DR403737

Overview
NameDR403737
Unique NameDR403737
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length700
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DR403737 vs. ExPASy Swiss-Prot
Match: SYA_HALSA (Alanyl-tRNA synthetase OS=Halobacterium salinarium GN=alaS PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.467e-11
Identity = 61/217 (28.11%), Postives = 101/217 (46.54%), Query Frame = 1 
Query:   58 TKLDYYDNTLKLQSTSKLISFFK--GDDGRRA--LILESTIFHPQGGGQPSDTGFIIVADSDFKFIVQDVRSRDGIVFHYGVFENSGGEFETELEKGKEVRLWVDESRRKLNSRLHSAGHLLDVCMQKVGLGHLEPGKGYHFPDGPYVEYKGSVPQNELQSKTKELELEANALISRGGKVMVAVLPYEEASMLCGGCL-PHYIPQGSTPRIVKLGDN 693
            T+  YYD+    +  + ++  F+  G+DG  A  ++L+ T+F+P+GGGQP+DTG  ++   D    V DV+ RDG+V H    +N G        KG+ VR  +D  RR+     H+A H++    ++V   H+         D   ++   +  +   +   KE+E  AN ++     V        EA    G  L    IP G   R+V + D+
Sbjct:  515 TETLYYDDAYGSEFEAVVLDVFEREGEDGDGAFDVVLDQTMFYPEGGGQPADTG--VLTGDDHTVDVIDVQERDGVVLH-RTTDNPG--------KGEFVRGQIDTERRRRLMAHHTATHIVVYAARQVLGEHVRQAGAQKGVDSSRIDV--THYERVDRETVKEIERVANEIVRANTSVQCEWPDRHEAEAEYGFDLYQGGIPAGEQIRLVHVDDD 718
[Close]
BLAST of DR403737 vs. ExPASy Swiss-Prot
Match: SYA_HALS3 (Alanyl-tRNA synthetase OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=alaS PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.467e-11
Identity = 61/217 (28.11%), Postives = 101/217 (46.54%), Query Frame = 1 
Query:   58 TKLDYYDNTLKLQSTSKLISFFK--GDDGRRA--LILESTIFHPQGGGQPSDTGFIIVADSDFKFIVQDVRSRDGIVFHYGVFENSGGEFETELEKGKEVRLWVDESRRKLNSRLHSAGHLLDVCMQKVGLGHLEPGKGYHFPDGPYVEYKGSVPQNELQSKTKELELEANALISRGGKVMVAVLPYEEASMLCGGCL-PHYIPQGSTPRIVKLGDN 693
            T+  YYD+    +  + ++  F+  G+DG  A  ++L+ T+F+P+GGGQP+DTG  ++   D    V DV+ RDG+V H    +N G        KG+ VR  +D  RR+     H+A H++    ++V   H+         D   ++   +  +   +   KE+E  AN ++     V        EA    G  L    IP G   R+V + D+
Sbjct:  515 TETLYYDDAYGSEFEAVVLDVFEREGEDGDGAFDVVLDQTMFYPEGGGQPADTG--VLTGDDHTVDVIDVQERDGVVLH-RTTDNPG--------KGEFVRGQIDTERRRRLMAHHTATHIVVYAARQVLGEHVRQAGAQKGVDSSRIDV--THYERVDRETVKEIERVANEIVRANTSVQCEWPDRHEAEAEYGFDLYQGGIPAGEQIRLVHVDDD 718
The following BLAST results are available for this feature:
BLAST of DR403737 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 12
Match NameE-valueIdentityDescription
SYA_HALSA6.467e-1128.11Alanyl-tRNA synthetase OS=Halobacterium salinarium... [more]
SYA_HALS36.467e-1128.11Alanyl-tRNA synthetase OS=Halobacterium salinarum ... [more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246B22 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246B22 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403737 ID=DR403737; Name=DR403737; organism=Citrus sinensis; type=EST; length=700bp
CGGCCGGGGGGAGAAAAAGTCCTGCAGNNNGAAGNNNNGAACACGGAAGT
GATTCCGACAAAGCTAGATTACTACGACAACACGTTAAAGCTCCAATCGA
CTTCCAAACTCATTTCGTTTTTCAAGGGTGATGACGGTAGACGAGCATTG
ATACTAGAGTCTACGATATTTCATCCGCAAGGCGGCGGTCAACCCTCCGA
CACTGGCTTTATCATCGTTGCTGATTCTGATTTCAAGTTCATTGTACAAG
ACGTTCGATCAAGAGATGGGATTGTGTTTCATTATGGGGTTTTTGAGAAT
TCTGGCGGGGAATTTGAAACGGAGTTAGAGAAAGGGAAAGAAGTTCGTTT
ATGGGTAGATGAGTCGAGGCGAAAGCTGAATTCAAGGCTGCACTCAGCTG
GGCATTTGCTGGATGTATGCATGCAAAAGGTTGGATTAGGACATTTAGAG
CCAGGCAAAGGCTACCATTTCCCTGATGGGCCCTATGTTGAGTATAAAGG
CTCTGTTCCACAAAATGAATTACAAAGCAAGACAAAAGAACTAGAGCTTG
AAGCTAATGCATTAATCTCTAGAGGAGGGAAAGTTATGGTTGCTGTATTA
CCATATGAAGAAGCTTCTATGCTTTGTGGTGGCTGCCTTCCCCATTATAT
TCCGCAGGGCAGCACTCCTCGAATTGTGAAATTAGGAGATAATCCTGGTT
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