DR403414
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR403414 vs. ExPASy Swiss-Prot
Match: SPB4_COCIM (ATP-dependent rRNA helicase SPB4 OS=Coccidioides immitis GN=SPB4 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.004e-14 Identity = 40/72 (55.56%), Postives = 51/72 (70.83%), Query Frame = -1 Query: 53 LKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQV 268 L P LSE +L+A+A GF TPVQA+TIPL +KDV V+A TGSGKT+AF++P+VE L R + K H V Sbjct: 20 LTPPLSEWILDAVAAMGFTRMTPVQASTIPLFMGHKDVVVEAVTGSGKTMAFLIPVVEKLLRLEAPIKKHHV 91
BLAST of DR403414 vs. ExPASy Swiss-Prot
Match: SPB4_BOTFB (ATP-dependent rRNA helicase spb4 OS=Botryotinia fuckeliana (strain B05.10) GN=spb4 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.004e-14 Identity = 40/72 (55.56%), Postives = 51/72 (70.83%), Query Frame = -1 Query: 53 LKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQV 268 L P+L+E VL+A++ GFE TPVQA+TIPL KDV V+A TGSGKTL+F++P+VE L R K H V Sbjct: 17 LTPSLAEWVLDAISSMGFEKMTPVQASTIPLFMGNKDVVVEAVTGSGKTLSFLIPVVEKLLRLEEPLKKHHV 88
BLAST of DR403414 vs. ExPASy Swiss-Prot
Match: SPB4_ASPFU (ATP-dependent rRNA helicase spb4 OS=Aspergillus fumigatus GN=spb4 PE=3 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 2.004e-14 Identity = 42/88 (47.73%), Postives = 55/88 (62.50%), Query Frame = -1 Query: 53 MESNPNRALTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQV 316 M P + + + PALSE VLEA++ GF TPVQA+ IPL ++KDV V+A TGSGKTL+F++P+VE L R K H V Sbjct: 1 MAPKPPSGTSLRAWDAVTPALSEWVLEAMSSMGFTRMTPVQASAIPLFMAHKDVVVEAVTGSGKTLSFLIPVVEKLLRLEEPIKKHHV 88
BLAST of DR403414 vs. ExPASy Swiss-Prot
Match: DDX55_MOUSE (ATP-dependent RNA helicase DDX55 OS=Mus musculus GN=Ddx55 PE=2 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 2.004e-14 Identity = 43/80 (53.75%), Postives = 52/80 (65.00%), Query Frame = -1 Query: 53 LTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQV 292 +TE + L+ L VL AL E GF TPVQ+ATIPL KDVA +A TGSGKTLAFV+P++EIL R K +QV Sbjct: 4 VTEGAWESLQVPLHPRVLGALRELGFPHMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPILEILLRREEKLKKNQV 83
BLAST of DR403414 vs. ExPASy Swiss-Prot
Match: DDX55_HUMAN (ATP-dependent RNA helicase DDX55 OS=Homo sapiens GN=DDX55 PE=1 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 2.004e-14 Identity = 43/80 (53.75%), Postives = 51/80 (63.75%), Query Frame = -1 Query: 53 LTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQV 292 +TE + L L VL AL E GF + TPVQ+ATIPL KDVA +A TGSGKTLAFV+P++EIL R K QV Sbjct: 4 VTEGSWESLPVPLHPQVLGALRELGFPYMTPVQSATIPLFMRNKDVAAEAVTGSGKTLAFVIPILEILLRREEKLKKSQV 83
BLAST of DR403414 vs. ExPASy Swiss-Prot
Match: SPB4_ASPTN (ATP-dependent rRNA helicase spb4 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=spb4 PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 2.617e-14 Identity = 41/88 (46.59%), Postives = 55/88 (62.50%), Query Frame = -1 Query: 53 MESNPNRALTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQV 316 M P + + + P+LSE VL+A+A GF TPVQA+ IPL ++KDV V+A TGSGKTL+F+VP+VE L R K H + Sbjct: 1 MAPKPPAGTSSRAWEAVSPSLSEWVLDAVASWGFSKMTPVQASAIPLFMAHKDVVVEAVTGSGKTLSFLVPVVEKLLRLEEPIKKHHI 88
BLAST of DR403414 vs. ExPASy Swiss-Prot
Match: SPB4_SCLS1 (ATP-dependent rRNA helicase spb4 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=spb4 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.830e-14 Identity = 39/72 (54.17%), Postives = 50/72 (69.44%), Query Frame = -1 Query: 53 LKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQV 268 L P+L+E +L+A+ GFE TPVQA+TIPL KDV V+A TGSGKTL+F++P+VE L R K H V Sbjct: 17 LTPSLAEWILDAIKSMGFEKMTPVQASTIPLFMGNKDVVVEAVTGSGKTLSFLIPVVEKLLRLEEPIKKHHV 88
BLAST of DR403414 vs. ExPASy Swiss-Prot
Match: SPB4_GIBZE (ATP-dependent rRNA helicase SPB4 OS=Gibberella zeae GN=SPB4 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 5.830e-14 Identity = 41/75 (54.67%), Postives = 50/75 (66.67%), Query Frame = -1 Query: 44 LKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQVQNI 268 L P LSE + +A+A GF+ TPVQAAT+P KDV V+A TGSGKTLAF++PLV+ L R S K H V I Sbjct: 17 LNPPLSEWIRDAVATMGFDQMTPVQAATLPHFMGNKDVVVEAVTGSGKTLAFLIPLVQKLLRLSEPTKKHHVAAI 91
BLAST of DR403414 vs. ExPASy Swiss-Prot
Match: SPB4_EMENI (ATP-dependent rRNA helicase spb4 OS=Emericella nidulans GN=spb4 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 7.614e-14 Identity = 40/88 (45.45%), Postives = 54/88 (61.36%), Query Frame = -1 Query: 53 MESNPNRALTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQV 316 M P + + + P LSE VL+A++ GF TPVQA+ IPL ++KDV V+A TGSGKTL+F++P+VE L R K H V Sbjct: 1 MAPKPPSGTSSRAWDAVNPPLSEWVLDAVSSMGFTRMTPVQASAIPLFMAHKDVVVEAVTGSGKTLSFLIPVVEKLLRLEEPIKKHHV 88
BLAST of DR403414 vs. ExPASy Swiss-Prot
Match: DDX55_BOVIN (ATP-dependent RNA helicase DDX55 OS=Bos taurus GN=DDX55 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 7.614e-14 Identity = 42/80 (52.50%), Postives = 49/80 (61.25%), Query Frame = -1 Query: 53 LTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQV 292 +TE + L L VL L E GF + TPVQ+ATIPL KDVA +A TGSGKTLAFV+P+ EIL R K QV Sbjct: 4 VTEGSWESLPVPLHPKVLSVLRELGFPYMTPVQSATIPLFMKNKDVAAEAVTGSGKTLAFVIPIEEILLRREEKFKKSQV 83 The following BLAST results are available for this feature:
BLAST of DR403414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403414 ID=DR403414; Name=DR403414; organism=Citrus sinensis; type=EST; length=589bpback to top |