DR403501
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR403501 vs. ExPASy Swiss-Prot
Match: PP429_ARATH (Putative pentatricopeptide repeat-containing protein At5g52630 OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.073e-42 Identity = 88/200 (44.00%), Postives = 120/200 (60.00%), Query Frame = 2 Query: 5 GALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTAXXXXXXXXXXXXXXXXSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKDGVCSCGDYW 604 GALL +C +HK+T LA A++K+FEL P + G H+ LSN Y+A+ + AA R++++ R K G + +E H F +G++ H +S IY L +L +M +AG+ +T SE+LAIAFGLI IR++KNLRVC DCH A KF+S T RVI+VRD NRFH F+DG CSC DYW Sbjct: 389 GALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDRGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLREVDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVIIVRDNNRFHRFEDGKCSCNDYW 588
BLAST of DR403501 vs. ExPASy Swiss-Prot
Match: PP140_ARATH (Pentatricopeptide repeat-containing protein At2g01510, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=2 SV=1) HSP 1 Score: 172.555 bits (436), Expect = 2.073e-42 Identity = 87/200 (43.50%), Postives = 119/200 (59.50%), Query Frame = 2 Query: 5 GALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTAXXXXXXXXXXXXXXXXSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKDGVCSCGDYW 604 GALLGAC +H+D L + ++ L E P+ YHVLLSNIY+A + VR ++K K + +E G H F GD+ HPQS AIY L+++ K+R+ G+ +T + SEKLAIAFGLI PG IR++KNLR C DCH +KF+S +T I++RD NRFHHF++GVCSC ++W Sbjct: 385 GALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRKLGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHDVEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEIIMRDKNRFHHFRNGVCSCKEFW 584
BLAST of DR403501 vs. ExPASy Swiss-Prot
Match: PP267_ARATH (Pentatricopeptide repeat-containing protein At3g47530 OS=Arabidopsis thaliana GN=PCMP-H76 PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.536e-42 Identity = 85/199 (42.71%), Postives = 115/199 (57.79%), Query Frame = 2 Query: 11 LLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTE-TVTAXXXXXXXXXXXXXXXXSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKDGVCSCGDYW 604 LLGAC +H D L L EL E G +VLL N YS + + +R ++K++++ PGC+ IE+ GT H F D HP+ IY ML ++N +++ AG+ E T SEKLAIAFG++ T PGT IR+ KNLR C+DCH KF+S V R+++VRD +RFHHFK G CSC D+W Sbjct: 393 LLGACRVHGDVELGERVISHLIELKAEEAGDYVLLLNTYSTVGKWEKVTELRSLMKEKRIHTKPGCSAIELQGTVHEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYVAEITSELHNLESEEEKGYALRYHSEKLAIAFGILVTPPGTTIRVTKNLRTCVDCHNFAKFVSDVYDRIVIVRDRSRFHHFKGGSCSCNDFW 591
BLAST of DR403501 vs. ExPASy Swiss-Prot
Match: PP265_ARATH (Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana GN=CRR2 PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.536e-42 Identity = 91/200 (45.50%), Postives = 122/200 (61.00%), Query Frame = 2 Query: 5 GALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTAXXXXXXXXXXXXXXXXSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKDGVCSCGDYW 604 G+LLG+C IH + LA AS +LF L+P+N G +VLL++IY+ + + + V+++++ R L K PG +EV + F S D+ +P I+A L KL M+E G+ +T SEKLA+AFGLI T G IRI KNLR+C DCH TKFISK + I+VRD NRFH FK+GVCSCGDYW Sbjct: 458 GSLLGSCRIHGNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCWMEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVLGHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFKNGVCSCGDYW 657
BLAST of DR403501 vs. ExPASy Swiss-Prot
Match: PP284_ARATH (Pentatricopeptide repeat-containing protein At3g56550 OS=Arabidopsis thaliana GN=PCMP-H80 PE=2 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 6.032e-42 Identity = 86/199 (43.22%), Postives = 121/199 (60.80%), Query Frame = 2 Query: 11 LLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVT-AXXXXXXXXXXXXXXXXSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKDGVCSCGDYW 604 LLG+C IH++ L VA +KL +L+ N G +VL+++IYSA D A++R++++ L PG + IE+G H F D++HP+S IY+ L ++ + AG++ E SEKLAIA+GL+ T GT +RI KNLRVC DCH+ TK++SK R I+VRD RFHHF DG+CSC DYW Sbjct: 383 LLGSCKIHRNLELGEVAMKKLVQLEAFNAGDYVLMTSIYSAANDAQAFASMRKLIRSHDLQTVPGWSWIEIGDQVHKFVVDDKMHPESAVIYSELGEVINRAILAGYKPEDSNRTAPTLSDRCLGSADTSHSEKLAIAYGLMRTTAGTTLRITKNLRVCRDCHSFTKYVSKAFNREIIVRDRVRFHHFADGICSCNDYW 581
BLAST of DR403501 vs. ExPASy Swiss-Prot
Match: PP410_ARATH (Putative pentatricopeptide repeat-containing protein At5g40405 OS=Arabidopsis thaliana GN=PCMP-H14 PE=3 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.029e-41 Identity = 85/199 (42.71%), Postives = 123/199 (61.81%), Query Frame = 2 Query: 8 ALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTAXXXXXXXXXXXXXXXXSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKDGVCSCGDYW 604 +LL A ++K+ L +AS+K+ EL+ N G +VLLSNIY+ D+ + VRQ +K + + K PGC+++EV G H F GD+ HP+ T I A+ + ++ ++R AG++ +T SEK AIAFG+++ + IRI+KNLRVC DCH + ISK+ R I+VRD NRFHHFKDG CSC +W Sbjct: 414 SLLHASRMYKNLELGVLASKKMLELETANHGAYVLLSNIYADSNDWDNVSHVRQSMKSKGVRKQPGCSVMEVNGEVHEFFVGDKSHPKYTQIDAVWKDISRRLRLAGYKADTTPVMFDIDEEEKEDALCLHSEKAAIAFGIMSLKEDVPIRIVKNLRVCGDCHQVSMMISKIFNREIIVRDRNRFHHFKDGHCSCNGFW 612
BLAST of DR403501 vs. ExPASy Swiss-Prot
Match: PP364_ARATH (Pentatricopeptide repeat-containing protein At5g04780 OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2) HSP 1 Score: 170.244 bits (430), Expect = 1.029e-41 Identity = 84/200 (42.00%), Postives = 120/200 (60.00%), Query Frame = 2 Query: 5 GALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTAXXXXXXXXXXXXXXXXSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKDGVCSCGDYW 604 G+LL +C ++K+ LA VA+EKLFEL+PEN G HVLLSNIY+A + + + A R++++ + K G + I++ H F+ G+ HP+ I + L+ L K R+ G++ SEKLA+ FGL+ + +RI+KNLR+C+DCH K S T R I+VRD NRFHHF DG CSCGD+W Sbjct: 436 GSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
BLAST of DR403501 vs. ExPASy Swiss-Prot
Match: PP425_ARATH (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 1.344e-41 Identity = 82/199 (41.21%), Postives = 123/199 (61.81%), Query Frame = 2 Query: 8 ALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTAXXXXXXXXXXXXXXXXSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKDGVCSCGDYW 604 ALLGAC + + + + + L ++ P + G +V LSN+Y+++ ++ + + +R +K++ + K PGC+LI++ G H F D HP++ I +ML +++ K+R AG++ T SEK+A AFGLI+T PG IRI+KNLR+C DCH++ K ISKV R I VRD RFHHF+DG CSC DYW Sbjct: 448 ALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
BLAST of DR403501 vs. ExPASy Swiss-Prot
Match: PP347_ARATH (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana GN=PCMP-H53 PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 2.292e-41 Identity = 86/198 (43.43%), Postives = 119/198 (60.10%), Query Frame = 2 Query: 11 LLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCTLIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTAXXXXXXXXXXXXXXXXSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKDGVCSCGDYW 604 LL AC + DT + + KL EL+P + +VLLSN+Y+A + + R ++K K+ K PG + IEV H+F D+ + Q+ IY ++ + +++ G+ ET SEKLA+AFGL++T P T IR+IKNLRVC DCH A K+I+KV R IV+RDANRFH FKDG+CSCGDYW Sbjct: 793 LLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
BLAST of DR403501 vs. ExPASy Swiss-Prot
Match: PP417_ARATH (Pentatricopeptide repeat-containing protein At5g44230 OS=Arabidopsis thaliana GN=PCMP-H17 PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 3.910e-41 Identity = 82/201 (40.80%), Postives = 124/201 (61.69%), Query Frame = 2 Query: 5 GALLGACMIHKDTNLARVASEKLFELDPENVGYHVLLSNIYSAERDYLQAATVRQVVKKRKLAKAPGCT-LIEVGGTPHVFTSGDQLHPQSTAIYAMLEKLNGKMREAGFQTETVTAXXXXXXXXXXXXXXXXSEKLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKFISKVTGRVIVVRDANRFHHFKDGVCSCGDYW 604 GALLGAC IH + +A +A+E LFEL+P+ +G ++LLSN+Y++ D+ VR+++K++ L K P + +++ G H F G+ HP S I LE+L ++ G+Q + + +EKLA+AF L+ T + I I+KNLR+CLDCH + S+VTG+VI++RD RFHHF+ G CSCGD+W Sbjct: 457 GALLGACRIHNNPEIAEIAAEHLFELEPDIIGNYILLSNVYASAGDWGGVLRVRKLIKEKGLKKTPAVSWVVDKNGQMHKFFPGNLNHPMSNKIQDKLEELVERLTVLGYQPDLSSVPYDVSDNAKRLILIQHTEKLALAFSLLTTNRDSTITIMKNLRMCLDCHKFMRLASEVTGKVIIMRDNMRFHHFRSGDCSCGDFW 657 The following BLAST results are available for this feature:
BLAST of DR403501 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DR403501 ID=DR403501; Name=DR403501; organism=Citrus sinensis; type=EST; length=746bpback to top |