CX054048

Overview
NameCX054048
Unique NameCX054048
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length815
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX054048 vs. ExPASy Swiss-Prot
Match: LDOX_MALDO (Leucoanthocyanidin dioxygenase OS=Malus domestica GN=ANS PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.951e-24
Identity = 74/256 (28.91%), Postives = 125/256 (48.83%), Query Frame = 1
Query:   97 VQALA-SNSKEIPSRYIRPE-----LDD--EQVLADGSLHIPVIDMSKLQDDDDDELAE----FHLACKDSGFLQLINHGVPEKVIEKMKTDIEEFFKLPLE--EKMACAQLPNSIEGYGQAFVVSKDQKLDWGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKL---ASLFEDGIQGIRMNYYPPCAQANRVIGLTPHSDSVAXXXXXXXXXXXXXXXKKYGKWVPVK 813
            V+ LA S    IP  YIRP+     + D  EQ   +    +P ID+ +++ D++   A+       A  D G + L+NHG+ +++++K++   + FF LP+E  EK A  Q    I+GYG     +   +L+W D  F    P + R  S+WP  P        EY+ +L+++   +LK+++  LG++ G+L       E+ +  +++NYYP C Q    +G+  H+D  A                + GKWV  K
Sbjct:   11 VETLAGSGISTIPKEYIRPKDELVNIGDIFEQEKNNEGPQVPTIDLKEIESDNEKVRAKCREKLKKAAVDWGVMHLVNHGISDELMDKVRKAGKAFFDLPIEQKEKYANDQASGKIQGYGSKLANNASGQLEWEDYFFHCVYPEDKRDLSIWPQTPADYIEATAEYAKQLRELATKVLKVLSLGLGLDEGRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHNMVPGLQLFYE-GKWVTAK 265          
BLAST of CX054048 vs. ExPASy Swiss-Prot
Match: FNSI_PETCR (Flavone synthase OS=Petroselinum crispum GN=FNSI PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 8.587e-24
Identity = 68/216 (31.48%), Postives = 109/216 (50.46%), Query Frame = 1
Query:   97 VQALASNSKEIPSRYIRPELDDEQVLADG-SLHIPVIDMSKLQDDDDDELAEFHL----ACKDSGFLQLINHGVPEKVIEKMKTDIEEFFKLPLEEKMACAQLPNSIEGYGQAFVVSKDQKLDWGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLFEDGIQGIRMNYYPPCAQANRVIGLTPHSD 729
            + ALA   K +   ++R E +  +V  +  S  IP+I ++ L DD D    E       AC+D G  Q+++HG+   +I +M     EFF LP EEK+          G+  + V+  D  +DW + +   + P N R  S WP  P   R+T E YS +L  +   LL+++++ +G+E G L     D  Q + +NYYP C Q +  +G+  H+D
Sbjct:    6 ITALAKE-KTLNLDFVRDEDERPKVAYNQFSNEIPIISLAGLDDDSDGRRPEICRKIVKACEDWGIFQVVDHGIDSGLISEMTRLSREFFALPAEEKLEYDTTGGKRGGFTISTVLQGDDAMDWREFVTYFSYPINARDYSRWPKKPEGWRSTTEVYSEKLMVLGAKLLEVLSEAMGLEKGDLTKACVDMEQKVLINYYPTCPQPDLTLGVRRHTD 220          
BLAST of CX054048 vs. ExPASy Swiss-Prot
Match: FLS_MALDO (Flavonol synthase/flavanone 3-hydroxylase OS=Malus domestica GN=FLS PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.122e-23
Identity = 73/217 (33.64%), Postives = 114/217 (52.53%), Query Frame = 1
Query:  112 SNSKEIPSRYIRPELDDEQVLADGS--LHIPVIDMSKLQDDDDDEL-AEFHLACKDSGFLQLINHGVPEKVIEKMKTDIEEFFKLPLEEKMACAQLPN--SIEGYGQAFVVSKDQ----KLDWGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKL-ASLFEDGIQG-IRMNYYPPCAQANRVIGLTPHSD 729
            SN   IP+ +IR E +   +       L +P+ID S   D D+++L  +   A  + G  Q++NH +P +VI K++   +EFF+LP EEK A A+ P+  SIEGYG        +    K  W D LF    P ++     WP  P S R   EEY+  L  V   L +L++  LG+E  +L  +   D ++  +++NYYPPC + +  +G+  H+D
Sbjct:   12 SNEGTIPAEFIRSENEQPGITTVHGKVLEVPIIDFS---DPDEEKLIVQITEASSNWGMYQIVNHDIPSEVISKLQAVGKEFFELPQEEKEAYAKPPDSASIEGYGTKLFKEISEGDTTKKGWVDNLFNKIWPPSVVNYQFWPKNPPSYREANEEYAKHLHNVVEKLFRLLSLGLGLEGQELKKAAGGDNLEYLLKINYYPPCPRPDLALGVVAHTD 225          
BLAST of CX054048 vs. ExPASy Swiss-Prot
Match: FLS_CITUN (Flavonol synthase/flavanone 3-hydroxylase OS=Citrus unshiu GN=FLS PE=1 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 3.263e-23
Identity = 73/226 (32.30%), Postives = 117/226 (51.77%), Query Frame = 1
Query:   82 LPVENVQALASNSKE---IPSRYIRPELDDEQVLADGSLHIPVIDMSKLQDDD---DDELAEFHLACKDSGFLQLINHGVPEKVIEKMKTDIEEFFKLPLEEKMACAQLPNS--IEGYGQAFVVSKDQKLDWGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPG--KLASLFEDGIQGIRMNYYPPCAQANRVIGLTPHSD 729
            + VE VQA+AS S     IP+ +IRPE +     A  + H P  ++  +  DD   D  +     A ++ G  Q+ NHG+P  +I K++   +EFF+LP EEK   ++  ++  ++GYG       + K  W D LF    P +      WP  P S RA  EEY+  +++V   L   ++  LG+E G  K A+  +D    +++NYYPPC + +  +G+  H+D
Sbjct:    1 MEVERVQAIASLSHSNGTIPAEFIRPEKEQP---ASTTYHGPAPEIPTIDLDDPVQDRLVRSIAEASREWGIFQVTNHGIPSDLICKLQAVGKEFFELPQEEKEVYSRPADAKDVQGYGTKLQKEVEGKKSWVDHLFHRVWPPSSINYRFWPKNPPSYRAVNEEYAKYMREVVDKLFTYLSLGLGVEGGVLKEAAGGDDIEYMLKINYYPPCPRPDLALGVVAHTD 223          
BLAST of CX054048 vs. ExPASy Swiss-Prot
Match: FLS1_ARATH (Flavonol synthase/flavanone 3-hydroxylase OS=Arabidopsis thaliana GN=FLS1 PE=1 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.712e-22
Identity = 69/230 (30.00%), Postives = 123/230 (53.48%), Query Frame = 1
Query:   82 LPVENVQALASNS---KEIPSRYIRPELDDEQVLA--DGSLHIPVIDMSKLQDDDDDELAEFHL-ACKDSGFLQLINHGVPEKVIEKMKTDIEEFFKLPLEEKMACAQLPNS--IEGYGQAFVVSKDQKLDWGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLFEDGIQG------IRMNYYPPCAQANRVIGLTPHSD 729
            + VE VQ ++S+S   + IP  +IR E +   +      +  IPV+D+S   D D++ +    + A ++ G  Q++NHG+P ++I +++    +FF+LP  EK + A+  +S  IEGYG       + K  W D LF    P +      WP  P   R   EEY++ ++K++  LL +++  LG++   L    ++G+ G      +++NYYPPC + +  +G+  H+D
Sbjct:    1 MEVERVQDISSSSLLTEAIPLEFIRSEKEQPAITTFRGPTPAIPVVDLS---DPDEESVRRAVVKASEEWGLFQVVNHGIPTELIRRLQDVGRKFFELPSSEKESVAKPEDSKDIEGYGTKLQKDPEGKKAWVDHLFHRIWPPSCVNYRFWPKNPPEYREVNEEYAVHVKKLSETLLGILSDGLGLKRDAL----KEGLGGEMAEYMMKINYYPPCPRPDLALGVPAHTD 223          
BLAST of CX054048 vs. ExPASy Swiss-Prot
Match: FL3H_PETCR (Flavanone 3-dioxygenase OS=Petroselinum crispum GN=FHT PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 5.210e-21
Identity = 61/211 (28.91%), Postives = 106/211 (50.24%), Query Frame = 1
Query:  112 SNSKEIPSRYIRPELDDEQVLADG-SLHIPVIDMSKLQDDDDDELAEFHL----ACKDSGFLQLINHGVPEKVIEKMKTDIEEFFKLPLEEKMACAQLPNSIEGYGQAFVVSKDQKLDWGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLFEDGIQGIRMNYYPPCAQANRVIGLTPHSD 729
            +  K + S+++R E +  ++  +  S  IPVI ++ + DD  D+ ++       AC+D G  Q+++HG+   +I +M     +FF LP EEK+          G+  +  +  +   DW +++   + P   R  S WP  P   R+  E YS EL  +   LL+++++ +G+E   L     D  Q + +NYYP C Q N  +GL  H+D
Sbjct:   10 AQEKTLNSKFVRDEDERPKIAYNKFSDEIPVISLAGIDDDSVDKRSQICRKIVEACEDWGIFQVVDHGIDIDLISEMTRLARQFFALPAEEKLRFDMTGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPIQARDYSRWPDKPEGWRSITEMYSDELMALACKLLEVLSEAMGLEKEGLTKACVDMDQKVIVNYYPKCPQPNLTLGLKRHTD 220          
BLAST of CX054048 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSJ (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.161e-20
Identity = 63/216 (29.17%), Postives = 102/216 (47.22%), Query Frame = 1
Query:  124 EIPSRYIRPELDDEQVLADGSLHIPVIDMSKLQDDDDDEL----AEFHLACKDSGFLQLINHGVPEKVIEKMKTDIEEFFKLPLEEKMACAQLPNSIEGYGQAFVVSKDQKLDWGDMLFL-------LTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLFEDGIQGIRMNYYPPCAQANRVIGLTPHSDSVA 738
            +IP  ++ P  D     A   L +PV+D+  L+D D + L    A+   AC   GF Q+  HGV   +         +FF+LPL EK    ++P ++ GY  A       KL W + L             A+  +++L P      R   ++Y  E++++++ +++L+  +LG+E G     F D    +R NYYPPC +  R +G  PH D  A
Sbjct:   41 KIPEPFVWPNGDARPASA-AELDMPVVDVGVLRDGDAEGLRRAAAQVAAACATHGFFQVSEHGVDAALARAALDGASDFFRLPLAEKRRARRVPGTVSGYTSAHADRFASKLPWKETLSFGFHDRAAAPVVADYFSSTLGPDFAPMGRV-YQKYCEEMKELSLTIMELLELSLGVERGYYREFFADSSSIMRCNYYPPCPEPERTLGTGPHCDPTA 254          
BLAST of CX054048 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSI (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.161e-20
Identity = 63/216 (29.17%), Postives = 102/216 (47.22%), Query Frame = 1
Query:  124 EIPSRYIRPELDDEQVLADGSLHIPVIDMSKLQDDDDDEL----AEFHLACKDSGFLQLINHGVPEKVIEKMKTDIEEFFKLPLEEKMACAQLPNSIEGYGQAFVVSKDQKLDWGDMLFL-------LTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLFEDGIQGIRMNYYPPCAQANRVIGLTPHSDSVA 738
            +IP  ++ P  D     A   L +PV+D+  L+D D + L    A+   AC   GF Q+  HGV   +         +FF+LPL EK    ++P ++ GY  A       KL W + L             A+  +++L P      R   ++Y  E++++++ +++L+  +LG+E G     F D    +R NYYPPC +  R +G  PH D  A
Sbjct:   41 KIPEPFVWPNGDARPASA-AELDMPVVDVGVLRDGDAEGLRRAAAQVAAACATHGFFQVSEHGVDAALARAALDGASDFFRLPLAEKRRARRVPGTVSGYTSAHADRFASKLPWKETLSFGFHDRAAAPVVADYFSSTLGPDFAPMGRV-YQKYCEEMKELSLTIMELLELSLGVERGYYREFFADSSSIMRCNYYPPCPEPERTLGTGPHCDPTA 254          
BLAST of CX054048 vs. ExPASy Swiss-Prot
Match: GAO1B_WHEAT (Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN=GA20ox1B PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.516e-20
Identity = 60/218 (27.52%), Postives = 105/218 (48.17%), Query Frame = 1
Query:  103 ALASNSKEIPSRYIRPELDDEQVLADGSLHIPVIDMSKLQDDDDDELAEFHL----ACKDSGFLQLINHGVPEKVIEKMKTDIEEFFKLPLEEKMACAQLPNSIEGYGQAFVVSKDQKLDWGDMLFLLTQPAN--IRTTSLWPTIPTSLRATIE---EYSLELQKVTIFLLKLMAKNLGIEPGKLASLFEDGIQGIRMNYYPPCAQANRVIGLTPHSD 729
            A+ S   +IPS++I PE +     A   LH+P+ID+  +   D    AE       AC+  GF Q++NHG+  +++      ++ FF +PL EK    + P    GY  +F      KL W + L   + P++  +    +  T+    R   E    Y  E+ ++++ +++++ ++LG+        FE     +R+NYYPPC +    +G  PH D
Sbjct:    9 AVLSGRADIPSQFIWPEGESPTPDAAEELHVPLIDIGGMLSGDPRATAEVTRLVGEACERHGFFQVVNHGIDAELLADAHRCVDAFFTMPLPEKQRALRRPGESCGYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPMETLGTGPHCD 226          
BLAST of CX054048 vs. ExPASy Swiss-Prot
Match: GAO1D_WHEAT (Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.980e-20
Identity = 60/218 (27.52%), Postives = 105/218 (48.17%), Query Frame = 1
Query:  103 ALASNSKEIPSRYIRPELDDEQVLADGSLHIPVIDMSKLQDDDDDELAEFHL----ACKDSGFLQLINHGVPEKVIEKMKTDIEEFFKLPLEEKMACAQLPNSIEGYGQAFVVSKDQKLDWGDMLFLLTQPAN--IRTTSLWPTIPTSLRATIE---EYSLELQKVTIFLLKLMAKNLGIEPGKLASLFEDGIQGIRMNYYPPCAQANRVIGLTPHSD 729
            A+ S   +IPS++I PE +     A   LH+P+ID+  +   D    AE       AC+  GF Q++NHG+  +++      ++ FF +PL EK    + P    GY  +F      KL W + L   + P++  +    +  T+    R   E    Y  E+ ++++ +++++ ++LG+        FE     +R+NYYPPC +    +G  PH D
Sbjct:    9 AVLSGRADIPSQFIWPEGESPTPDAAEELHVPLIDIGGMLSGDPAAAAEVTRLVGEACERHGFFQVVNHGIDAELLADAHRCVDNFFTMPLPEKQRALRHPGESCGYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPLETLGTGPHCD 226          
The following BLAST results are available for this feature:
BLAST of CX054048 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
LDOX_MALDO2.951e-2428.91Leucoanthocyanidin dioxygenase OS=Malus domestica ... [more]
FNSI_PETCR8.587e-2431.48Flavone synthase OS=Petroselinum crispum GN=FNSI P... [more]
FLS_MALDO1.122e-2333.64Flavonol synthase/flavanone 3-hydroxylase OS=Malus... [more]
FLS_CITUN3.263e-2332.30Flavonol synthase/flavanone 3-hydroxylase OS=Citru... [more]
FLS1_ARATH4.712e-2230.00Flavonol synthase/flavanone 3-hydroxylase OS=Arabi... [more]
FL3H_PETCR5.210e-2128.91Flavanone 3-dioxygenase OS=Petroselinum crispum GN... [more]
GAOX2_ORYSJ1.161e-2029.17Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. ja... [more]
GAOX2_ORYSI1.161e-2029.17Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. in... [more]
GAO1B_WHEAT1.516e-2027.52Gibberellin 20 oxidase 1-B OS=Triticum aestivum GN... [more]
GAO1D_WHEAT1.980e-2027.52Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_9H08_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-9H08-O16-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX054048 ID=CX054048; Name=CX054048; organism=Citrus sinensis; type=EST; length=815bp
AAAAGCTAGGAGAATAATACCCCAAAAGAGAGTTGCGAAATGGAAACTGC
AGTTGACAAGAAAAATGTCTACGGCGGTTCTTTACCTGTAGAAAATGTTC
AAGCTCTTGCATCTAATTCCAAGGAAATCCCATCCCGGTACATCCGACCA
GAACTTGATGATGAGCAAGTTCTCGCTGATGGATCACTTCATATTCCAGT
GATTGATATGAGCAAGCTTCAGGACGATGATGATGATGAATTGGCAGAGT
TCCATTTGGCTTGCAAAGACTCGGGCTTCCTCCAGTTGATCAATCACGGG
GTACCAGAAAAAGTAATTGAGAAGATGAAAACTGACATTGAGGAATTCTT
TAAGCTGCCATTAGAGGAGAAGATGGCTTGCGCACAGCTGCCAAATAGCA
TTGAAGGTTATGGGCAAGCTTTCGTTGTCTCCAAGGATCAAAAGCTTGAT
TGGGGAGACATGCTTTTTCTTCTTACTCAACCTGCCAATATTAGAACCAC
GAGTCTCTGGCCTACCATCCCTACTTCTTTAAGAGCAACCATAGAGGAAT
ACTCTTTGGAACTGCAAAAGGTTACAATCTTTCTGTTGAAGTTGATGGCT
AAGAATTTGGGGATTGAACCTGGGAAACTTGCAAGCTTGTTTGAAGATGG
TATACAAGGAATAAGAATGAATTATTATCCACCATGTGCCCAGGCCAACA
GGGTTATTGGTCTCACTCCACACTCTGACTCTGTTGCATTAACATTGTTG
GTTCAAGTGAACCAAGTACAAGGTTTACAGGTAAAGAAATATGGCAAGTG
GGTACCAGTCAAACC
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