CX054048

Overview
NameCX054048
Unique NameCX054048
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length815
Libraries
Library NameType
Ruby Orange Developing Seed cDNA Library UCRCS09cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX054048 vs. ExPASy Swiss-Prot
Match: FL3H_MALDO (Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 5.391e-18
Identity = 56/210 (26.67%), Postives = 105/210 (50.00%), Query Frame = 1
Query:  112 SNSKEIPSRYIRPELDDEQVLA-DGSLHIPVIDMSKLQDDDD---DELAEFHLACKDSGFLQLINHGVPEKVIEKMKTDIEEFFKLPLEEKMACAQLPNSIEGYGQAFVVSKDQKLDWGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLFEDGIQGIRMNYYPPCAQANRVIGLTPHSD 729
            ++ K +  +++R E +  +V   D S  IP+I ++ + + +    +   +   AC+D G  Q+++HGV  ++I +M     EFF LP EEK+          G+  +  +  +   DW +++   + P   R  S WP  P + R   ++YS EL  +   LL ++++ +G++   L     D  Q + +N+YP C Q +  +GL  H+D
Sbjct:   11 AHEKTLQQKFVRDEDERPKVAYNDFSNEIPIISLAGIDEVEGRRGEICKKIVAACEDWGIFQIVDHGVDAELISEMTGLAREFFALPSEEKLRFDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPIRHRDYSRWPDKPEAWREVTKKYSDELMGLACKLLGVLSEAMGLDTEALTKACVDMDQKVVVNFYPKCPQPDLTLGLKRHTD 220          
BLAST of CX054048 vs. ExPASy Swiss-Prot
Match: IDS2_HORVU (Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=IDS2 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 7.041e-18
Identity = 61/208 (29.33%), Postives = 100/208 (48.08%), Query Frame = 1
Query:  115 NSKEIPSRYIRPELDDEQVLADGSLHIPVIDMSKLQDDDDDELAEFHLACKDSGFLQLINHGVPEKVIEKMKTDIEEFFKLPLEEKMACAQLPNSIEGY---GQAFVVSKDQKLDWGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLFEDGIQGIRMNYYPPCAQANRVIGLTPHSD 729
            ++  IP  ++ P   D    A   + +P+IDMS+ +D+    + +   + K+ GF+Q++NHG+ E ++ +M     EFF +P E+K        S       G AF    ++   W D+L LL  P     T  WP  P  LR  +  Y+   + V + +L+L+ + LG+ P         G   + +NYYPP    +R +GL PH D
Sbjct:   11 HASSIPDSFLLPA--DRLHPATTDVSLPIIDMSRGRDEVRQAILD---SGKEYGFIQVVNHGISEPMLHEMYAVCHEFFDMPAEDKAEFFSEDRSERNKLFCGSAFETLGEKY--WIDVLELL-YPLPSGDTKDWPHKPQMLREVVGNYTSLARGVAMEILRLLCEGLGLRPDFFVGDISGGRVVVDINYYPPSPNPSRTLGLPPHCD 210          
BLAST of CX054048 vs. ExPASy Swiss-Prot
Match: FL3H_ARATH (Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabidopsis thaliana GN=F3H PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 9.196e-18
Identity = 61/212 (28.77%), Postives = 103/212 (48.58%), Query Frame = 1
Query:  106 LASNSKEIPSRYIRPELDDEQVLADG-SLHIPVIDMSKLQDDDDDE---LAEFHLACKDSGFLQLINHGVPEKVIEKMKTDIEEFFKLPLEEKMACAQLPNSIEGYGQAFVVSKDQKLDWGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLFEDGIQGIRMNYYPPCAQANRVIGLTPHSD 729
            LA  SK + S+++R E +  +V  +  S  IPVI ++ + D D        +   AC++ G  Q+++HGV   ++  M     +FF LP E+K+          G+  +  +  +   DW +++   + P   R  S WP  P       EEYS  L  +   LL+++++ +G+E   L +   D  Q I +NYYP C Q +  +GL  H+D
Sbjct:    9 LAGESK-LNSKFVRDEDERPKVAYNVFSDEIPVISLAGIDDVDGKRGEICRQIVEACENWGIFQVVDHGVDTNLVADMTRLARDFFALPPEDKLRFDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPVRNRDYSRWPDKPEGWVKVTEEYSERLMSLACKLLEVLSEAMGLEKESLTNACVDMDQKIVVNYYPKCPQPDLTLGLKRHTD 219          
BLAST of CX054048 vs. ExPASy Swiss-Prot
Match: G3OX2_ARATH (Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA4H PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.676e-17
Identity = 61/210 (29.05%), Postives = 98/210 (46.67%), Query Frame = 1
Query:  121 KEIPSRYIRPELDDEQVLADGSLH-IPVIDMSKLQDDDDDELAEFHLACKDSGFLQLINHGVPEKVIEKMKTDIEEFFKLPLEEKMACAQLPNSIEGYGQAFVVSKDQKLDWGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLA-----SLFEDGIQGIRMNYYPPCAQANRVIGLTPHSDS 732
            K +P  Y     DD    A  S   +P+ID+S     D         AC   G  Q+ NHGVP ++++ ++      F+LP++ K+  A+  N + GYG A + S   K  W +   ++  P +     LWP+        IEEY   +QK+   L+     +LG+E   +      S F+     I++N+YP C + +R +GL  H+DS
Sbjct:   25 KSLPDSYTWTPKDDLLFSASASDETLPLIDLS-----DIHVATLVGHACTTWGAFQITNHGVPSRLLDDIEFLTGSLFRLPVQRKLKAARSENGVSGYGVARIASFFNKKMWSEGFTVIGSPLH-DFRKLWPSHHLKYCEIIEEYEEHMQKLAAKLMWFALGSLGVEEKDIQWAGPNSDFQGTQAVIQLNHYPKCPEPDRAMGLAAHTDS 228          
BLAST of CX054048 vs. ExPASy Swiss-Prot
Match: HY6H_HYONI (Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H6H PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.961e-17
Identity = 59/192 (30.73%), Postives = 96/192 (50.00%), Query Frame = 1
Query:  193 IPVIDMSKLQDDDDDELAEFHLACKDSGFLQLINHGVPEKVIEKMKTDIEEFFKLPLEEK--------MACAQLP--NSIEGYGQAFVVSKDQKLDWGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLFEDGIQGIRM---NYYPPCAQANRVIGLTPHSD 729
            +P+ID   LQ      + +   AC+D G  Q+INHG PE+++ +     +EFF LP EEK         A  +LP     + Y +   +S ++ L W D L     P +    + WP  P   R  + +YS+E++K+T+ +L  + + LG++ G     F++ +  I+M   NYYPPC   +  +G   H D
Sbjct:   35 VPIID---LQQHHHLLVQQITKACQDFGLFQVINHGFPEELMLETMEVCKEFFALPAEEKEKFKPKGEAAKFELPLEQKAKLYVEGEQLSNEEFLYWKDTLAHGCHPLDQDLVNSWPEKPAKYREVVAKYSVEVRKLTMRMLDYICEGLGLKLG----YFDNELSQIQMMLTNYYPPCPDPSSTLGSGGHYD 219          
BLAST of CX054048 vs. ExPASy Swiss-Prot
Match: ACCO1_MALDO (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.961e-17
Identity = 57/209 (27.27%), Postives = 106/209 (50.72%), Query Frame = 1
Query:  196 PVIDMSKLQDDDDDE-LAEFHLACKDSGFLQLINHGVPEKVIEKMKTDIEEFFKLPLEEKMACAQLPNSIEGYGQAFVVSKDQKLDWGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLF---EDGIQGIRMNYYPPCAQANRVIGLTPHSDSVAXXXXXXXXXXXXXXXKKYGKWVPV 810
            PV+D+S +  ++    L + + AC++ GF +L+NHG+  ++++ ++   ++ +K  +E++         +   G   V S+   LDW    FL   P++    S  P +    R T++E+++EL+K+   LL L+ +NLG+E G L  +F   +    G +++ YPPC + + + GL  HSD+                  K G+WV V
Sbjct:    5 PVVDLSLVNGEERAATLEKINDACENWGFFELVNHGMSTELLDTVEKMTKDHYKKTMEQR-----FKEMVAAKGLDDVQSEIHDLDWESTFFLRHLPSS--NISEIPDLEEEYRKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHSDAGGIILLFQDDKVSGLQLLKDGEWVDV 206          
BLAST of CX054048 vs. ExPASy Swiss-Prot
Match: GAOX2_ARATH (Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana GN=20ox2 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.328e-16
Identity = 58/217 (26.73%), Postives = 99/217 (45.62%), Query Frame = 1
Query:  103 ALASNSKEIPSRYIRPELDDEQVLAD-GSLHIPVIDMSKLQDDDDDELAEFHLACKDSGFLQLINHGVPEKVIEKMKTDIEEFFKLPLEEKMACAQLPNSIEGYGQAFVVSKDQKLDWGDMLFLLTQPANIRTTSLWPTIPTSLRATIE-------EYSLELQKVTIFLLKLMAKNLGIEPGKLASLFEDGIQGIRMNYYPPCAQANRVIGLTPHSD 729
            +L +   +IP+++I P  D+E+   D   L++P ID+S  QD   +       AC   GF  ++NHGV E +I      +E FF +PL  K    + P    GY  +F      KL W + L       N  + ++      +L    E       +Y   +  +++ +++L+  +LG+        FE+    +R+N+YPPC   +  +G  PH D
Sbjct:   34 SLLNLQSQIPNQFIWP--DEEKPSIDIPELNVPFIDLSS-QDSTLEAPRVIAEACTKHGFFLVVNHGVSESLIADAHRLMESFFDMPLAGKQKAQRKPGESCGYASSFTGRFSTKLPWKETLSFQFSNDNSGSRTVQDYFSDTLGQEFEQFGKVYQDYCEAMSSLSLKIMELLGLSLGVNRDYFRGFFEENDSIMRLNHYPPCQTPDLTLGTGPHCD 247          
BLAST of CX054048 vs. ExPASy Swiss-Prot
Match: G2OX1_ARATH (Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis thaliana GN=GA2OX1 PE=2 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 3.864e-16
Identity = 61/192 (31.77%), Postives = 101/192 (52.60%), Query Frame = 1
Query:  193 IPVIDMSKLQDDDDDELAEFHLACKDSGFLQLINHGVPEKVIEKMKTDIEEFFKLPLEEKMACAQLPNSIEGYGQAFVVSKDQKLDWGDMLFLLTQPANIRTTSLWPTI---PTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEP-GKLASLFEDGIQG--IRMNYYPPCAQANR-------VIGLTPHSD 729
            IPVIDMS     D +       AC+D GF ++INHGV  +++  ++ +  +FF LP  EK   A  P    GYG +  + ++  + W + L L+    +  +  L+P++   P + R  +EEY+  ++K+T  +L+ +   LGI+P   L+ L  D      +R+N+YPPC  +N+       VIG   H+D
Sbjct:   18 IPVIDMS-----DPESKHALVKACEDFGFFKVINHGVSAELVSVLEHETVDFFSLPKSEKTQVAGYP---FGYGNS-KIGRNGDVGWVEYL-LMNANHDSGSGPLFPSLLKSPGTFRNALEEYTTSVRKMTFDVLEKITDGLGIKPRNTLSKLVSDQNTDSILRLNHYPPCPLSNKKTNGGKNVIGFGEHTD 199          
BLAST of CX054048 vs. ExPASy Swiss-Prot
Match: FL3H_HORVU (Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.864e-16
Identity = 47/157 (29.94%), Postives = 77/157 (49.04%), Query Frame = 1
Query:  259 ACKDSGFLQLINHGVPEKVIEKMKTDIEEFFKLPLEEKMACAQLPNSIEGYGQAFVVSKDQKLDWGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLFEDGIQGIRMNYYPPCAQANRVIGLTPHSD 729
            AC+D G  Q+I+HGV   +I  M     EFF LP E+K+          G+  +  +  +   DW +++   + P   R    WP  P    A +E YS  L  ++  L+ ++++ +G+E   LA    D  Q + +N+YP C Q +  +GL  H+D
Sbjct:   66 ACEDWGIFQVIDHGVDADLIADMTRLAREFFALPAEDKLRYDMSGGKKGGFIVSSHLQGEAVQDWREIVTYFSYPVKARDYGRWPEKPAGWCAVVERYSERLMGLSCNLMGVLSEAMGLETEALAKACVDMDQKVVVNFYPRCPQPDLTLGLKRHTD 222          
BLAST of CX054048 vs. ExPASy Swiss-Prot
Match: ACCO2_MALDO (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Malus domestica GN=ACO2 PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.864e-16
Identity = 55/209 (26.32%), Postives = 104/209 (49.76%), Query Frame = 1
Query:  196 PVIDMSKLQDDDDDE-LAEFHLACKDSGFLQLINHGVPEKVIEKMKTDIEEFFKLPLEEKMACAQLPNSIEGYGQAFVVSKDQKLDWGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLF---EDGIQGIRMNYYPPCAQANRVIGLTPHSDSVAXXXXXXXXXXXXXXXKKYGKWVPV 810
            PV+DM  +  ++    L + + AC++ GF +L+NHG+  ++++ ++   ++ +K  +E++         +   G   V S+   LDW    FL   P++    S  P +    R T++E+++EL+K+   LL L+ +NLG+E G L   F   +    G +++ YPPC + + + GL  H+D+                  K G+W+ V
Sbjct:    5 PVVDMDLINGEERAATLEKINDACENWGFFELVNHGISTELLDTVEKMNKDHYKKTMEQR-----FKEMVAAKGLEAVQSEIHYLDWESTFFLRHLPSS--NISEIPDLEEDYRKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGEWMDV 206          
The following BLAST results are available for this feature:
BLAST of CX054048 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
FL3H_MALDO5.391e-1826.67Naringenin,2-oxoglutarate 3-dioxygenase OS=Malus d... [more]
IDS2_HORVU7.041e-1829.33Mugineic-acid 3-dioxygenase OS=Hordeum vulgare GN=... [more]
FL3H_ARATH9.196e-1828.77Naringenin,2-oxoglutarate 3-dioxygenase OS=Arabido... [more]
G3OX2_ARATH2.676e-1729.05Gibberellin 3-beta-dioxygenase 2 OS=Arabidopsis th... [more]
HY6H_HYONI5.961e-1730.73Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H... [more]
ACCO1_MALDO5.961e-1727.271-aminocyclopropane-1-carboxylate oxidase 1 OS=Mal... [more]
GAOX2_ARATH1.328e-1626.73Gibberellin 20 oxidase 2 OS=Arabidopsis thaliana G... [more]
G2OX1_ARATH3.864e-1631.77Gibberellin 2-beta-dioxygenase 1 OS=Arabidopsis th... [more]
FL3H_HORVU3.864e-1629.94Naringenin,2-oxoglutarate 3-dioxygenase OS=Hordeum... [more]
ACCO2_MALDO3.864e-1626.321-aminocyclopropane-1-carboxylate oxidase 2 OS=Mal... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS09_9H08_g Ruby Orange Developing Seed cDNA Library UCRCS09 Citrus sinensis cDNA clone UCRCS09-9H08-O16-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX054048 ID=CX054048; Name=CX054048; organism=Citrus sinensis; type=EST; length=815bp
AAAAGCTAGGAGAATAATACCCCAAAAGAGAGTTGCGAAATGGAAACTGC
AGTTGACAAGAAAAATGTCTACGGCGGTTCTTTACCTGTAGAAAATGTTC
AAGCTCTTGCATCTAATTCCAAGGAAATCCCATCCCGGTACATCCGACCA
GAACTTGATGATGAGCAAGTTCTCGCTGATGGATCACTTCATATTCCAGT
GATTGATATGAGCAAGCTTCAGGACGATGATGATGATGAATTGGCAGAGT
TCCATTTGGCTTGCAAAGACTCGGGCTTCCTCCAGTTGATCAATCACGGG
GTACCAGAAAAAGTAATTGAGAAGATGAAAACTGACATTGAGGAATTCTT
TAAGCTGCCATTAGAGGAGAAGATGGCTTGCGCACAGCTGCCAAATAGCA
TTGAAGGTTATGGGCAAGCTTTCGTTGTCTCCAAGGATCAAAAGCTTGAT
TGGGGAGACATGCTTTTTCTTCTTACTCAACCTGCCAATATTAGAACCAC
GAGTCTCTGGCCTACCATCCCTACTTCTTTAAGAGCAACCATAGAGGAAT
ACTCTTTGGAACTGCAAAAGGTTACAATCTTTCTGTTGAAGTTGATGGCT
AAGAATTTGGGGATTGAACCTGGGAAACTTGCAAGCTTGTTTGAAGATGG
TATACAAGGAATAAGAATGAATTATTATCCACCATGTGCCCAGGCCAACA
GGGTTATTGGTCTCACTCCACACTCTGACTCTGTTGCATTAACATTGTTG
GTTCAAGTGAACCAAGTACAAGGTTTACAGGTAAAGAAATATGGCAAGTG
GGTACCAGTCAAACC
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