CX054048
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX054048 vs. ExPASy Swiss-Prot
Match: G2OX_PHACN (Gibberellin 2-beta-dioxygenase OS=Phaseolus coccineus GN=GA2OX1 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.998e-13 Identity = 57/188 (30.32%), Postives = 92/188 (48.94%), Query Frame = 1 Query: 193 IPVIDMSKLQDDDDDELAEFHLACKDSGFLQLINHGVPEKVIEKMKTDIEEFFKLPLEEKMACAQLPNSIEGYGQAFVVSKDQKLDWGDMLFLLTQPANIRTTSL--WPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGI-EPGKLASLFED--GIQGIRMNYYPPCAQA----NRVIGLTPHSD 729 IPV+D++ D + + AC+D GF +L+NHGVP +++ ++ + FFK EK P GYG + + + W + L L T P I SL + P RA +E Y ++ + +L+LMA+ LGI + L+ L +D R+N+YPPC + ++G H+D Sbjct: 27 IPVVDLT--HPDAKNLIVN---ACRDFGFFKLVNHGVPLELMANLENEALRFFKKSQSEKDRAG--PPDPFGYGSK-RIGPNGDVGWVEYLLLNTNPDVISPKSLCIFRENPHHFRAVVENYITAVKNMCYAVLELMAEGLGIRQRNTLSRLLKDEKSDSCFRLNHYPPCPEVQALNRNLVGFGEHTD 206
BLAST of CX054048 vs. ExPASy Swiss-Prot
Match: G2OX8_ARATH (Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 3.998e-13 Identity = 53/191 (27.75%), Postives = 99/191 (51.83%), Query Frame = 1 Query: 187 LHIPVIDMSKLQDDDDDELAE----FHLACKDSGFLQLINHGVPEKVIEKMKTDIEEFFKLPLEEKMACAQLPNSIEGYGQAFVVSKDQKLDWGDMLFL-LTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLFEDGIQG----IRMNYYPPCAQANRVIGLTPHSDS 732 + +PVID+S+L D ++E + A ++ GF Q+INHG+ V+EKM+ + F+ P ++K + +G S Q L W + + +T ++ + T+L +T+E+++ E + + L +++A+ + G+ +S F++ +RMN YPPC + + V GL PH+DS Sbjct: 40 VELPVIDVSRLIDGAEEEREKCKEAIARASREWGFFQVINHGISMDVLEKMRQEQIRVFREPFDKKSKSEKFSAGSYRWGTPSATSIRQ-LSWSEAFHVPMTDISDNKDF-------TTLSSTMEKFASESEALAYMLAEVLAE----KSGQNSSFFKENCVRNTCYLRMNRYPPCPKPSEVYGLMPHTDS 218
BLAST of CX054048 vs. ExPASy Swiss-Prot
Match: GAOX1_ORYSJ (Gibberellin 20 oxidase 1 OS=Oryza sativa subsp. japonica GN=20ox1 PE=2 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 1.163e-12 Identity = 54/222 (24.32%), Postives = 94/222 (42.34%), Query Frame = 1 Query: 103 ALASNSKEIPSRYIRPELDDEQVLADGSLHIPVIDMSKLQDDDDDELAEFHLACKDSGFLQLINHGVPEKVIEKMKTDIEEFFKLPLEEKMACAQLPNSIEGYGQAFVVSKDQKLDWGDMLFLLTQPA----------NIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGK---LASLFEDGIQGIRMNYYPPCAQANRVIGLTPHSD 729 A+ S EIPS++I P + +A L + +ID+ + + + AC+ GF ++NHG+ ++E+ ++ FF LPL EK + GY +F KL W + L A L L Y E+ ++++ L++++ ++LGI + F+ +R+NYYP C + +G PH D Sbjct: 16 AVLSGQTEIPSQFIWPAEESPGSVAVEELEVALIDVGA-GAERSSVVRQVGEACERHGFFLVVNHGIEAALLEEAHRCMDAFFTLPLGEKQRAQRRAGESCGYASSFTGRFASKLPWKETLSFRYSSAGDEEGEEGVGEYLVRKLGAEHGRRLGEVYSRYCHEMSRLSLELMEVLGESLGIVGDRRHYFRRFFQRNDSIMRLNYYPACQRPLDTLGTGPHCD 236
BLAST of CX054048 vs. ExPASy Swiss-Prot
Match: G2OX2_ARATH (Gibberellin 2-beta-dioxygenase 2 OS=Arabidopsis thaliana GN=GA2OX2 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.592e-12 Identity = 55/214 (25.70%), Postives = 100/214 (46.73%), Query Frame = 1 Query: 193 IPVIDMSKLQDDDDDELAEFHLACKDSGFLQLINHGVPEKVIEKMKTDIEEFFKLPLEEKMACAQLPNSIEGYGQAFVVSKDQKLDWGDMLFLLTQP--ANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLF---EDGIQGIRMNYYPPC---AQANRVIGLTPHSDSVAXXXXXXXXXXXXXXXKKYGKWVPV 810 IPV++++ D + AC++ GF +++NHGV +++ +++ + FF LP K P GYG + + + W + L L P ++ +T++++ P R ++EEY E+++V+ +L+++A+ LGIEP S E +R+N+YP A+ +G H+D K G WV V Sbjct: 31 IPVVNLA-----DPEAKTRIVKACEEFGFFKVVNHGVRPELMTRLEQEAIGFFGLPQSLKNRAG--PPEPYGYGNKRI-GPNGDVGWIEYLLLNANPQLSSPKTSAVFRQTPQIFRESVEEYMKEIKEVSYKVLEMVAEELGIEPRDTLSKMLRDEKSDSCLRLNHYPAAEEEAEKMVKVGFGEHTDPQIISVLRSNNTAGLQICVKDGSWVAV 236
BLAST of CX054048 vs. ExPASy Swiss-Prot
Match: G2OX1_PEA (Gibberellin 2-beta-dioxygenase 1 OS=Pisum sativum GN=GA2OX1 PE=1 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.385e-12 Identity = 57/216 (26.39%), Postives = 94/216 (43.52%), Query Frame = 1 Query: 184 SLHIPVIDMSKLQDDDDDELAEFHLACKDSGFLQLINHGVPEKVIEKMKTDIEEFFKLPLEEKMACAQLPNSIEGYGQAFVVSKDQKLDWGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLFEDGIQG---IRMNYYPPCAQ----ANRVIGLTPHSDSVAXXXXXXXXXXXXXXXKKYGKWVPV 810 S IP++D+SK D AC+D GF ++INHG+P I +++++ +FF LP EK P + GYG + + + W + L L T + SL+ R +++Y ++ + +L LMA+ L I+P + S Q R+N+YP C + +IG H+D + G W+ V Sbjct: 24 SSSIPLVDLSK-----PDAKTLIVKACEDFGFFKVINHGIPLDAISQLESEAFKFFSLPQTEKEKAG--PANPFGYGNK-RIGLNGDIGWIEYLLLTTNQDH--NFSLYGEDIDKFRGLLKDYKCAMRNMACEILDLMAEGLKIQPKNVFSKLVMDKQSDCLFRVNHYPACPELAINGENLIGFGEHTDPQIISILRSNNTSGFQISLRDGSWISV 229
BLAST of CX054048 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.540e-12 Identity = 60/219 (27.40%), Postives = 98/219 (44.75%), Query Frame = 1 Query: 112 SNSKEIPSRYIRP--ELDDEQVLADGSLH---IPVIDMSKLQDDD----DDELAEFHLACKDSGFLQLINHGVPEKVIEKMKTDIEEFFKLPLEEKMACAQLPNSIEG-YGQAFVVSKDQKLDWGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLFEDGIQGIRM--NYYPPCAQANRVIGLTPHSDS 732 S ++P + P +L + L LH IP ID+ D ++ + E A GF Q+INHGV +++EKMK + +F + E + S Y F + +W D P + L P R + EYS ++ + FL +L+++ LG+EP L + D +G+ M +YYPPC + + +G + HSD+ Sbjct: 32 SGVSQVPRIFHHPTVKLSTPKPLPSDLLHLKTIPTIDLGGRDFQDAIKRNNAIEEIKEAAAKWGFFQVINHGVSLELLEKMKKGVRDFHEQSQEVRKEFYSRDFSRRFLYLSNFDLFSSPAANWRDTFSCTMAPDTPKPQDL----PEICRDIMMEYSKQVMNLGKFLFELLSEALGLEPNHLNDM--DCSKGLLMLSHYYPPCPEPDLTLGTSQHSDN 244
BLAST of CX054048 vs. ExPASy Swiss-Prot
Match: ACCO_DENCR (1-aminocyclopropane-1-carboxylate oxidase OS=Dendrobium crumenatum GN=ACO PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.680e-11 Identity = 51/177 (28.81%), Postives = 86/177 (48.59%), Query Frame = 1 Query: 235 DELAEFHLACKDSGFLQLINHGVPEKVIEKMKTDIEEFFKLPLEE------KMACAQLPNSIEGYGQAFVVSKDQKLDWGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLF---EDGIQ--GIRMNYYPPCAQANRVIGLTPHSDS 732 D +A AC++ GF +L+NHG+ + E+ +T +E ++ K A+ +S E LDW FL P + S P + +T++E++L L+K+ LL L+ +NLG+E G L +F DG+ G +++ YPPC + + GL H+D+ Sbjct: 11 DAMAVLRDACENWGFFELLNHGISHEPNEQSETVNKEHYREHYRRFREQRFKEFAAKTLDSGENV-------DGDNLDWESTFFLRHLPTS--NISQVPDLDEDCGSTMKEFALGLEKLAERLLDLLCENLGLEKGYLKRVFCGGSDGLPTFGTKVSNYPPCPKPELIKGLRAHTDA 178
BLAST of CX054048 vs. ExPASy Swiss-Prot
Match: G2OX7_ARATH (Gibberellin 2-beta-dioxygenase 7 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.194e-11 Identity = 50/215 (23.26%), Postives = 95/215 (44.19%), Query Frame = 1 Query: 187 LHIPVIDMSKLQDDDDDE----LAEFHLACKDSGFLQLINHGVPEKVIEKMKTDIEEFFKLPLEEKMA--CAQLPNSIEGYGQAFVVSKDQKLDWGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLFEDGIQGIRMNYYPPCAQANRVIGLTPHSDSVAXXXXXXXXXXXXXXXKKYGKWVPVK 813 + +PVID+S L ++ + + + A K+ GF Q++NHG+P+ V E M + ++ F P K+ + L + +G S Q +L++ + I +LR +E Y E+ +V + +++ K + + ++FE +R+N Y P + V GL PH+D+ + + G+W+ VK Sbjct: 38 IKLPVIDLSHLTSGEEVKRKRCVKQMVAAAKEWGFFQIVNHGIPKDVFEMMLLEEKKLFDQPFSVKVRERFSDLSKNSYRWGNPSATSPAQYSVSEAFHIILSEVSRISDDR------NNLRTIVETYVQEIARVAQMICEILGKQVNVSSEYFENIFELENSFLRLNKYHPSVFGSEVFGLVPHTDT-SFLTILSQDQIGGLELENNGQWISVK 245
BLAST of CX054048 vs. ExPASy Swiss-Prot
Match: ACCH2_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.865e-11 Identity = 56/208 (26.92%), Postives = 94/208 (45.19%), Query Frame = 1 Query: 151 ELDDEQVLADGSLH---IPVIDMSKLQDDD----DDELAEFHLACKDSGFLQLINHGVPEKVIEKMKTDIEEFFKLPLEEKMACAQLPNSIEGYGQAFVVSKDQKL------DWGDMLFLLTQPANIRTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEPGKLASLFEDGIQGIRM--NYYPPCAQANRVIGLTPHSD 729 EL + + L LH IP ID+ D + + A GF Q+INHGV +++EKMK + +F + P E + +G+ F+ + L +W D + P L P R + EYS ++ + FL +L+++ LG+ P L + + ++G+RM +Y+PPC + + G + HSD Sbjct: 47 ELANPKPLPSDLLHLKTIPTIDLGGRDFQDAIKHKNAIEGIKEAAAKWGFFQVINHGVSLELLEKMKDGVRDFHEQPPEVRKDLYS-----RDFGRKFIYLSNFDLYTAAAANWRDTFYCYMAPDPPEPQDL----PEICRDVMMEYSKQVMILGEFLFELLSEALGLNPNHLKDM--ECLKGLRMLCHYFPPCPEPDLTFGTSKHSD 243
BLAST of CX054048 vs. ExPASy Swiss-Prot
Match: G2OX3_ARATH (Gibberellin 2-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=GA2OX3 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.888e-11 Identity = 64/236 (27.12%), Postives = 107/236 (45.34%), Query Frame = 1 Query: 139 YIRPELDDEQVLADGSLHIPVIDMSKLQDDDDDELAEFHLACKDSGFLQLINHGVPEKVIEKMKTDIEEFFKL--PLEEKMACAQLPNSIEGYGQAFVVSKDQKLDWGDMLFLLTQPANI-----RTTSLWPTIPTSLRATIEEYSLELQKVTIFLLKLMAKNLGIEP-GKLASL--FEDGIQGIRMNYYPPCAQ--ANRVIGLTPHSDSVAXXXXXXXXXXXXXXXKKYGKWVPV 810 Y+ P+ VL IPVID++ D D + AC++ GF ++INHGV ++ +++ + FF L L++K P GYG + + L W + + L AN+ +TT+++ P R +EEY E+++++ L+++ + L IEP KL+ L ++ +RMN+YP + IG H+D K G WV V Sbjct: 15 YVNPKCKPRPVL------IPVIDLT-----DSDAKTQIVKACEEFGFFKVINHGVRPDLLTQLEQEAINFFALHHSLKDKAG----PPDPFGYGTK-RIGPNGDLGWLEYILL---NANLCLESHKTTAIFRHTPAIFREAVEEYIKEMKRMSSKFLEMVEEELKIEPKEKLSRLVKVKESDSCLRMNHYPEKEETPVKEEIGFGEHTDPQLISLLRSNDTEGLQICVKDGTWVDV 231 The following BLAST results are available for this feature:
BLAST of CX054048 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >CX054048 ID=CX054048; Name=CX054048; organism=Citrus sinensis; type=EST; length=815bpback to top |