DR403414
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR403414 vs. ExPASy Swiss-Prot
Match: DDX55_DANRE (ATP-dependent RNA helicase DDX55 OS=Danio rerio GN=ddx55 PE=2 SV=2) HSP 1 Score: 76.6406 bits (187), Expect = 9.944e-14 Identity = 39/80 (48.75%), Postives = 52/80 (65.00%), Query Frame = -1 Query: 53 LTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQV 292 +T+ ++ L L + +L+ L E GF + TPVQ+A IPL S KDVA +A TGSGKTLAFV+P +EIL + K QV Sbjct: 4 ITDGKWGSLPVKLHDNILQTLKELGFTYMTPVQSACIPLFMSNKDVAAEAVTGSGKTLAFVIPALEILLKREEKLKKMQV 83
BLAST of DR403414 vs. ExPASy Swiss-Prot
Match: SPB4_USTMA (ATP-dependent rRNA helicase SPB4 OS=Ustilago maydis GN=SPB4 PE=3 SV=2) HSP 1 Score: 75.485 bits (184), Expect = 2.215e-13 Identity = 38/75 (50.67%), Postives = 54/75 (72.00%), Query Frame = -1 Query: 53 FSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQV 277 ++ L P L+ V+ L++ GF TPVQA+TIPL S+KDV V+A TGSGKTLAFV+P++E+L R ++ K +V Sbjct: 28 WTKLTPPLTPWVVSLLSDLGFGQMTPVQASTIPLFVSHKDVVVEAVTGSGKTLAFVIPVLEMLARRTTRLKKDEV 102
BLAST of DR403414 vs. ExPASy Swiss-Prot
Match: SPB4_PHANO (ATP-dependent rRNA helicase SPB4 OS=Phaeosphaeria nodorum GN=SPB4 PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 2.893e-13 Identity = 39/75 (52.00%), Postives = 49/75 (65.33%), Query Frame = -1 Query: 53 FSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQV 277 FS L PALSE +++A+ GF TPVQ A IP+ DV V+A TGSGKTLAF++P+VE L R + K H V Sbjct: 11 FSALTPALSEWIIDAVDAMGFVKTTPVQHAAIPMFMKNSDVVVEAVTGSGKTLAFLIPIVERLLREDAPTKKHHV 85
BLAST of DR403414 vs. ExPASy Swiss-Prot
Match: DDX55_DROME (Probable ATP-dependent RNA helicase DDX55 homolog OS=Drosophila melanogaster GN=CG9630 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 3.779e-13 Identity = 38/71 (53.52%), Postives = 53/71 (74.65%), Query Frame = -1 Query: 83 LTETRFSDL-KPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRR 292 ++ ++S L KP LS+ VL+ + GF+ TPVQ A IPLL + KDV+ +A TGSGKTLAF+VP++EIL+R Sbjct: 1 MSRKKWSSLDKPPLSDAVLQVVQSFGFQQMTPVQTAAIPLLLARKDVSAEAVTGSGKTLAFLVPMLEILQR 71
BLAST of DR403414 vs. ExPASy Swiss-Prot
Match: RHLB_IDILO (ATP-dependent RNA helicase rhlB OS=Idiomarina loihiensis GN=rhlB PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.875e-12 Identity = 37/76 (48.68%), Postives = 53/76 (69.74%), Query Frame = -1 Query: 65 LTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARK 292 LTETRF+DL AL + +A++ AGFE+CTP+QA ++P+ S +DVA A TG+GKTLAF++ L + S+ K Sbjct: 6 LTETRFADL--ALHPKIQQAISSAGFEYCTPIQALSLPVALSNRDVAGQAQTGTGKTLAFLLATFNRLMQNESSEK 79
BLAST of DR403414 vs. ExPASy Swiss-Prot
Match: DDX55_XENLA (ATP-dependent RNA helicase DDX55 OS=Xenopus laevis GN=ddx55 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.449e-12 Identity = 38/80 (47.50%), Postives = 50/80 (62.50%), Query Frame = -1 Query: 53 LTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQV 292 +TE + L L+ + L E F TPVQ+ATIPL + KD+A +A TGSGKTLAFV+PL+EIL + K +QV Sbjct: 4 VTEGTWDSLPQKLNGSIRRTLEELKFTHMTPVQSATIPLFMNNKDIAAEAITGSGKTLAFVIPLLEILLKREEKLKKNQV 83
BLAST of DR403414 vs. ExPASy Swiss-Prot
Match: SPB4_CHAGB (ATP-dependent rRNA helicase SPB4 OS=Chaetomium globosum GN=SPB4 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.708e-11 Identity = 37/82 (45.12%), Postives = 50/82 (60.98%), Query Frame = -1 Query: 44 TETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVEILRRASSARKPHQVQNI 289 T + L P+L+ +L+ L+ GFE TPVQ + + KDV V+A TGSGKTLAF++P+VE L R+ K H VQ I Sbjct: 11 TPRSWGALTPSLAPWILDYLSSMGFEQPTPVQKSCFDIFRGNKDVVVEAVTGSGKTLAFLIPVVERLLRSEDPAKRHHVQAI 92
BLAST of DR403414 vs. ExPASy Swiss-Prot
Match: DDX55_DICDI (Probable ATP-dependent RNA helicase ddx55 OS=Dictyostelium discoideum GN=ddx55 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.708e-11 Identity = 35/72 (48.61%), Postives = 51/72 (70.83%), Query Frame = -1 Query: 65 FSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVE-ILRRASSARK 277 ++ L+ LS+ L + GF+ +PVQ+A IPL S KDV V+A TGSGKTLAFV+P++E IL+R ++ +K Sbjct: 10 WNKLENKLSDSTLNTINRLGFKSMSPVQSAVIPLFMSNKDVLVEACTGSGKTLAFVIPIIEKILKRETNLKK 81
BLAST of DR403414 vs. ExPASy Swiss-Prot
Match: RHLB_VIBVY (ATP-dependent RNA helicase rhlB OS=Vibrio vulnificus (strain YJ016) GN=rhlB PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.033e-11 Identity = 37/85 (43.53%), Postives = 53/85 (62.35%), Query Frame = -1 Query: 44 LTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVVPLVE--ILRRASSARKPHQVQNI 292 +TE +F+DL L+ V+E L + GFEFCTP+QA +P+L S +D+A A TG+GKTLAF+ + A R+P Q + I Sbjct: 6 ITEQKFADL--GLNPQVVEGLEKKGFEFCTPIQALALPVLLSGQDIAGQAQTGTGKTLAFLTATFNHLLTTHAHEGRQPTQPRAI 88
BLAST of DR403414 vs. ExPASy Swiss-Prot
Match: RHLB_SHELP (ATP-dependent RNA helicase rhlB OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=rhlB PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.033e-11 Identity = 31/62 (50.00%), Postives = 46/62 (74.19%), Query Frame = -1 Query: 107 LTETRFSDLKPALSEPVLEALAEAGFEFCTPVQAATIPLLCSYKDVAVDAATGSGKTLAFVV 292 LT +F+D +L + +AL E+GFE+CTP+QA ++P+L +KD+A A TG+GKTLAF+V Sbjct: 6 LTNQKFADF--SLHPEIQQALVESGFEYCTPIQALSLPILLEHKDIAGQAQTGTGKTLAFLV 65 The following BLAST results are available for this feature:
BLAST of DR403414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DR403414 ID=DR403414; Name=DR403414; organism=Citrus sinensis; type=EST; length=589bpback to top |