DR403565

Overview
NameDR403565
Unique NameDR403565
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Mature Albedocdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403565 vs. ExPASy Swiss-Prot
Match: BPT1_YEAST (Bile pigment transporter 1 OS=Saccharomyces cerevisiae GN=BPT1 PE=1 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 2.884e-28
Identity = 68/161 (42.24%), Postives = 98/161 (60.87%), Query Frame = 2
Query:    2 GTVRYNXXPLSQHTDQEIWEVLAKCHL-------------GEAVREKENG----LDSLVVEDGSNWSMGQWQLFCLGRALLRRSRILVLDEATASIDNATDMILQKTIRAEFADCTVITVAHRIPTVMDCTMVLAISDGKLAEYDEPMKLMKMEGSLFRQL 433
            GTV+ N  P +++++ E+   + + HL             G+   E++      LD  + E+GSN S+GQ QL CL RALL RS+ILVLDEATAS+D  TD I+Q TIR EF D T++T+AHRI TV+D   ++ +  G + E+D P KL+  + S+F  L
Sbjct: 1391 GTVKTNLDPFNRYSEDELKRAVEQAHLKPHLEKMLHSKPRGDDSNEEDGNVNDILDVKINENGSNLSVGQRQLLCLARALLNRSKILVLDEATASVDMETDKIIQDTIRREFKDRTILTIAHRIDTVLDSDKIIVLDQGSVREFDSPSKLLSDKTSIFYSL 1551          
BLAST of DR403565 vs. ExPASy Swiss-Prot
Match: ABCCF_DICDI (ABC transporter C family member 15 OS=Dictyostelium discoideum GN=abcC15 PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 8.393e-28
Identity = 62/146 (42.47%), Postives = 92/146 (63.01%), Query Frame = 2
Query:    2 GTVRYNXXPLSQHTDQEIWEVLAKCHLGEAVREKENGLDSLVVEDGSNWSMGQWQLFCLGRALLRRSRILVLDEATASIDNATDMILQKTIRAEFADCTVITVAHRIPTVMDCTMVLAISDGKLAEYDEPMKLMKMEGSLFRQLVR 439
            G++R N  P  Q TD EIWE L+K  L + V      L+SLV + G   ++G  QL CL RA+LR S+I++ DEAT SID  T  ++++TI   F DCT++T+AH I T++D   +  I +G+L E+D P+ L+K   S F +L++
Sbjct: 1282 GSIRLNLDPFDQFTDNEIWEALSKVKLKKMVSTMPMKLESLV-QGGDGLTIGNKQLLCLCRAILRNSKIVLFDEATNSIDFQTTRLIKQTIEENFKDCTILTIAHNIDTILDSDKIAIIDEGELIEFDTPLNLIKDSTSRFSKLIK 1426          
BLAST of DR403565 vs. ExPASy Swiss-Prot
Match: AB13C_ARATH (ABC transporter C family member 13 OS=Arabidopsis thaliana GN=ABCC13 PE=2 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 2.442e-27
Identity = 69/146 (47.26%), Postives = 89/146 (60.96%), Query Frame = 2
Query:    2 GTVRYNXXPLSQHTDQEIWEVLAKCHLGEAVREKENGLDSLVVEDGSNWSMGQWQLFCLGRALLRRSRILVLDEATASIDNATDMILQKTIRAEFADCTVITVAHRIPTVMDCTMVLAISDGKLAEYDEPMKLMKMEGSLFRQLVR 439
            G++R N  PL    D  IWE+L KC +  AV E   GLDS V E G ++S+GQ QL CL RALL+ S+IL LDE TA+ID  T  +L  TI +E    TVIT+AHRI TV+D   +L +  G L E  +P  L++ + S F   VR
Sbjct: 1047 GSLRDNLDPLGLSEDWRIWEILDKCKVKAAV-ESVGGLDSYVKESGCSFSVGQRQLLCLARALLKSSKILCLDECTANIDVHTASLLHNTISSECKGVTVITIAHRISTVVDLDSILILDRGILVEQGKPQHLLQDDSSTFSSFVR 1191          
BLAST of DR403565 vs. ExPASy Swiss-Prot
Match: MRP6_HUMAN (Multidrug resistance-associated protein 6 OS=Homo sapiens GN=ABCC6 PE=1 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 1.750e-25
Identity = 60/147 (40.82%), Postives = 91/147 (61.90%), Query Frame = 2
Query:    2 GTVRYNXXPLSQHTDQEIWEVLAKCHLGEAVREKENGLDSLVVEDGSNWSMGQWQLFCLGRALLRRSRILVLDEATASIDNATDMILQKTIRAEFADCTVITVAHRIPTVMDCTMVLAISDGKLAEYDEPMKLMKMEGSLFRQLVRE 442
            G++R N   L +H+D+ IW  L    L   V      L     + G + S+GQ QL CL RALLR+++IL+LDEATA++D  T++ +Q  + + FA CTV+ +AHR+ +VMDC  VL +  G++AE   P +L+  +G LF +L +E
Sbjct: 1354 GSLRMNLDLLQEHSDEAIWAALETVQLKALVASLPGQLQYKCADRGEDLSVGQKQLLCLARALLRKTQILILDEATAAVDPGTELQMQAMLGSWFAQCTVLLIAHRLRSVMDCARVLVMDKGQVAESGSPAQLLAQKG-LFYRLAQE 1499          
BLAST of DR403565 vs. ExPASy Swiss-Prot
Match: CFTR_CERAE (Cystic fibrosis transmembrane conductance regulator OS=Cercopithecus aethiops GN=CFTR PE=3 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.286e-25
Identity = 60/145 (41.38%), Postives = 88/145 (60.69%), Query Frame = 2
Query:    2 GTVRYNXXPLSQHTDQEIWEVLAKCHLGEAVREKENGLDSLVVEDGSNWSMGQWQLFCLGRALLRRSRILVLDEATASIDNATDMILQKTIRAEFADCTVITVAHRIPTVMDCTMVLAISDGKLAEYDEPMKLMKMEGSLFRQLV 436
            GT R N  P  Q +DQEIWEV  +  L   + +    LD ++V+ G   S G  QL CL R++L +++IL+LDE +A +D  T  I+++T++  FADCTVI   HRI  +++C   L I + K+ +YD   KL+  E SLFRQ +
Sbjct: 1299 GTFRKNLDPYEQWSDQEIWEVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRTLKQAFADCTVILCEHRIEAMLECQQFLVIEENKVRQYDSIQKLLN-ERSLFRQAI 1442          
BLAST of DR403565 vs. ExPASy Swiss-Prot
Match: MDR_LEITA (Multidrug resistance protein OS=Leishmania tarentolae GN=PGPA PE=3 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 2.985e-25
Identity = 62/151 (41.06%), Postives = 90/151 (59.60%), Query Frame = 2
Query:    2 GTVRYNXXPLSQHTDQEIWEVLAKCHLGEAVREKENGLDSLVVEDGSNWSMGQWQLFCLGRALLRR-SRILVLDEATASIDNATDMILQKTIRAEFADCTVITVAHRIPTVMDCTMVLAISDGKLAEYDEPMKLMKMEGSLFRQLVREYWS 451
            GTVR N  P  + +  E+W  L    L E V  +  G+DS V+E GSN+S+GQ QL C+ RALL+R S  +++DEATA+ID A D  +Q T+ + F+  TVIT+AHR+ TV     ++ +  G +AE   P +L+    S+F  +V    S
Sbjct: 1375 GTVRQNVDPFLEASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKRGSGFILMDEATANIDPALDRQIQATVMSAFSAYTVITIAHRLHTVAQYDKIIVMDHGVVAEMGSPRELVMNHQSMFHSMVESLGS 1525          
BLAST of DR403565 vs. ExPASy Swiss-Prot
Match: MRP6_MOUSE (Multidrug resistance-associated protein 6 OS=Mus musculus GN=Abcc6 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.092e-25
Identity = 57/142 (40.14%), Postives = 84/142 (59.15%), Query Frame = 2
Query:    2 GTVRYNXXPLSQHTDQEIWEVLAKCHLGEAVREKENGLDSLVVEDGSNWSMGQWQLFCLGRALLRRSRILVLDEATASIDNATDMILQKTIRAEFADCTVITVAHRIPTVMDCTMVLAISDGKLAEYDEPMKLMKMEGSLFR 427
            G++R N   L +HTD+ IW  L    L   V      L       G + S+G  QL CL RALLR+++IL+LDEATAS+D  T+M +Q  +   F  CT++ +AHR+ +VMDC  VL + +G++AE   P +L+  +G  +R
Sbjct: 1349 GSLRMNLDLLQEHTDEGIWAALETVQLKAFVTSLPGQLQYECAGQGDDLSVGHKQLLCLARALLRKTQILILDEATASVDPGTEMQMQAALERWFTQCTLLLIAHRLRSVMDCARVLVMDEGQVAESGNPAQLLAQKGLFYR 1490          
BLAST of DR403565 vs. ExPASy Swiss-Prot
Match: CFTR_PAPAN (Cystic fibrosis transmembrane conductance regulator OS=Papio anubis GN=CFTR PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.650e-25
Identity = 59/145 (40.69%), Postives = 88/145 (60.69%), Query Frame = 2
Query:    2 GTVRYNXXPLSQHTDQEIWEVLAKCHLGEAVREKENGLDSLVVEDGSNWSMGQWQLFCLGRALLRRSRILVLDEATASIDNATDMILQKTIRAEFADCTVITVAHRIPTVMDCTMVLAISDGKLAEYDEPMKLMKMEGSLFRQLV 436
            GT R N  P  Q +DQEIW+V  +  L   + +    LD ++V+ G   S G  QL CL R++L +++IL+LDE +A +D  T  I+++T++  FADCTVI   HRI  +++C   L I + K+ +YD   KL+  E SLFRQ +
Sbjct: 1299 GTFRKNLDPYEQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRTLKQAFADCTVILCEHRIEAMLECQQFLVIEENKVRQYDSIQKLLN-ERSLFRQAI 1442          
BLAST of DR403565 vs. ExPASy Swiss-Prot
Match: CFTR_MACMU (Cystic fibrosis transmembrane conductance regulator OS=Macaca mulatta GN=CFTR PE=2 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 6.650e-25
Identity = 59/145 (40.69%), Postives = 88/145 (60.69%), Query Frame = 2
Query:    2 GTVRYNXXPLSQHTDQEIWEVLAKCHLGEAVREKENGLDSLVVEDGSNWSMGQWQLFCLGRALLRRSRILVLDEATASIDNATDMILQKTIRAEFADCTVITVAHRIPTVMDCTMVLAISDGKLAEYDEPMKLMKMEGSLFRQLV 436
            GT R N  P  Q +DQEIW+V  +  L   + +    LD ++V+ G   S G  QL CL R++L +++IL+LDE +A +D  T  I+++T++  FADCTVI   HRI  +++C   L I + K+ +YD   KL+  E SLFRQ +
Sbjct: 1299 GTFRKNLDPYEQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRTLKQAFADCTVILCEHRIEAMLECQQFLVIEENKVRQYDSIQKLLN-ERSLFRQAI 1442          
BLAST of DR403565 vs. ExPASy Swiss-Prot
Match: CFTR_MACFU (Cystic fibrosis transmembrane conductance regulator OS=Macaca fuscata fuscata GN=CFTR PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.650e-25
Identity = 59/145 (40.69%), Postives = 88/145 (60.69%), Query Frame = 2
Query:    2 GTVRYNXXPLSQHTDQEIWEVLAKCHLGEAVREKENGLDSLVVEDGSNWSMGQWQLFCLGRALLRRSRILVLDEATASIDNATDMILQKTIRAEFADCTVITVAHRIPTVMDCTMVLAISDGKLAEYDEPMKLMKMEGSLFRQLV 436
            GT R N  P  Q +DQEIW+V  +  L   + +    LD ++V+ G   S G  QL CL R++L +++IL+LDE +A +D  T  I+++T++  FADCTVI   HRI  +++C   L I + K+ +YD   KL+  E SLFRQ +
Sbjct: 1299 GTFRKNLDPYEQWSDQEIWKVADEVGLRSVIEQFPGKLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQIIRRTLKQAFADCTVILCEHRIEAMLECQQFLVIEENKVRQYDSIQKLLN-ERSLFRQAI 1442          
The following BLAST results are available for this feature:
BLAST of DR403565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 318
Match NameE-valueIdentityDescription
BPT1_YEAST2.884e-2842.24Bile pigment transporter 1 OS=Saccharomyces cerevi... [more]
ABCCF_DICDI8.393e-2842.47ABC transporter C family member 15 OS=Dictyosteliu... [more]
AB13C_ARATH2.442e-2747.26ABC transporter C family member 13 OS=Arabidopsis ... [more]
MRP6_HUMAN1.750e-2540.82Multidrug resistance-associated protein 6 OS=Homo ... [more]
CFTR_CERAE2.286e-2541.38Cystic fibrosis transmembrane conductance regulato... [more]
MDR_LEITA2.985e-2541.06Multidrug resistance protein OS=Leishmania tarento... [more]
MRP6_MOUSE5.092e-2540.14Multidrug resistance-associated protein 6 OS=Mus m... [more]
CFTR_PAPAN6.650e-2540.69Cystic fibrosis transmembrane conductance regulato... [more]
CFTR_MACMU6.650e-2540.69Cystic fibrosis transmembrane conductance regulato... [more]
CFTR_MACFU6.650e-2540.69Cystic fibrosis transmembrane conductance regulato... [more]

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Properties
Property NameValue
Genbank descriptionCSAC-PNP1241I03 Mature Albedo Citrus sinensis cDNA clone CSAC-PNP1241I03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403565 ID=DR403565; Name=DR403565; organism=Citrus sinensis; type=EST; length=742bp
GGGGACCGTGAGATATAATTNNNNNCCCTTGTCGCAACATACAGACCAGG
AAATATGGGAGGTTCTTGCAAAGTGTCATCTTGGAGAGGCTGTCCGCGAG
AAAGAAAATGGCCTAGACTCCTTAGTTGTGGAAGACGGATCAAACTGGAG
TATGGGGCAATGGCAACTGTTCTGTTTGGGCCGTGCTCTTTTGAGGAGAA
GCCGCATATTGGTGCTTGACGAAGCAACTGCATCAATTGATAATGCAACT
GACATGATTCTGCAGAAAACTATTCGTGCAGAATTTGCTGATTGCACTGT
TATCACAGTAGCTCACAGGATTCCAACAGTGATGGATTGCACTATGGTAC
TTGCCATTAGTGATGGTAAACTAGCGGAGTATGATGAGCCAATGAAGTTA
ATGAAGATGGAAGGTTCACTCTTCAGGCAGCTAGTAAGGGAATACTGGTC
GCATTTGCACTCTGCAGAATCACATTGAGGCTACCGATTATTTCTTTTGT
ACTTCTTTAATATCTCTTTGCTGTTAATTTTCTATTGCTTTAACAGCAAA
GAGAAATTAAAAGTGTAAGTAGATGTATAGTATCCCTTTAGCATAGCCCG
GCTAGTGAGAACAAAAAAGGAAGAGGAATGTTTTTCCCTTCATTAGGTTT
AGTTTGCTGAATTGTGTGCACCCAGGCTTCCTTGTTAATTTACAGAAGCC
AATGTGTTCTGTAATTGTGCCAATTTTTCATAAAAACAATTT
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