CX069369

Overview
NameCX069369
Unique NameCX069369
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length515
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-2cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX069369 vs. ExPASy Swiss-Prot
Match: S22A6_PONAB (Solute carrier family 22 member 6 OS=Pongo abelii GN=SLC22A6 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.128e-14
Identity = 53/165 (32.12%), Postives = 80/165 (48.48%), Query Frame = 1
Query:   13 TTTALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRW 507
            +T   TI++EW L CS   ++ L  + +  G LLG +    LAD  LGR+ +L L+ L  +V+ + T F+ N  IY   R  SG+S A I    + L  E +    R  VG L  + +++G   L  +AY      W  + L  S P   +    + F+ ES RW
Sbjct:  114 STFPSTIVTEWDLVCSHRALRQLAQSLYMVGVLLGAMVFGYLAD-RLGRRKVLILNYLQTAVSGTCTAFAPNFSIYCAFRLLSGMSLAGISLNCMTLNVEWMPIHTRACVGTLIGYVYSLGQFLLAGVAYA--VPHWRHLQLLVSAPFFAFFIYSWFFI-ESARW 274          
BLAST of CX069369 vs. ExPASy Swiss-Prot
Match: S22AK_MOUSE (Solute carrier family 22 member 20 OS=Mus musculus GN=Slc22a20 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 1.925e-14
Identity = 54/161 (33.54%), Postives = 83/161 (51.55%), Query Frame = 1
Query:   28 TIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWL 510
            TI+ EW L C +  ++ L  + + +G L+G      LAD  LGRK  L  S L ++V+ + T +  +   Y + RF  G++ + I   ++ L+ E + T  R + GIL  F FT+G L L  +AY  R   W  +    S P LV+  L   ++ ES RWL
Sbjct:  121 TIVMEWDLVCEARTLRDLAQSIYMSGVLVGAALFGGLADR-LGRKAPLVWSYLQLAVSGAATAYVGSFSAYCVFRFLMGMTFSGIILNSLSLVVEWMPTRGRTVAGILLGFSFTLGQLILAGVAYLIR--PWRWLQFAVSAPFLVFF-LYSWWLPESSRWL 277          
BLAST of CX069369 vs. ExPASy Swiss-Prot
Match: S22A6_PIG (Solute carrier family 22 member 6 OS=Sus scrofa GN=SLC22A6 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 1.925e-14
Identity = 50/167 (29.94%), Postives = 81/167 (48.50%), Query Frame = 1
Query:    7 NPTTTALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRW 507
            +P T   TI++EW L CS   ++ L  + +  G LLG +    LA + LGR+ +L L+ L  +V+ +   F+ N  +Y   R  SG+S A I    + L  E +    R  VG L  + +++G   L  +AY      W  + +  S+P   +    + F+ ES RW
Sbjct:  112 DPGTFPSTIVTEWDLVCSRRALRQLAQSLYMVGVLLGAMIFGYLA-NRLGRRKVLILNYLQTAVSGTCAAFAPNFPVYCAFRLLSGMSLAGISLSCMTLNVEWMPIHTRACVGTLIGYVYSLGQFLLAGVAYA--VPRWRHLQMLVSVPFFAFFIYSWFFI-ESARW 274          
BLAST of CX069369 vs. ExPASy Swiss-Prot
Match: S22A6_RAT (Solute carrier family 22 member 6 OS=Rattus norvegicus GN=Slc22a6 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.514e-14
Identity = 51/165 (30.91%), Postives = 81/165 (49.09%), Query Frame = 1
Query:   13 TTTALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRW 507
            +T   TI++EW L CS    + L  + +  G LLG +    LAD  LGR+ +L L+ L  +V+ +   ++ N  +Y + R  SG+S A+I    + L  E +    R  VG L  + +++G   L  IAY      W  + L  S+P  +     + F+ ES RW
Sbjct:  114 STFPSTIVTEWNLVCSHRAFRQLAQSLYMVGVLLGAMVFGYLAD-RLGRRKVLILNYLQTAVSGTCAAYAPNYTVYCVFRLLSGMSLASIAINCMTLNVEWMPIHTRAYVGTLIGYVYSLGQFLLAGIAYA--VPHWRHLQLVVSVPFFIAFIYSWFFI-ESARW 274          
BLAST of CX069369 vs. ExPASy Swiss-Prot
Match: S22A6_MACFA (Solute carrier family 22 member 6 OS=Macaca fascicularis GN=SLC22A6 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 2.514e-14
Identity = 52/165 (31.52%), Postives = 80/165 (48.48%), Query Frame = 1
Query:   13 TTTALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRW 507
            +T   TI++EW L CS   ++ L  + +  G LLG +    LAD  LGR+ +L L+ L  +V+ +   F+ N  IY   R  SG+S A I    + L  E +    R  VG L  + +++G   L  +AY      W  + L  S+P   +    + F+ ES RW
Sbjct:  114 STFPSTIVTEWDLVCSHRALRQLAQSLYMVGVLLGAMVFGYLAD-RLGRRKVLILNYLQTAVSGTCAAFAPNFPIYCAFRLLSGMSLAGIALNCMTLNVEWMPIHTRACVGTLIGYVYSLGQFLLAGVAYA--VPHWRHLQLLISVPFFAFFIYSWFFI-ESARW 274          
BLAST of CX069369 vs. ExPASy Swiss-Prot
Match: S22A6_MOUSE (Solute carrier family 22 member 6 OS=Mus musculus GN=Slc22a6 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 3.283e-14
Identity = 52/165 (31.52%), Postives = 80/165 (48.48%), Query Frame = 1
Query:   13 TTTALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRW 507
            +T   TI++EW L CS    + L  +    G LLG +    LAD  LGR+ +L L+ L  +V+ +   ++ N  +Y + R  SG+S A+I    + L  E +    R  VG L  + +++G   L  IAY      W  + L  S+P  V     + F+ ES RW
Sbjct:  108 STFPSTIVTEWNLVCSHRAFRQLAQSLFMVGVLLGAMMFGYLAD-RLGRRKVLILNYLQTAVSGTCAAYAPNYTVYCIFRLLSGMSLASIAINCMTLNMEWMPIHTRAYVGTLIGYVYSLGQFLLAGIAYA--VPHWRHLQLAVSVPFFVAFIYSWFFI-ESARW 268          
BLAST of CX069369 vs. ExPASy Swiss-Prot
Match: S22A6_HUMAN (Solute carrier family 22 member 6 OS=Homo sapiens GN=SLC22A6 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.248e-13
Identity = 51/165 (30.91%), Postives = 79/165 (47.88%), Query Frame = 1
Query:   13 TTTALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRW 507
            +T   TI++EW L CS   ++ L  + +  G LLG +    LAD  LGR+ +L L+ L  +V+ +   F+ N  IY   R  SG++ A I    + L  E +    R  VG L  + +++G   L  +AY      W  + L  S P   +    + F+ ES RW
Sbjct:  114 STFPSTIVTEWDLVCSHRALRQLAQSLYMVGVLLGAMVFGYLAD-RLGRRKVLILNYLQTAVSGTCAAFAPNFPIYCAFRLLSGMALAGISLNCMTLNVEWMPIHTRACVGTLIGYVYSLGQFLLAGVAYA--VPHWRHLQLLVSAPFFAFFIYSWFFI-ESARW 274          
BLAST of CX069369 vs. ExPASy Swiss-Prot
Match: S22AL_MOUSE (Solute carrier family 22 member 21 OS=Mus musculus GN=Slc22a21 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.128e-13
Identity = 53/162 (32.72%), Postives = 78/162 (48.15%), Query Frame = 1
Query:   28 TIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILD-SFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWL 510
            TI++EW L C   +   L  +  + G LLG      L+D   GRKN+LFL+    +  + + +FS N  +++LL    G+   +      VL TE +    R +   L    FF  G + LP  AY  R   W  + L  ++P  V  G L+ F+ ESPRWL
Sbjct:  127 TIVTEWDLVCKDDWKAPLTTSFFYVGVLLGSFISGQLSDR-FGRKNILFLTMAMHTGFSFIQVFSVNFEMFTLLYTLVGMGHISNYVAAFVLGTEMLSKSVRIIFATLGVCIFFAFGFMVLPLFAYFIR--EWRRLLLAITLPG-VLCGALWWFIPESPRWL 284          
BLAST of CX069369 vs. ExPASy Swiss-Prot
Match: S22A6_BOVIN (Solute carrier family 22 member 6 OS=Bos taurus GN=SLC22A6 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 2.128e-13
Identity = 50/165 (30.30%), Postives = 78/165 (47.27%), Query Frame = 1
Query:   13 TTTALTIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRW 507
            +T   TI++EW L CS   ++ L  + +  G LLG +    LAD  LGR+ +L  + L  +V+ +   F+ N   Y   RF SG+S A +    + L  E +    R  VG L  + +++G   L  +AY      W  + L  S P   +    + F+ ES RW
Sbjct:  114 STFPSTIVTEWDLVCSHRALRQLAQSLYMMGVLLGAMTFGCLAD-RLGRRKVLIFNYLQTAVSGTCAAFAPNFPAYCAFRFLSGMSTAGVVLNCMTLNVEWMPIHTRAYVGTLTGYVYSLGQFLLAGMAYA--VPHWRYLQLLVSAPFFAFFIYSWFFI-ESARW 274          
BLAST of CX069369 vs. ExPASy Swiss-Prot
Match: S22AK_HUMAN (Solute carrier family 22 member 20 OS=Homo sapiens GN=SLC22A20 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 2.779e-13
Identity = 50/161 (31.06%), Postives = 82/161 (50.93%), Query Frame = 1
Query:   28 TIISEWGLECSSAFIKGLPAASHFTGCLLGIVFLATLADSSLGRKNLLFLSCLTMSVATSLTIFSNNLWIYSLLRFFSGISRATIGTCTIVLLTEKVGTEWRGLVGILDSFFFTIGTLTLPAIAYTNRSSSWTIIYLWTSIPTLVYSGLLYIFVSESPRWL 510
            TI+ EW L C +  ++ L  + +  G L+G     +LAD  LG K  L  S L ++ + + T + ++   Y + RF  G++ + I   ++ L+ E + T  R + GIL  + FT+G L L  +AY  R   W  +    S P L++  L   ++ ES RWL
Sbjct:  121 TIVMEWDLVCEARTLRDLAQSVYMAGVLVGAAVFGSLADR-LGCKGPLVWSYLQLAASGAATAYFSSFSAYCVFRFLMGMTFSGIILNSVSLVVEWMPTRGRTVAGILLGYSFTLGQLILAGVAYLIR--PWRCLQFAISAPFLIFF-LYSWWLPESSRWL 277          
The following BLAST results are available for this feature:
BLAST of CX069369 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 43
Match NameE-valueIdentityDescription
S22A6_PONAB1.128e-1432.12Solute carrier family 22 member 6 OS=Pongo abelii ... [more]
S22AK_MOUSE1.925e-1433.54Solute carrier family 22 member 20 OS=Mus musculus... [more]
S22A6_PIG1.925e-1429.94Solute carrier family 22 member 6 OS=Sus scrofa GN... [more]
S22A6_RAT2.514e-1430.91Solute carrier family 22 member 6 OS=Rattus norveg... [more]
S22A6_MACFA2.514e-1431.52Solute carrier family 22 member 6 OS=Macaca fascic... [more]
S22A6_MOUSE3.283e-1431.52Solute carrier family 22 member 6 OS=Mus musculus ... [more]
S22A6_HUMAN1.248e-1330.91Solute carrier family 22 member 6 OS=Homo sapiens ... [more]
S22AL_MOUSE2.128e-1332.72Solute carrier family 22 member 21 OS=Mus musculus... [more]
S22A6_BOVIN2.128e-1330.30Solute carrier family 22 member 6 OS=Bos taurus GN... [more]
S22AK_HUMAN2.779e-1331.06Solute carrier family 22 member 20 OS=Homo sapiens... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_10A08_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-2 Citrus sinensis cDNA clone UCRCS08-10A08-A16-1-5.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX069369 ID=CX069369; Name=CX069369; organism=Citrus sinensis; type=EST; length=515bp
GATGGAAACCCTACTACTACTGCACTCACAATCATATCCGAATGGGGGCT
TGAATGTTCAAGTGCATTTATCAAAGGCCTGCCAGCAGCATCCCACTTCA
CAGGCTGTCTTCTCGGCATTGTTTTTCTGGCCACGCTCGCGGACTCATCT
CTCGGTCGTAAGAACTTGCTTTTCCTTTCGTGTTTAACGATGTCAGTAGC
AACATCCTTAACTATCTTCTCTAACAACCTCTGGATTTACTCCCTTCTGA
GATTCTTTAGTGGGATTAGCCGAGCCACGATTGGAACATGTACTATCGTG
TTACTAACGGAGAAAGTTGGGACAGAGTGGCGAGGCCTTGTCGGAATTTT
GGATTCCTTCTTCTTCACTATAGGTACATTAACATTGCCGGCAATTGCTT
ATACAAATCGAAGCTCTTCATGGACAATTATCTATTTATGGACTTCGATT
CCGACACTTGTCTACAGTGGGTTGCTTTATATTTTCGTTAGTGAGTCTCC
TAGATGGCTTTTCAT
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