVRADVP 382
BLAST of CX069372 vs. ExPASy Swiss-Prot
Match: PSBB_DIOEL (Photosystem II CP47 chlorophyll apoprotein OS=Dioscorea elephantipes GN=psbB PE=3 SV=1) HSP 1 Score: 493.812 bits (1270), Expect = 4.287e-139 Identity = 237/257 (92.22%), Postives = 240/257 (93.39%), Query Frame = 2 Query: 2 DRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 772 +RTGK SLDLPKIFGIHLFLSG+ACFGFG FHVTGLYGPGIWVSDPYGLTGKVQS+NPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRV GLAEN SLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVD DGIVRADVP Sbjct: 126 ERTGKPSLDLPKIFGIHLFLSGLACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQSINPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGVGLAENLSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDVDGIVRADVP 382
BLAST of CX069372 vs. ExPASy Swiss-Prot
Match: PSBB_ILLOL (Photosystem II CP47 chlorophyll apoprotein OS=Illicium oligandrum GN=psbB PE=3 SV=1) HSP 1 Score: 493.041 bits (1268), Expect = 7.312e-139 Identity = 236/257 (91.83%), Postives = 239/257 (93.00%), Query Frame = 2 Query: 2 DRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 772 +RTGK SLDLPKIFGIHLFLSGVACFGFG FHVTGLYGPGIWVSDPYGLTGKVQSVNPAWG EGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRV GLAEN SLSEAWSKIP+KLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDK+G ELFVRRMPTFFETFPVVLVDGDGIVRADVP Sbjct: 126 ERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGAEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGTGLAENLSLSEAWSKIPDKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKDGHELFVRRMPTFFETFPVVLVDGDGIVRADVP 382
BLAST of CX069372 vs. ExPASy Swiss-Prot
Match: PSBB_CUSRE (Photosystem II CP47 chlorophyll apoprotein OS=Cuscuta reflexa GN=psbB PE=3 SV=1) HSP 1 Score: 492.656 bits (1267), Expect = 9.550e-139 Identity = 234/257 (91.05%), Postives = 238/257 (92.61%), Query Frame = 2 Query: 2 DRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 772 +RTGK SLDLPKIFGIHLFLSGVACFGFG FHVTGLYGPGIWVSDPYGLTGKVQ + P WG EGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSE WSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRD EGRELFVRRMPTFFETFP++LVDGDGIVRADVP Sbjct: 126 ERTGKPSLDLPKIFGIHLFLSGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQPIKPTWGAEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSETWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDNEGRELFVRRMPTFFETFPIILVDGDGIVRADVP 382
BLAST of CX069372 vs. ExPASy Swiss-Prot
Match: PSBB_LOLPR (Photosystem II CP47 chlorophyll apoprotein OS=Lolium perenne GN=psbB PE=3 SV=1) HSP 1 Score: 492.271 bits (1266), Expect = 1.247e-138 Identity = 236/257 (91.83%), Postives = 240/257 (93.39%), Query Frame = 2 Query: 2 DRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 772 DRTGK SLDLPKIFGIHLFL+GVACFGFG FHVTGLYGPGIWVSDPYGLTGKVQ+VNPAWG EGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVS GLAEN SLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHP+FRDKEGRELFVRRMPTFFETFPVVLVD +GIVRADVP Sbjct: 126 DRTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQAVNPAWGAEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSNGLAENLSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGRELFVRRMPTFFETFPVVLVDEEGIVRADVP 382
BLAST of CX069372 vs. ExPASy Swiss-Prot
Match: PSBB_ORYSJ (Photosystem II CP47 chlorophyll apoprotein OS=Oryza sativa subsp. japonica GN=psbB PE=3 SV=1) HSP 1 Score: 491.115 bits (1263), Expect = 2.779e-138 Identity = 236/257 (91.83%), Postives = 240/257 (93.39%), Query Frame = 2 Query: 2 DRTGKRSLDLPKIFGIHLFLSGVACFGFGTFHVTGLYGPGIWVSDPYGLTGKVQSVNPAWGVEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIXXXXXXXXXXXGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVP 772 +RTGK SLDLPKIFGIHLFL+GVACFGFG FHVTGLYGPGIWVSDPYGLTGKVQ+VNPAWG EGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSI GTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVS GLAEN SLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVD +GIVRADVP Sbjct: 126 ERTGKPSLDLPKIFGIHLFLAGVACFGFGAFHVTGLYGPGIWVSDPYGLTGKVQAVNPAWGAEGFDPFVPGGIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVSDGLAENLSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDEEGIVRADVP 382 The following BLAST results are available for this feature:
BLAST of CX069372 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 122
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Sequences
The
following sequences are available for this feature:
EST sequence >CX069372 ID=CX069372; Name=CX069372; organism=Citrus sinensis; type=EST; length=773bpback to top |