DR403501
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR403501 vs. ExPASy Swiss-Prot
Match: PPR15_ARATH (Pentatricopeptide repeat-containing protein At1g06145 OS=Arabidopsis thaliana GN=EMB1444 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 8.495e-12 Identity = 37/114 (32.46%), Postives = 64/114 (56.14%), Query Frame = 2 Query: 5 GALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAK-APGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTET 343 GALL C IHK+ +A +A KL L+P N GY+ LL ++Y+ + + A +R +++ + K PG + I + H+F + D+ H S + +L+++ +M AG+ ET Sbjct: 460 GALLDGCRIHKNLVIAEIAFNKLMVLEPMNSGYYFLLVSMYAEQNRWRDVAEIRGRMRELGIEKICPGTSSIRIDKRDHLFAAADKSHSASDEVCLLLDEIYDQMGLAGYVQET 573
BLAST of DR403501 vs. ExPASy Swiss-Prot
Match: PP345_ARATH (Pentatricopeptide repeat-containing protein At4g32430, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E40 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.109e-11 Identity = 36/112 (32.14%), Postives = 66/112 (58.93%), Query Frame = 2 Query: 8 ALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTP-----HVFTSGDQLHPQSTAIYAMLEKLNGKMREAG 328 ++LG+C +H + + +E E+ PE G +V + NIY+ + ++ +AA +R+ ++K+ ++K G + I+VG T F+SGD+ HP+S IY M+E + +M G Sbjct: 648 SMLGSCRLHGNVKMGAKVAELAMEMKPELSGSYVQMYNIYAEKEEWDKAAEIRKAMRKKNVSKEAGFSWIDVGDTEGSLTMQGFSSGDKSHPKSDEIYRMVEIIGLEMNLEG 759
BLAST of DR403501 vs. ExPASy Swiss-Prot
Match: PP201_ARATH (Pentatricopeptide repeat-containing protein At2g44880 OS=Arabidopsis thaliana GN=PCMP-E9 PE=2 SV=2) HSP 1 Score: 70.0922 bits (170), Expect = 1.449e-11 Identity = 38/105 (36.19%), Postives = 58/105 (55.24%), Query Frame = 2 Query: 8 ALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMRE 322 + L AC +KD A +K EL+P+N G +VLL N+Y+A++ + V+ V++K + K GC+LIE+ F SGD HP +I+ +L L M E Sbjct: 446 SFLSACGQYKDIERAERILKKAVELEPQNDGNYVLLRNLYAADKRWDDFGMVKNVMRKNQAKKEVGCSLIEINYIVSEFISGDTTHPHRRSIHLVLGDLLMHMNE 550
BLAST of DR403501 vs. ExPASy Swiss-Prot
Match: PP268_ARATH (Putative pentatricopeptide repeat-containing protein At3g47840 OS=Arabidopsis thaliana GN=PCMP-E43 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.216e-11 Identity = 39/96 (40.62%), Postives = 55/96 (57.29%), Query Frame = 2 Query: 11 LLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLE 298 LL AC D R A+E++ ELDP V L+NIYS+ + +AA VR+ +K + + K PG + I++ F SGD+ HPQS IY +LE Sbjct: 586 LLIACKAKGDIERGRRAAERILELDPTCATALVTLANIYSSTGNLEEAANVRKNMKAKGVIKEPGWSSIKIKDCVSAFVSGDRFHPQSEDIYNILE 681
BLAST of DR403501 vs. ExPASy Swiss-Prot
Match: PP207_ARATH (Pentatricopeptide repeat-containing protein At3g02330 OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 5.506e-11 Identity = 36/104 (34.62%), Postives = 60/104 (57.69%), Query Frame = 2 Query: 11 LLGACMIHKDT-NLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMR 319 LLG C IH++ +A A+ L LDP++ + LLSN+Y+ + + + +R+ ++ KL K PGC+ +E+ HVF GD+ HP+ IY L + +M+ Sbjct: 778 LLGVCTIHRNNVEVAEEATAALLRLDPQDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHPRWEEIYEELGLIYSEMK 881
BLAST of DR403501 vs. ExPASy Swiss-Prot
Match: PP431_ARATH (Pentatricopeptide repeat-containing protein At5g55740, chloroplastic OS=Arabidopsis thaliana GN=CRR21 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.392e-11 Identity = 35/101 (34.65%), Postives = 56/101 (55.45%), Query Frame = 2 Query: 8 ALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTP--HVFTSGDQLHPQSTAIYAMLEKL 304 +L+ +C + T L S KL E +PEN G +V +SN Y+ E + + +R+++K + L K PGC+ I++ G HVF + D+ H + I ML L Sbjct: 721 SLVASCNKQRKTELVDYLSRKLLESEPENSGNYVTISNAYAVEGSWDEVVKMREMMKAKGLKKKPGCSWIQITGEEGVHVFVANDKTHTRINEIQMMLALL 821
BLAST of DR403501 vs. ExPASy Swiss-Prot
Match: PP280_ARATH (Pentatricopeptide repeat-containing protein At3g53360, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E86 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.392e-11 Identity = 34/102 (33.33%), Postives = 59/102 (57.84%), Query Frame = 2 Query: 11 LLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKM 316 LL AC + +LA+ A+E + ++DP N HVLL +++++ ++ AA +R +KK + K PG + IE+ H+F + D HP+ IY +L + +M Sbjct: 648 LLSACKTQGNVHLAQKAAENILKIDPFNSTAHVLLCSMHASSGNWENAALLRSSMKKHDVKKIPGQSWIEIEDKIHIFFAEDIFHPERDDIYTVLHNIWSQM 749 The following BLAST results are available for this feature:
BLAST of DR403501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403501 ID=DR403501; Name=DR403501; organism=Citrus sinensis; type=EST; length=746bpback to top |