DR403709

Overview
NameDR403709
Unique NameDR403709
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length704
Libraries
Library NameType
Developing fruit peel at 38 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403709 vs. ExPASy Swiss-Prot
Match: CHI4_SOLTU (Endochitinase 4 (Fragment) OS=Solanum tuberosum GN=CHTB4 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.334e-23
Identity = 56/149 (37.58%), Postives = 79/149 (53.02%), Query Frame = 1
Query:  259 FENFFSKRNTPVAHAVG-FWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAA 702
            F+     RN         F+ Y +FI A   +   GFGTTG    + +EI AF A    +T+ G+  A  GP AWG C+  E      YC  S ++  PC PG +Y+GRG I I  NYNYG  G A+  DLLN+P+ +  +  ++F++A
Sbjct:   87 FDQMLKHRNDNACQGKNNFYSYNAFINAARSFG--GFGTTGDTTARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSGQW--PCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSA 231          
BLAST of DR403709 vs. ExPASy Swiss-Prot
Match: CHI1_ORYSJ (Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht1 PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 7.427e-23
Identity = 53/150 (35.33%), Postives = 84/150 (56.00%), Query Frame = 1
Query:  259 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPS--QSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAA 702
            F+     RN     A  F+ Y +F+ A   +    F TTG    + +E+ AFLA    +T+ G+  A  GP +WG C+  E + +    YC  S ++  PC  G +YYGRG I I +NYNYG  G+A+ ++LL++P+ +  +AT++F+ A
Sbjct:   88 FDQMLLHRNDAACPAKNFYTYDAFVAAANAFP--SFATTGDAATRKREVAAFLAQTSHETTGGWATAPDGPYSWGYCFKEENNGNVGSDYCVQSSQW--PCAAGKKYYGRGPIQISYNYNYGPAGQAIGSNLLSNPDLVASDATVSFKTA 233          
BLAST of DR403709 vs. ExPASy Swiss-Prot
Match: CHI12_ORYSJ (Chitinase 12 OS=Oryza sativa subsp. japonica GN=Cht12 PE=2 SV=2)

HSP 1 Score: 105.531 bits (262), Expect = 2.822e-22
Identity = 55/151 (36.42%), Postives = 80/151 (52.98%), Query Frame = 1
Query:  259 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMK-EICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEM--SPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAA 702
            F+     RN     A  F+ Y +F+ A   +   GF   G   D  K E+ AFLA    +T+ G+  A  GP AWG C+  E   +    YC  S ++  PC  G +YYGRG I + +N+NYG  G+A+ ADLL  P+ +  +AT++F+ A
Sbjct:   90 FDQMLLHRNDAACPASNFYTYDAFVAAASAFP--GFAAAGGDADTNKREVAAFLAQTSHETTGGWATAPDGPYAWGYCFKEENGGAAGPDYCQQSAQW--PCAAGKKYYGRGPIQLSYNFNYGPAGQAIGADLLGDPDLVASDATVSFDTA 236          
BLAST of DR403709 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSJ (Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht7 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.686e-22
Identity = 55/149 (36.91%), Postives = 79/149 (53.02%), Query Frame = 1
Query:  256 QFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAA 702
            QFE     R+     A GF+ Y++F+ A   +    F  TG    + +E+ AFLA     TS       GGP +WG CY      +  +C  + ++  PC PG  Y+ RG + I +NYNYGA GEA+ ADLL +PE +  + T+AF+ A
Sbjct:  105 QFERMLPHRDDAACPARGFYAYRAFVAAAGAFP--AFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCYKEVKGATSDFCVPNARW--PCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTA 242          
BLAST of DR403709 vs. ExPASy Swiss-Prot
Match: CHI7_ORYSI (Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.686e-22
Identity = 55/149 (36.91%), Postives = 79/149 (53.02%), Query Frame = 1
Query:  256 QFENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAA 702
            QFE     R+     A GF+ Y++F+ A   +    F  TG    + +E+ AFLA     TS       GGP +WG CY      +  +C  + ++  PC PG  Y+ RG + I +NYNYGA GEA+ ADLL +PE +  + T+AF+ A
Sbjct:  105 QFERMLPHRDDAACPARGFYAYRAFVAAAGAFP--AFAATGDADTRKREVAAFLAQTSHATS-------GGPYSWGYCYKEVKGATSDFCVPNARW--PCAPGKAYHARGPMQIAYNYNYGAAGEAIGADLLGNPELVATDPTVAFKTA 242          
BLAST of DR403709 vs. ExPASy Swiss-Prot
Match: AGI_URTDI (Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE=1 SV=3)

HSP 1 Score: 89.3521 bits (220), Expect = 2.093e-17
Identity = 50/149 (33.56%), Postives = 81/149 (54.36%), Query Frame = 1
Query:  259 FENFFSKRNTPVAHAVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQS-YCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAA 702
            F+  FS R      + GF+ Y SF+ A   +    FGT G    + +E+ AFLAH+   TS G       P AWGLC+ +  + +++ +C  S    +PC  G +Y  RG I +  N+NYG  G+A+  DL+ +P+ +E++  ++F+ A
Sbjct:  139 FDQMFSHRKD--CPSQGFYSYHSFLVAAESFP--AFGTIGDVATRKREVAAFLAHISQATS-GERSDVENPHAWGLCHINTTTVTENDFCTSS---DWPCAAGKKYSPRGPIQLTHNFNYGLAGQAIGEDLIQNPDLVEKDPIISFKTA 279          
BLAST of DR403709 vs. ExPASy Swiss-Prot
Match: CHI5_ORYSJ (Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht5 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.089e-17
Identity = 50/132 (37.88%), Postives = 70/132 (53.03%), Query Frame = 1
Query:  310 FWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMS-PSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAA 702
            F+  QSF+ A   Y   GF    T  D  +EI AF AHV  +T               +CY +E++  S  YCD + K  +PC PG +YYGRG + I WNYNYG  G+ +  D L  P+ + Q+ T++F+ A
Sbjct:  112 FYTRQSFLNAAHSYS--GFARDRTNDDSKREIAAFFAHVTHETG-------------HMCYINEINGASMDYCDKNNKQ-WPCQPGKKYYGRGPLQISWNYNYGPAGQNIGFDGLRDPDRVAQDPTISFKTA 227          
BLAST of DR403709 vs. ExPASy Swiss-Prot
Match: CHI4_ORYSJ (Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht4 PE=2 SV=2)

HSP 1 Score: 86.2705 bits (212), Expect = 1.772e-16
Identity = 49/132 (37.12%), Postives = 70/132 (53.03%), Query Frame = 1
Query:  310 FWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMS-PSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAA 702
            F+  QSF+ A   Y   GF    T  D  +EI AF AHV  +T               +CY +E++  +  YCD S K  +PC PG +YYGRG + I WN+NYG  G+ +  D L  P+ + Q+ T++F+ A
Sbjct:  109 FYTRQSFLNAARSYS--GFANDRTNDDSKREIAAFFAHVTHETG-------------HMCYINEINGANMDYCDKSNKQ-WPCQPGKKYYGRGPLQISWNFNYGPAGKNIGFDGLRDPDKVAQDPTISFKTA 224          
BLAST of DR403709 vs. ExPASy Swiss-Prot
Match: CHI6_ORYSJ (Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht6 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.314e-16
Identity = 49/135 (36.30%), Postives = 71/135 (52.59%), Query Frame = 1
Query:  301 AVGFWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMS-PSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAA 702
            A GF+   +F+TA   Y    FG TG+  D  +EI AF AH   +T                CY  E+  PS++YCD++    +PC  G  YYGRG + I WN+NYG  G+++  D L  P+ + ++  LAF+ A
Sbjct:   90 AKGFYTRDAFLTAAGGYP--SFGRTGSVDDSKREIAAFFAHANHETI-------------KFCYIEEIDGPSKNYCDET-STQWPCMAGKGYYGRGPLQISWNFNYGPAGQSIGFDGLGDPDAVARSPVLAFQTA 208          
BLAST of DR403709 vs. ExPASy Swiss-Prot
Match: CHIB_MAIZE (Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.733e-16
Identity = 47/131 (35.88%), Postives = 69/131 (52.67%), Query Frame = 1
Query:  310 FWDYQSFITATVKYQPLGFGTTGTKLDKMKEICAFLAHVGCKTSCGYGVATGGPLAWGLCYNHEMSPSQSYCDDSYKYTYPCTPGAEYYGRGAIPIYWNYNYGATGEALKADLLNHPEYIEQNATLAFEAA 702
            F+   +F++A   Y   GF   G+++   +EI AF AH   +T                CY  E++ S +YCD + K  +PC  G +YYGRG + I WNYNYG  G A+  D L  P  + ++A +AF+AA
Sbjct:   94 FYTRSAFLSAVKGYP--GFAHGGSQVQGKREIAAFFAHATHETG-------------HFCYISEINKSNAYCDPT-KRQWPCAAGQKYYGRGPLQISWNYNYGPAGRAIGFDGLGDPGRVARDAVVAFKAA 208          
The following BLAST results are available for this feature:
BLAST of DR403709 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 50
Match NameE-valueIdentityDescription
CHI4_SOLTU3.334e-2337.58Endochitinase 4 (Fragment) OS=Solanum tuberosum GN... [more]
CHI1_ORYSJ7.427e-2335.33Chitinase 1 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI12_ORYSJ2.822e-2236.42Chitinase 12 OS=Oryza sativa subsp. japonica GN=Ch... [more]
CHI7_ORYSJ3.686e-2236.91Chitinase 7 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI7_ORYSI3.686e-2236.91Chitinase 7 OS=Oryza sativa subsp. indica GN=Cht7 ... [more]
AGI_URTDI2.093e-1733.56Lectin/endochitinase 1 OS=Urtica dioica GN=UDA1 PE... [more]
CHI5_ORYSJ6.089e-1737.88Chitinase 5 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI4_ORYSJ1.772e-1637.12Chitinase 4 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHI6_ORYSJ2.314e-1636.30Chitinase 6 OS=Oryza sativa subsp. japonica GN=Cht... [more]
CHIB_MAIZE6.733e-1635.88Endochitinase B (Fragment) OS=Zea mays PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCSAH-PNP1246A15 Developing fruit peel at 38 DAFB Citrus sinensis cDNA clone CSAH-PNP1246A15 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403709 ID=DR403709; Name=DR403709; organism=Citrus sinensis; type=EST; length=704bp
GGGGAAGTGAATCTCGAAACAACAGGTAGATCTGGTGAGAACGAGAAAAT
GAAGATGAAGAATGGCAGTGTGGCAATGACACTGACAGTGGCACTAGTAC
TGGCACTGGCAGTGAGTTTGGCAAATGGAGATGAATCAGAGAAGGTGATA
GTGAAGAAGTTGAAGGGGAAAAAAGTTTGCATAAAAGGGTGGGAGTGCCC
AACATGGTCGAAATTCTGCTGTAACGAGACGATATCAGACTATTTCCAGG
TTTACCAGTTTGAGAATTTCTTCTCGAAAAGGAACACGCCGGTGGCACAT
GCCGTGGGATTCTGGGATTATCAGTCTTTCATTACTGCCACCGTCAAATA
TCAGCCCCTCGGCTTCGGTACCACCGGTACTAAGCTTGATAAGATGAAGG
AGATTTGCGCTTTTCTTGCCCACGTGGGCTGCAAGACCTCTTGTGGATAT
GGAGTGGCCACTGGAGGACCATTGGCCTGGGGACTTTGCTACAACCATGA
AATGAGCCCCAGTCAGTCATATTGTGATGATTCCTACAAATACACATATC
CCTGCACCCCTGGAGCTGAGTACTATGGCCGAGGTGCTATACCTATATAC
TGGAACTATAACTATGGAGCCACTGGGGAAGCATTGAAGGCAGATCTGTT
GAATCATCCCGAATACATTGAGCAGAATGCTACCCTTGCCTTTGAGGCTG
CAAT
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