CX053627
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX053627 vs. ExPASy Swiss-Prot
Match: IF4A_YARLI (ATP-dependent RNA helicase eIF4A OS=Yarrowia lipolytica GN=TIF1 PE=3 SV=1) HSP 1 Score: 280.796 bits (717), Expect = 6.800e-75 Identity = 139/225 (61.78%), Postives = 169/225 (75.11%), Query Frame = 1 Query: 184 LLSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPVRILVKRDE 858 L D T+YDEV SFD +GL++ LLRGIY YGFE PS+IQQR I+P KG DV+ QAQSGTGKTATF LQ +D + + QAL++APTRELA QI+KV+ A G+Y+ ++ HAC+GGTSV ED R++Q GVHV+VGTPGR+ DM+ R+ L+ D IKMF+LDEADEMLSR FKD IYDIF LP Q + SATMP E L+IT KFM PVRILVK+DE Sbjct: 5 LTDIDSSQITTNYDEVVTSFDDLGLKDELLRGIYGYGFENPSSIQQRAILPVIKGNDVLAQAQSGTGKTATFSISALQNIDEKIKKPQALIIAPTRELAHQIQKVVLAFGEYMKIECHACIGGTSVAEDIRVIQEGVHVIVGTPGRIHDMIERRILKTDLIKMFILDEADEMLSREFKDPIYDIFTTLPETTQTVLLSATMPAEVLDITGKFMRDPVRILVKKDE 229
BLAST of CX053627 vs. ExPASy Swiss-Prot
Match: IF4A_CRYNE (ATP-dependent RNA helicase eIF4A OS=Cryptococcus neoformans GN=TIF1 PE=3 SV=1) HSP 1 Score: 280.796 bits (717), Expect = 6.800e-75 Identity = 143/224 (63.84%), Postives = 173/224 (77.23%), Query Frame = 1 Query: 187 LSTDGQDFFTSYDEVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPVRILVKRDE 858 L DG ++++EV D+FD M L+ LLRGIYAYGFE+PSAIQQR I+P G D I QAQSGTGKTATF ILQ++D + + QALVLAPTRELAQQI+KV+ ALGDYL V HACVGGT+VRED L G H+VVGTPGRVFDM+ R +L+ + + MF LDEADEMLS GFK+ IY+IFQLLP + QV + SATM PE L++T+KFM P+RILVK+DE Sbjct: 12 LQIDGDLINSNWNEVVDNFDDMKLKGELLRGIYAYGFERPSAIQQRAIMPIVTGRDCIAQAQSGTGKTATFSVSILQRIDTTVKKTQALVLAPTRELAQQIQKVVIALGDYLNVDCHACVGGTAVREDIARLNEGPHIVVGTPGRVFDMINRGALKTEAVMMFCLDEADEMLSTGFKESIYEIFQLLPGETQVVLLSATMAPEVLDVTKKFMRDPIRILVKKDE 235
BLAST of CX053627 vs. ExPASy Swiss-Prot
Match: IF4A3_XENTR (Eukaryotic initiation factor 4A-III OS=Xenopus tropicalis GN=eif4a3 PE=2 SV=1) HSP 1 Score: 280.026 bits (715), Expect = 1.160e-74 Identity = 144/219 (65.75%), Postives = 173/219 (79.00%), Query Frame = 1 Query: 205 DFFTSYD-EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPVRILVKRDE 858 +F TS + +V +FD MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGTGKTATFC +LQ LD + + QAL+LAPTRELA QI+KV+ ALGDY+ V+ HAC+GGT+V ED R L G HVV GTPGRVFDM+RR+SLR IKM VLDEADEML++GFK+QIYD+++ LP QV + SAT+P E LE+T KFM P+RILVKRDE Sbjct: 31 EFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKVLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVCLISATLPHEILEMTNKFMTDPIRILVKRDE 249
BLAST of CX053627 vs. ExPASy Swiss-Prot
Match: IF4A3_DANRE (Eukaryotic initiation factor 4A-III OS=Danio rerio GN=eif4a3 PE=2 SV=1) HSP 1 Score: 280.026 bits (715), Expect = 1.160e-74 Identity = 144/219 (65.75%), Postives = 173/219 (79.00%), Query Frame = 1 Query: 205 DFFTSYD-EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPVRILVKRDE 858 +F TS + +V +FD MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGTGKTATFC +LQ LD + + QAL+LAPTRELA QI+KV+ ALGDY+ V+ HAC+GGT+V ED R L G HVV GTPGRVFDM+RR+SLR IKM VLDEADEML++GFK+QIYD+++ LP QV + SAT+P E LE+T KFM P+RILVKRDE Sbjct: 22 EFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKVLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVCLISATLPHEILEMTNKFMTDPIRILVKRDE 240
BLAST of CX053627 vs. ExPASy Swiss-Prot
Match: I4A3A_XENLA (Eukaryotic initiation factor 4A-III-A OS=Xenopus laevis GN=eif4a3-A PE=2 SV=1) HSP 1 Score: 280.026 bits (715), Expect = 1.160e-74 Identity = 144/219 (65.75%), Postives = 173/219 (79.00%), Query Frame = 1 Query: 205 DFFTSYD-EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPVRILVKRDE 858 +F TS + +V +FD MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGTGKTATFC +LQ LD + + QAL+LAPTRELA QI+KV+ ALGDY+ V+ HAC+GGT+V ED R L G HVV GTPGRVFDM+RR+SLR IKM VLDEADEML++GFK+QIYD+++ LP QV + SAT+P E LE+T KFM P+RILVKRDE Sbjct: 31 EFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKVLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVCLISATLPHEILEMTNKFMTDPIRILVKRDE 249
BLAST of CX053627 vs. ExPASy Swiss-Prot
Match: I4A3B_XENLA (Eukaryotic initiation factor 4A-III-B OS=Xenopus laevis GN=eif4a3-B PE=2 SV=1) HSP 1 Score: 279.256 bits (713), Expect = 1.978e-74 Identity = 142/219 (64.84%), Postives = 174/219 (79.45%), Query Frame = 1 Query: 205 DFFTSYD-EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPVRILVKRDE 858 +F TS + +V +FD MGL+E+LLRGIYAYGFEKPSAIQQ+ I KG DVI Q+QSGTGKTATFC +LQ LD + + QAL+LAPT+ELA+QI+KV+ ALGDY+ V+ HAC+GGT+V ED R L G HVV GTPGRVFDM+RR+SLR IKM VLDEADEML++GFK+QIYD+++ LP QV + SAT+P E LE+T KFM P+RILVKRDE Sbjct: 30 EFQTSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQKAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQIRETQALILAPTKELARQIQKVLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVCLISATLPHEILEMTNKFMTDPIRILVKRDE 248
BLAST of CX053627 vs. ExPASy Swiss-Prot
Match: IF4A3_SALSA (Eukaryotic initiation factor 4A-III OS=Salmo salar GN=eif4a3 PE=2 SV=1) HSP 1 Score: 278.87 bits (712), Expect = 2.584e-74 Identity = 143/219 (65.30%), Postives = 173/219 (79.00%), Query Frame = 1 Query: 205 DFFTSYD-EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPVRILVKRDE 858 +F TS + +V +FD MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGTGKTATFC +LQ LD + + QAL+LAPTRELA QI+KV+ ALGDY+ V+ H+C+GGT+V ED R L G HVV GTPGRVFDM+RR+SLR IKM VLDEADEML++GFK+QIYD+++ LP QV + SAT+P E LE+T KFM P+RILVKRDE Sbjct: 22 EFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKVLLALGDYMNVQCHSCIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVCLISATLPHEILEMTNKFMTDPIRILVKRDE 240
BLAST of CX053627 vs. ExPASy Swiss-Prot
Match: IF4A3_RAT (Eukaryotic initiation factor 4A-III OS=Rattus norvegicus GN=Eif4a3 PE=1 SV=1) HSP 1 Score: 274.248 bits (700), Expect = 6.364e-73 Identity = 148/248 (59.68%), Postives = 181/248 (72.98%), Query Frame = 1 Query: 118 MAGLAPEGSQFDARQYDTKMNELLSTDGQDFFTSYD-EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPVRILVKRDE 858 MA A + AR+ K ++ + F TS + +V +FD MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGTGKTATF +LQ LD + + QAL+LAPTRELA QI+K + ALGDY+ V+ HAC+GGT+V ED R L G HVV GTPGRVFDM+RR+SLR IKM VLDEADEML++GFK+QIYD+++ LP QV + SAT+P E LE+T KFM P+RILVKRDE Sbjct: 1 MAATATMATSGSARKRLLKEEDMTKVE---FETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDE 245
BLAST of CX053627 vs. ExPASy Swiss-Prot
Match: IF4A3_PIG (Eukaryotic initiation factor 4A-III OS=Sus scrofa GN=EIF4A3 PE=2 SV=1) HSP 1 Score: 274.248 bits (700), Expect = 6.364e-73 Identity = 148/248 (59.68%), Postives = 181/248 (72.98%), Query Frame = 1 Query: 118 MAGLAPEGSQFDARQYDTKMNELLSTDGQDFFTSYD-EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPVRILVKRDE 858 MA A + AR+ K ++ + F TS + +V +FD MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGTGKTATF +LQ LD + + QAL+LAPTRELA QI+K + ALGDY+ V+ HAC+GGT+V ED R L G HVV GTPGRVFDM+RR+SLR IKM VLDEADEML++GFK+QIYD+++ LP QV + SAT+P E LE+T KFM P+RILVKRDE Sbjct: 1 MAATATMATSGSARKRLLKEEDMTKVE---FETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDE 245
BLAST of CX053627 vs. ExPASy Swiss-Prot
Match: IF4A3_BOVIN (Eukaryotic initiation factor 4A-III OS=Bos taurus GN=EIF4A3 PE=2 SV=3) HSP 1 Score: 274.248 bits (700), Expect = 6.364e-73 Identity = 148/248 (59.68%), Postives = 181/248 (72.98%), Query Frame = 1 Query: 118 MAGLAPEGSQFDARQYDTKMNELLSTDGQDFFTSYD-EVYDSFDAMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIKMFVLDEADEMLSRGFKDQIYDIFQLLPAKVQVGVFSATMPPEALEITRKFMNKPVRILVKRDE 858 MA A + AR+ K ++ + F TS + +V +FD MGL+E+LLRGIYAYGFEKPSAIQQR I KG DVI Q+QSGTGKTATF +LQ LD + + QAL+LAPTRELA QI+K + ALGDY+ V+ HAC+GGT+V ED R L G HVV GTPGRVFDM+RR+SLR IKM VLDEADEML++GFK+QIYD+++ LP QV + SAT+P E LE+T KFM P+RILVKRDE Sbjct: 1 MAATATMATSGSARKRLLKEEDMTKVE---FETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDE 245 The following BLAST results are available for this feature:
BLAST of CX053627 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX053627 ID=CX053627; Name=CX053627; organism=Citrus sinensis; type=EST; length=859bpback to top |