DR403418
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR403418 vs. ExPASy Swiss-Prot
Match: PSB5_DICDI (Proteasome subunit beta type-5 OS=Dictyostelium discoideum GN=psmB5 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.598e-12 Identity = 50/166 (30.12%), Postives = 82/166 (49.40%), Query Frame = 2 Query: 134 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAAD----SQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAV 616 GTT + Y GG+++ DS+++ G YVA+R+ K+ ++T + +G AAD + + R + ++ + A K+ AN+V Y+ K + L G ++ GWDK G ++Y V GT + Y YG D +K M EEA +L +AV Sbjct: 62 GTTTLAFVYGGGIIVSVDSKSTQGPYVASRSVKKVIEITPTLLGTMAGGAADCSFWERELGRRCRLYELRNKELISVAAASKILANIV----YSYKGYGLSMGTMITGWDK-TGPQLYYVDNDGTRLHGQRFSCGSGSTYAYGVLDTGFKWDMNDEEAYELGRRAV 222
BLAST of DR403418 vs. ExPASy Swiss-Prot
Match: PSMB_METTH (Proteasome subunit beta OS=Methanobacterium thermoautotrophicum GN=psmB PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.726e-12 Identity = 42/164 (25.61%), Postives = 88/164 (53.66%), Query Frame = 2 Query: 134 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF---LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAV 616 GTT +G+T GVV + R S G +A++A+DKI ++ +++ +GS AD+Q++ Y++ + ++ + +++ AA L + ++++ + +QT ++GG D+ G KIY + G +I F YG + + + + +EA + ++A+ Sbjct: 9 GTTTVGITCKDGVVFATERRASMGNLIAHKATDKIFKIDEHIAATIAGSVADAQSLMKYLKAEAALYRMRNSEKISIEAAAALAANILHSSRFYPFIVQT--LLGGVDE-NGAKIYSLDPSGGMIPDKFVSTGSGSPVAYGVLEDRYSDELYVDEAVDVAIRAI 169
BLAST of DR403418 vs. ExPASy Swiss-Prot
Match: PSB5_SPIOL (Proteasome subunit beta type-5 OS=Spinacia oleracea PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.726e-12 Identity = 47/162 (29.01%), Postives = 78/162 (48.15%), Query Frame = 2 Query: 134 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAV 616 GTT + + GV++ ADSR S G Y+++++ KI ++ + +G AAD Q + H + + +V A+ L+ + YN + L G ++ GWD+ G Y GG + F++ Y YG D +K MT EEA +L +A+ Sbjct: 55 GTTTLAFIFKHGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYNYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGMRFSV-GSGSPYAYGVLDNGYKYDMTVEEASELARRAI 215
BLAST of DR403418 vs. ExPASy Swiss-Prot
Match: PSB7_YEAST (Proteasome component PUP1 OS=Saccharomyces cerevisiae GN=PUP1 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.560e-12 Identity = 41/163 (25.15%), Postives = 82/163 (50.31%), Query Frame = 2 Query: 128 SMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAV 616 S GTTI+GV +N GVV+ AD+R++ G VA++ K+ +++ ++ +G+AAD++ V+ + + H++ + V A +++ + + + +IV G D G ++ + G+ + + WK+ +TKEEA +L A+ Sbjct: 27 STGTTIVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHRISPKIWCAGAGTAADTEAVTQLIGSNIELHSLYTSREPRVVSALQMLKQHLFKYQGHIGAYLIVAGVDP-TGSHLFSIHAHGSTDVGYYLSLGSGSLAAMAVLESHWKQDLTKEEAIKLASDAI 188
BLAST of DR403418 vs. ExPASy Swiss-Prot
Match: PSMB_METJA (Proteasome subunit beta OS=Methanocaldococcus jannaschii GN=psmB PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.073e-12 Identity = 43/163 (26.38%), Postives = 82/163 (50.31%), Query Frame = 2 Query: 134 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGV-PLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAV 616 GTT +G+ + V+L D R S G VA++ + K+ ++ D + + +GS D+Q + + + ++ G+ A L+ + ++++ F T +I+GG+D EG K++ + PLGG E+ F YG + + M+ EE +L + A+ Sbjct: 6 GTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLLIAEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLLEGAKLFSLDPLGGMNEEKTFTATGSGSPIAYGVLEAGYDRDMSVEEGIKLALNAL 168
BLAST of DR403418 vs. ExPASy Swiss-Prot
Match: PSB8_CANFA (Proteasome subunit beta type-8 OS=Canis familiaris GN=PSMB8 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.014e-11 Identity = 42/163 (25.77%), Postives = 79/163 (48.47%), Query Frame = 2 Query: 134 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVS 619 GTT + + GV++ DSR + G Y+++ +K+ ++ ++ SG AAD Q + + ++ G+ +V A+ L+ + Y + L G ++ GWDK +G +Y V GT + Y YG D ++ ++ EEA +L +A++ Sbjct: 72 GTTTLAFKFQHGVIVAVDSRATAGNYISSSRVNKVIEINPSLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMVYQYRGMDLSMGSMICGWDK-KGPGLYYVDQNGTRLSGNMFSTGSGSTYAYGVMDSGYQPSLSPEEAYELGRRAIT 233
BLAST of DR403418 vs. ExPASy Swiss-Prot
Match: PSB8_RAT (Proteasome subunit beta type-8 OS=Rattus norvegicus GN=Psmb8 PE=1 SV=3) HSP 1 Score: 67.781 bits (164), Expect = 5.141e-11 Identity = 45/163 (27.61%), Postives = 76/163 (46.63%), Query Frame = 2 Query: 134 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLV--RLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAV 616 GTT + + GV++ DSR S G Y+A +K+ ++ + SG AAD Q + + ++ G+ +V A+ L+ +L Y L G ++ GWDK +G +Y V GT + Y YG D +++ ++ EEA L +A+ Sbjct: 72 GTTTLAFKFQHGVIVAVDSRASAGSYIATIRVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLSNMMLQYRGMG-LSMGSMICGWDK-KGPGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGYRQDLSPEEAYDLARRAI 232
BLAST of DR403418 vs. ExPASy Swiss-Prot
Match: PSB7_SCHPO (Probable proteasome subunit beta type-7 OS=Schizosaccharomyces pombe GN=SPAC23D3.07 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 5.141e-11 Identity = 40/183 (21.86%), Postives = 92/183 (50.27%), Query Frame = 2 Query: 74 ECFRGKMDLKMEDFNAPH--SMGTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAV 616 E ++ + L+ + F P S GTTI+GV +VLGAD+R + G +A++ K+ ++ N++ +G+AAD++ V+ + + H++ + V A +++ + + + +++GG+D +G ++ + G+ + P+ + ++ + + EA +LV +A+ Sbjct: 13 EYYQRNLLLQEKGFPTPKATSTGTTIVGVIAKDCIVLGADTRATAGPIIADKNCKKLHLISPNIWCAGAGTAADTEFVTSMISSNIELHSLYTNRKPRVVTALTMLKQHLFRYQGHIGAYLVLGGYD-CKGPHLFTIAAHGSSDKLPYVALGSGSLAAISVLETKYQPDLERHEAMELVKEAI 194
BLAST of DR403418 vs. ExPASy Swiss-Prot
Match: PSMB_PYRFU (Proteasome subunit beta OS=Pyrococcus furiosus GN=psmB PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.715e-11 Identity = 43/164 (26.22%), Postives = 82/164 (50.00%), Query Frame = 2 Query: 134 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNFLQTG-MIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAVSL 622 GTT +G+ GVVL AD+R S G + + KI ++ +++ + +G D + ++ + + +G+ +VK A L+ + +K F G +VGG+D E +++ V + G I E +A + Y D ++E M+ + +L VKA+++ Sbjct: 10 GTTTVGLVCKEGVVLAADTRASLGNIIYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLLKAEANLYKSTVGKEMSVKALATLLANILNGSKYFPYLGWFLVGGYD--EKPRLFSVDMVGGITEDNYAAAGSGMEFAYSILDSEYREEMSVNDGIKLAVKAINV 171
BLAST of DR403418 vs. ExPASy Swiss-Prot
Match: PSB5B_ARATH (Proteasome subunit beta type-5-B OS=Arabidopsis thaliana GN=PBE2 PE=1 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 8.770e-11 Identity = 44/162 (27.16%), Postives = 78/162 (48.15%), Query Frame = 2 Query: 134 GTTIIGVTYNGGVVLGADSRTSTGVYVANRASDKITQLTDNVYLCRSGSAADSQTVSDYVRYFLHQHTIQLGQPATVKVAANLVRLLSYNNKNF-LQTGMIVGGWDKYEGGKIYGVPLGGTIIEQPFAIXXXXXXYLYGFFDQAWKEGMTKEEAEQLVVKAV 616 GTT + + GV++ ADSR S G Y+++++ KI ++ + +G AAD Q + H + + +V A+ L+ + Y+ + L G ++ GWD+ G Y GG + F++ Y YG D +K M+ EEA +L +++ Sbjct: 57 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETGPGLYYVDNEGGRLKGDRFSV-GSGSPYAYGVLDSGYKFDMSVEEASELARRSI 217 The following BLAST results are available for this feature:
BLAST of DR403418 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 50
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403418 ID=DR403418; Name=DR403418; organism=Citrus sinensis; type=EST; length=624bpback to top |