CX053630
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX053630 vs. ExPASy Swiss-Prot
Match: RL17_RAT (60S ribosomal protein L17 OS=Rattus norvegicus GN=Rpl17 PE=2 SV=3) HSP 1 Score: 212.616 bits (540), Expect = 1.889e-54 Identity = 104/149 (69.80%), Postives = 123/149 (82.55%), Query Frame = -3 Query: 316 YSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 762 YS +P+NPTKSCK+RGS+LRVHFKNTRETA AI+ + + KA +YL+DV KQ +PF R+ GGVGR AQAK QGRWP KSA+F+L +LKNAESNAE+KGLDVD+L I HIQVN+A K RRRTYRAHGRINPYMSSPCHIE+ L+ Sbjct: 4 YSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPFRRYNGGVGRCAQAKQWGWT-QGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILT 151
BLAST of CX053630 vs. ExPASy Swiss-Prot
Match: RL17_MOUSE (60S ribosomal protein L17 OS=Mus musculus GN=Rpl17 PE=2 SV=3) HSP 1 Score: 212.616 bits (540), Expect = 1.889e-54 Identity = 104/149 (69.80%), Postives = 123/149 (82.55%), Query Frame = -3 Query: 316 YSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 762 YS +P+NPTKSCK+RGS+LRVHFKNTRETA AI+ + + KA +YL+DV KQ +PF R+ GGVGR AQAK QGRWP KSA+F+L +LKNAESNAE+KGLDVD+L I HIQVN+A K RRRTYRAHGRINPYMSSPCHIE+ L+ Sbjct: 4 YSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPFRRYNGGVGRCAQAKQWGWT-QGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILT 151
BLAST of CX053630 vs. ExPASy Swiss-Prot
Match: RL17_BOVIN (60S ribosomal protein L17 OS=Bos taurus GN=RPL17 PE=2 SV=3) HSP 1 Score: 212.616 bits (540), Expect = 1.889e-54 Identity = 104/149 (69.80%), Postives = 123/149 (82.55%), Query Frame = -3 Query: 316 YSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 762 YS +P+NPTKSCK+RGS+LRVHFKNTRETA AI+ + + KA +YL+DV KQ +PF R+ GGVGR AQAK QGRWP KSA+F+L +LKNAESNAE+KGLDVD+L I HIQVN+A K RRRTYRAHGRINPYMSSPCHIE+ L+ Sbjct: 4 YSLDPENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLKKQCVPFRRYNGGVGRCAQAKQWGWT-QGRWPKKSAEFLLHMLKNAESNAELKGLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILT 151
BLAST of CX053630 vs. ExPASy Swiss-Prot
Match: RL17_LONON (60S ribosomal protein L17 OS=Lonomia obliqua GN=RpL17 PE=2 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 2.467e-54 Identity = 110/169 (65.09%), Postives = 126/169 (74.56%), Query Frame = -3 Query: 256 YSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLSXXXXXXXXXXETQLATSKSK 762 YS++P+NP KSCKARGS+LRVHFKNT ETA AIRK+PL +A RYL++V K+ IPF RF GGVGR AQAK + QGRWP KSA+F L LL+NAESNA+ KGLDVD L I HIQVN+A RRRTYRAHGRINPYMSSPCHIE+ LS T A +K K Sbjct: 4 YSRDPENPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVTEKKECIPFRRFNGGVGRCAQAK-QFGTTQGRWPKKSAEFPLQLLRNAESNADYKGLDVDRLVIDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIEVALSEREDAVSRAAPTDDAPAKKK 171
BLAST of CX053630 vs. ExPASy Swiss-Prot
Match: RL17_ARGMO (60S ribosomal protein L17 OS=Argas monolakensis GN=RpL17 PE=2 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 2.467e-54 Identity = 105/149 (70.47%), Postives = 123/149 (82.55%), Query Frame = -3 Query: 316 YSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 762 YS EPDN TKSCKARGS+LRVHFKNTRETA AI+++ L +A+RYL++V+A K+ +PF RF GGVGR AQAK QGRWP KSA+F+ LL+NAESNA+ KGLDVD L I HIQVN+A K RRRTYRAHGRINPYMSSPCH+E+ LS Sbjct: 4 YSVEPDNATKSCKARGSNLRVHFKNTRETAQAIKRMSLRRAQRYLKNVIAKKEIVPFRRFNGGVGRKAQAKAWGCT-QGRWPKKSAEFLWQLLRNAESNADYKGLDVDRLVIDHIQVNRAPKMRRRTYRAHGRINPYMSSPCHVEVILS 151
BLAST of CX053630 vs. ExPASy Swiss-Prot
Match: RL17_IXOSC (60S ribosomal protein L17 OS=Ixodes scapularis GN=RpL17 PE=2 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 3.222e-54 Identity = 106/149 (71.14%), Postives = 122/149 (81.88%), Query Frame = -3 Query: 316 YSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 762 YS EPDN TKSCKARGS+LRVHFKNTRETA AI+ + L +A+RYL++V+A K+ +PF RF GGVGR AQAK QGRWP KSA+F+ LL+NAESNA+ KGLDVD L I HIQVN+A K RRRTYRAHGRINPYMSSPCHIE+ LS Sbjct: 4 YSVEPDNATKSCKARGSNLRVHFKNTRETAQAIKHMALRRAQRYLKNVIAKKEIVPFRRFNGGVGRKAQAK-AFGCTQGRWPKKSAEFLWQLLRNAESNADYKGLDVDRLVIDHIQVNRAPKMRRRTYRAHGRINPYMSSPCHIEVILS 151
BLAST of CX053630 vs. ExPASy Swiss-Prot
Match: RL17_AEDAL (60S ribosomal protein L17 OS=Aedes albopictus GN=RpL17 PE=2 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 7.177e-54 Identity = 101/149 (67.79%), Postives = 126/149 (84.56%), Query Frame = -3 Query: 316 YSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 762 Y+KEPDNP KSCKARGS+LRVHFKNTRETA AI+++PL +A+++L++V K+ +PF RF GGVGR AQAK+ + + GRWP KSA+F+L LLKNAE+NA+ +GLDVD L + HIQVN+A RRRTYRAHGRINPYMSSPCHIEL+L+ Sbjct: 4 YAKEPDNPAKSCKARGSNLRVHFKNTRETALAIKRMPLRRAQKFLKNVCEKKECVPFRRFNGGVGRCAQAKHWNTS-VGRWPKKSAEFLLQLLKNAEANADYRGLDVDRLVVDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIELSLT 151
BLAST of CX053630 vs. ExPASy Swiss-Prot
Match: RL17_AEDAE (60S ribosomal protein L17 OS=Aedes aegypti GN=RpL17 PE=2 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 7.177e-54 Identity = 101/149 (67.79%), Postives = 126/149 (84.56%), Query Frame = -3 Query: 316 YSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 762 Y+KEPDNP KSCKARGS+LRVHFKNTRETA AI+++PL +A+++L++V K+ +PF RF GGVGR AQAK+ + + GRWP KSA+F+L LLKNAE+NA+ +GLDVD L + HIQVN+A RRRTYRAHGRINPYMSSPCHIEL+L+ Sbjct: 4 YAKEPDNPAKSCKARGSNLRVHFKNTRETALAIKRMPLRRAQKFLKNVCEKKECVPFRRFNGGVGRCAQAKHWNTS-VGRWPKKSAEFLLQLLKNAEANADYRGLDVDRLVVDHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIELSLT 151
BLAST of CX053630 vs. ExPASy Swiss-Prot
Match: RL17_ANOGA (60S ribosomal protein L17 OS=Anopheles gambiae GN=RpL17 PE=3 SV=1) HSP 1 Score: 209.92 bits (533), Expect = 1.224e-53 Identity = 102/149 (68.46%), Postives = 126/149 (84.56%), Query Frame = -3 Query: 316 YSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 762 Y+KEPDN +KSCK+RGS+LRVHFKNTRETA AI+++PL +A+R+L++V+ K+ +PF RF GGVGR AQAK+ GRWP KSA+F+L LLKNAE+NA+ KGLDVD L I+HIQVN+A RRRTYRAHGRINPYMSSPCHIEL+L+ Sbjct: 4 YAKEPDNASKSCKSRGSNLRVHFKNTRETALAIKRMPLRRAQRFLKNVIEKKECVPFRRFNGGVGRCAQAKH-WGTSVGRWPKKSAEFLLQLLKNAEANADYKGLDVDRLVINHIQVNRAPCLRRRTYRAHGRINPYMSSPCHIELSLT 151
BLAST of CX053630 vs. ExPASy Swiss-Prot
Match: RL17_CAEEL (60S ribosomal protein L17 OS=Caenorhabditis elegans GN=rpl-17 PE=2 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 3.562e-53 Identity = 102/149 (68.46%), Postives = 117/149 (78.52%), Query Frame = -3 Query: 316 YSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 762 YS+ P+N TKSCKARGSDLRVHFKNT E A A+R +PL +A+ +L V HK+ +PF RF GG+GR AQ K + QGRWPVKSA F+LDLLKNAESNAE KGLDVD L I HI V +A K RRRTYRAHGRINPYMSSPCHIE+ L+ Sbjct: 6 YSRAPENSTKSCKARGSDLRVHFKNTHEAAMALRGMPLRRAQAFLNHVKEHKEIVPFRRFHGGIGRAAQTKQWNTT-QGRWPVKSADFLLDLLKNAESNAEYKGLDVDHLVIEHINVQRAAKLRRRTYRAHGRINPYMSSPCHIEVILA 153 The following BLAST results are available for this feature:
BLAST of CX053630 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 88
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Sequences
The
following sequences are available for this feature:
EST sequence >CX053630 ID=CX053630; Name=CX053630; organism=Citrus sinensis; type=EST; length=764bpback to top |