DR403425
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA1_MYXXA (Protein recA 1 OS=Myxococcus xanthus GN=recA1 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.846e-27 Identity = 56/108 (51.85%), Postives = 72/108 (66.67%), Query Frame = 2 Query: 341 SRFLDRQRALDAAMNDINSSFGKESVTRLGS-AGGALVETFPSGCLTLDLALG-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 S+ ++ +A+ AA+ I FG+ SV LG A V PSG + +D ALG GG P+GR+VE+FG ESSGKTTL LHAIA+VQ GG A +DAEHA D SY++ L Sbjct: 2 SKLAEKLKAVAAAVASIEKQFGRGSVMTLGGEAREQKVAVIPSGSVGVDRALGVGGYPRGRVVEVFGNESSGKTTLTLHAIAQVQAAGGVAAFIDAEHALDVSYARKL 109 HSP 2 Score: 40.4318 bits (93), Expect = 7.846e-27 Identity = 19/33 (57.58%), Postives = 23/33 (69.70%), Query Frame = 3 Query: 660 GVDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 GV VE L+V D GE ALEI + + RSGA+DL Sbjct: 110 GVRVEELLVSQPDTGEQALEITEHLVRSGAVDL 142
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_BORPE (Protein recA OS=Bordetella pertussis GN=recA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.931e-26 Identity = 53/104 (50.96%), Postives = 70/104 (67.31%), Query Frame = 2 Query: 353 DRQRALDAAMNDINSSFGKESVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 ++ +AL AA++ I FGK S+ R G ++ +G L LD+ALG GGLP+GR++E++GPESSGKTTL L IAE+QKLGG VDAEHA D Y+ L Sbjct: 12 EKAKALAAALSQIEKQFGKGSIMRYGDNEVEHDIQVVSTGSLGLDIALGVGGLPRGRVIEVYGPESSGKTTLTLQVIAEMQKLGGTCAFVDAEHALDVQYASKL 115 HSP 2 Score: 38.1206 bits (87), Expect = 2.931e-26 Identity = 16/33 (48.48%), Postives = 24/33 (72.73%), Query Frame = 3 Query: 660 GVDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 GV++ +L++ D GE ALEI D + RSG++DL Sbjct: 116 GVNLTDLLISQPDTGEQALEITDALVRSGSVDL 148
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_BORPA (Protein recA OS=Bordetella parapertussis GN=recA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.931e-26 Identity = 53/104 (50.96%), Postives = 70/104 (67.31%), Query Frame = 2 Query: 353 DRQRALDAAMNDINSSFGKESVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 ++ +AL AA++ I FGK S+ R G ++ +G L LD+ALG GGLP+GR++E++GPESSGKTTL L IAE+QKLGG VDAEHA D Y+ L Sbjct: 12 EKAKALAAALSQIEKQFGKGSIMRYGDNEVEHDIQVVSTGSLGLDIALGVGGLPRGRVIEVYGPESSGKTTLTLQVIAEMQKLGGTCAFVDAEHALDVQYASKL 115 HSP 2 Score: 38.1206 bits (87), Expect = 2.931e-26 Identity = 16/33 (48.48%), Postives = 24/33 (72.73%), Query Frame = 3 Query: 660 GVDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 GV++ +L++ D GE ALEI D + RSG++DL Sbjct: 116 GVNLTDLLISQPDTGEQALEITDALVRSGSVDL 148
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_BORBR (Protein recA OS=Bordetella bronchiseptica GN=recA PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.931e-26 Identity = 53/104 (50.96%), Postives = 70/104 (67.31%), Query Frame = 2 Query: 353 DRQRALDAAMNDINSSFGKESVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 ++ +AL AA++ I FGK S+ R G ++ +G L LD+ALG GGLP+GR++E++GPESSGKTTL L IAE+QKLGG VDAEHA D Y+ L Sbjct: 12 EKAKALAAALSQIEKQFGKGSIMRYGDNEVEHDIQVVSTGSLGLDIALGVGGLPRGRVIEVYGPESSGKTTLTLQVIAEMQKLGGTCAFVDAEHALDVQYASKL 115 HSP 2 Score: 38.1206 bits (87), Expect = 2.931e-26 Identity = 16/33 (48.48%), Postives = 24/33 (72.73%), Query Frame = 3 Query: 660 GVDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 GV++ +L++ D GE ALEI D + RSG++DL Sbjct: 116 GVNLTDLLISQPDTGEQALEITDALVRSGSVDL 148
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_BORPD (Protein recA OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=recA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.963e-26 Identity = 53/104 (50.96%), Postives = 70/104 (67.31%), Query Frame = 2 Query: 353 DRQRALDAAMNDINSSFGKESVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 ++ +AL AA++ I FGK S+ R G ++ +G L LD+ALG GGLP+GR++EI+GPESSGKTTL L IAE+QK+GG VDAEHA D Y+ L Sbjct: 12 EKAKALAAALSQIEKQFGKGSIMRYGDNEVEHDIQVVSTGSLGLDIALGVGGLPRGRVIEIYGPESSGKTTLTLQVIAEMQKIGGTCAFVDAEHALDVQYAAKL 115 HSP 2 Score: 38.1206 bits (87), Expect = 4.963e-26 Identity = 16/33 (48.48%), Postives = 24/33 (72.73%), Query Frame = 3 Query: 660 GVDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 GV++ +L++ D GE ALEI D + RSG++DL Sbjct: 116 GVNLTDLLISQPDTGEQALEITDALVRSGSVDL 148
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_BORA1 (Protein recA OS=Bordetella avium (strain 197N) GN=recA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 4.965e-26 Identity = 54/104 (51.92%), Postives = 70/104 (67.31%), Query Frame = 2 Query: 353 DRQRALDAAMNDINSSFGKESVTRLGSAGGAL-VETFPSGCLTLDLALG-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 ++ +AL AA++ I FGK S+ R G ++ +G L LD+ALG GGLP+GR+VEI+GPESSGKTTL L IAE+QK+GG VDAEHA D Y+ L Sbjct: 11 EKAKALAAALSQIEKQFGKGSIMRYGDNEVEHDIQVVSTGSLGLDIALGVGGLPRGRVVEIYGPESSGKTTLTLQVIAEMQKVGGTCAFVDAEHALDVQYASKL 114 HSP 2 Score: 37.7354 bits (86), Expect = 4.965e-26 Identity = 16/33 (48.48%), Postives = 24/33 (72.73%), Query Frame = 3 Query: 660 GVDVENLIVRXXDNGEMALEIADRMCRSGAIDL 758 GV++ +L++ D GE ALEI D + RSG++DL Sbjct: 115 GVNLGDLLISQPDTGEQALEITDALVRSGSVDL 147
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_LEGPL (Protein recA OS=Legionella pneumophila (strain Lens) GN=recA PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.121e-25 Identity = 62/104 (59.62%), Postives = 76/104 (73.08%), Query Frame = 2 Query: 353 DRQRALDAAMNDINSSFGKESVTRLG-SAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 ++Q+AL AA++ I FGK SV R+G S +E +G L LD+ALG GGLPKGRIVEI+GPESSGKTTL L IAE QK+GG A +DAEHA DPSY++ L Sbjct: 4 NKQKALSAALSQIERQFGKGSVMRMGDSTVSRDIEAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLQVIAECQKMGGTAAFIDAEHALDPSYAQKL 107
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_LEGPH (Protein recA OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=recA PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.121e-25 Identity = 62/104 (59.62%), Postives = 76/104 (73.08%), Query Frame = 2 Query: 353 DRQRALDAAMNDINSSFGKESVTRLG-SAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 ++Q+AL AA++ I FGK SV R+G S +E +G L LD+ALG GGLPKGRIVEI+GPESSGKTTL L IAE QK+GG A +DAEHA DPSY++ L Sbjct: 4 NKQKALSAALSQIERQFGKGSVMRMGDSTVSRDIEAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLQVIAECQKMGGTAAFIDAEHALDPSYAQKL 107
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_LEGPC (Protein recA OS=Legionella pneumophila (strain Corby) GN=recA PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.121e-25 Identity = 62/104 (59.62%), Postives = 76/104 (73.08%), Query Frame = 2 Query: 353 DRQRALDAAMNDINSSFGKESVTRLG-SAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 ++Q+AL AA++ I FGK SV R+G S +E +G L LD+ALG GGLPKGRIVEI+GPESSGKTTL L IAE QK+GG A +DAEHA DPSY++ L Sbjct: 4 NKQKALSAALSQIERQFGKGSVMRMGDSTVSRDIEAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLQVIAECQKMGGTAAFIDAEHALDPSYAQKL 107
BLAST of DR403425 vs. ExPASy Swiss-Prot
Match: RECA_LEGPA (Protein recA OS=Legionella pneumophila (strain Paris) GN=recA PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.121e-25 Identity = 62/104 (59.62%), Postives = 76/104 (73.08%), Query Frame = 2 Query: 353 DRQRALDAAMNDINSSFGKESVTRLG-SAGGALVETFPSGCLTLDLALG-GGLPKGRIVEIFGPESSGKTTLALHAIAEVQKLGGNAMLVDAEHAFDPSYSKAL 658 ++Q+AL AA++ I FGK SV R+G S +E +G L LD+ALG GGLPKGRIVEI+GPESSGKTTL L IAE QK+GG A +DAEHA DPSY++ L Sbjct: 4 NKQKALSAALSQIERQFGKGSVMRMGDSTVSRDIEAISTGSLGLDIALGIGGLPKGRIVEIYGPESSGKTTLTLQVIAECQKMGGTAAFIDAEHALDPSYAQKL 107 The following BLAST results are available for this feature:
BLAST of DR403425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >DR403425 ID=DR403425; Name=DR403425; organism=Citrus sinensis; type=EST; length=786bpback to top |