DR403404

Overview
NameDR403404
Unique NameDR403404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length624
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK4_BRAJU (S-adenosylmethionine synthetase 4 OS=Brassica juncea GN=MSAMS4 PE=2 SV=1)

HSP 1 Score: 342.043 bits (876), Expect = 1.412e-93
Identity = 172/207 (83.09%), Postives = 181/207 (87.44%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPLT VLATKLGA+LTEVRKNKTCPWLRPDGKTQVTVEY+NEGGAM+P RVHTVLISTQHDETVT ++I+ DLKEHVIKPVIPA +LDE TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KD TKVDRS AYIVRQAAKSVVA+GLARRC+VQVSYAIGVPEPLSVFVDTY TG I DKDIL LIKE F
Sbjct:  135 PELMPLTHVLATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYKNEGGAMIPIRVHTVLISTQHDETVTNDEIAVDLKEHVIKPVIPAKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVATGLARRCIVQVSYAIGVPEPLSVFVDTYKTGTIPDKDILVLIKEAF 341          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK1_PETHY (S-adenosylmethionine synthetase 1 OS=Petunia hybrida GN=SAM1 PE=2 SV=1)

HSP 1 Score: 341.273 bits (874), Expect = 2.409e-93
Identity = 170/207 (82.13%), Postives = 180/207 (86.96%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPLT V ATKLGA+LTEVRKNKTCPWLRPDGKTQVTVEYRN+ GAM+P RVHT+LISTQHDETVT +QI++DLKEHVIKPV+PA +LDE TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KD TKVDRS AYIVRQAAKSVVASGLARRC+VQVSYAIGV EPLSVFVDTY TG I DKDIL LIKENF
Sbjct:  135 PELMPLTHVWATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYRNDNGAMIPLRVHTILISTQHDETVTNDQIAQDLKEHVIKPVVPAEYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILTLIKENF 341          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK2_PETHY (S-adenosylmethionine synthetase 2 OS=Petunia hybrida GN=SAM2 PE=2 SV=1)

HSP 1 Score: 340.502 bits (872), Expect = 4.109e-93
Identity = 169/207 (81.64%), Postives = 180/207 (86.96%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPLT VLATKLGA+LTEVRKNKTCPWLRPDGKTQVTVEYRN+ GAM+P RVHT+LISTQHDETVT +QI++DLKEHVIKPV+PA +LDE TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KD TKVDRS AYIVRQAAKSVVASGLARRC+VQVSYAIGV EPLSVFVDTY TG I  KD+L LIKENF
Sbjct:  135 PELMPLTHVLATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYRNDNGAMIPLRVHTILISTQHDETVTNDQIAQDLKEHVIKPVVPAEYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPGKDVLTLIKENF 341          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK3_ARATH (S-adenosylmethionine synthetase 3 OS=Arabidopsis thaliana GN=METK3 PE=1 SV=1)

HSP 1 Score: 340.117 bits (871), Expect = 5.367e-93
Identity = 170/207 (82.13%), Postives = 181/207 (87.44%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPLT VLATKLGA+LTEVRKNKTCPWLRPDGKTQVTVEY+N+GGAM+P RVHTVLISTQHDETVT ++I+ DLKEHVIKPVIPA +LD+ TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KD TKVDRS AYIVRQAAKSVVA+GLARRC+VQVSYAIGVPEPLSVFVDTY TG I DKDIL LIKE F
Sbjct:  135 PELMPLTHVLATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYKNDGGAMIPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPAKYLDDNTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVAAGLARRCIVQVSYAIGVPEPLSVFVDTYKTGTIPDKDILVLIKEAF 341          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK2_TOBAC (S-adenosylmethionine synthetase 2 OS=Nicotiana tabacum GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 340.117 bits (871), Expect = 5.367e-93
Identity = 172/207 (83.09%), Postives = 181/207 (87.44%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPLT VLAT+LGA+LTEVRKNKTCPWLRPDGKTQVTVEY+N+ GAMVP RVHTVLISTQHDE VT EQI++DLKEHVIKPVIPA +LDE TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KD TKVDRS AYIVRQAAKSVVA+GLARRC+VQVSYAIGV EPLSVFVDTY TG I DKDILALIKENF
Sbjct:  135 PELMPLTHVLATQLGAKLTEVRKNKTCPWLRPDGKTQVTVEYKNDNGAMVPIRVHTVLISTQHDEGVTNEQIAQDLKEHVIKPVIPAKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGEGAFSGKDPTKVDRSGAYIVRQAAKSVVAAGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILALIKENF 341          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK1_TOBAC (S-adenosylmethionine synthetase 1 OS=Nicotiana tabacum GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 339.732 bits (870), Expect = 7.010e-93
Identity = 171/207 (82.61%), Postives = 180/207 (86.96%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPLT V ATKLGA+LTEVRKNKTCPWLRPDGKTQVTVEY+N+ GAMVP RVHTVLISTQHDETVT +QI++DLKEHVIKPVIP+ +LDE TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KD TKVDRS AYIVRQAAKSVVASGLARRC+VQVSYAIGV EPLSVFVDTY TG I DKDIL LIKENF
Sbjct:  135 PELMPLTHVWATKLGAKLTEVRKNKTCPWLRPDGKTQVTVEYKNDNGAMVPIRVHTVLISTQHDETVTNDQIAQDLKEHVIKPVIPSQYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVASGLARRCIVQVSYAIGVAEPLSVFVDTYKTGTIPDKDILTLIKENF 341          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK1_CATRO (S-adenosylmethionine synthetase 1 OS=Catharanthus roseus GN=SAMS1 PE=1 SV=1)

HSP 1 Score: 339.732 bits (870), Expect = 7.010e-93
Identity = 169/207 (81.64%), Postives = 180/207 (86.96%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PE MPL+ VLATKLGARLTEVRKN TCPWLRPDGKTQVTVEY NE GAMVP RVHTV+ISTQHDETVT +QI+ DLKEHVIKPVIP  +LDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KD TKVDRS AYIVRQAAKS+VA+GLARRC+VQVSYAIGVPEPLSVFVDTYGTGKI DK+IL ++KENF
Sbjct:  135 PEFMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNENGAMVPVRVHTVVISTQHDETVTNDQIAADLKEHVIKPVIPEKYLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENF 341          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK2_CATRO (S-adenosylmethionine synthetase 2 OS=Catharanthus roseus GN=SAMS2 PE=1 SV=1)

HSP 1 Score: 339.347 bits (869), Expect = 9.155e-93
Identity = 168/207 (81.16%), Postives = 181/207 (87.44%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPL+ VLATKLGARLTEVRKN TCPWLRPDGKTQVTVEY N+ GAMVP RVHTVLISTQHDETVT ++I+ DLKEHVIKPV+P  +LDE+TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KD TKVDRS AYIVRQAAKS+VASGLARRC+VQVSYAIGVPEPLSVFVDTYGTGKI DK+IL ++KENF
Sbjct:  135 PELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYYNDNGAMVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVVPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENF 341          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK1_PICSI (S-adenosylmethionine synthetase 1 OS=Picea sitchensis GN=METK1 PE=2 SV=1)

HSP 1 Score: 338.961 bits (868), Expect = 1.196e-92
Identity = 172/209 (82.30%), Postives = 182/209 (87.08%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTY--GTGKISDKDILALIKENF 622
            PELMPLT VLATKLGARLTEVRK+ TCPWLRPDGKTQVTVEY+NEGGAMVP RVHTVLISTQHDETVT ++I+ DLKEHVIKPV+P+ +LDE TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KD TKVDRS AYIVRQAAKSVVA+GLARRCLVQVSYAIGVPEPLSVFVDTY  GTGKI D +IL LIKENF
Sbjct:  135 PELMPLTHVLATKLGARLTEVRKDGTCPWLRPDGKTQVTVEYKNEGGAMVPLRVHTVLISTQHDETVTNDEIAADLKEHVIKPVVPSQYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVAAGLARRCLVQVSYAIGVPEPLSVFVDTYGTGTGKIQDAEILKLIKENF 343          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK2_VITVI (S-adenosylmethionine synthetase 2 OS=Vitis vinifera GN=METK2 PE=3 SV=1)

HSP 1 Score: 338.191 bits (866), Expect = 2.039e-92
Identity = 167/207 (80.68%), Postives = 181/207 (87.44%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPL+ VLATKLGARLTEVRKN TCPWLRPDGKTQVTVEY N+GGA VP RVHTVLISTQHDETVT ++I+ DLKEHVIKPVIP  +LDE+TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY             KD TKVDRS AYIVRQAAKS+VA+GLARRC+VQVSYAIGVPEPLSVFVDTYGTGKI D++IL ++KENF
Sbjct:  135 PELMPLSHVLATKLGARLTEVRKNGTCPWLRPDGKTQVTVEYHNDGGARVPIRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDREILKIVKENF 341          
The following BLAST results are available for this feature:
BLAST of DR403404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK4_BRAJU1.412e-9383.09S-adenosylmethionine synthetase 4 OS=Brassica junc... [more]
METK1_PETHY2.409e-9382.13S-adenosylmethionine synthetase 1 OS=Petunia hybri... [more]
METK2_PETHY4.109e-9381.64S-adenosylmethionine synthetase 2 OS=Petunia hybri... [more]
METK3_ARATH5.367e-9382.13S-adenosylmethionine synthetase 3 OS=Arabidopsis t... [more]
METK2_TOBAC5.367e-9383.09S-adenosylmethionine synthetase 2 OS=Nicotiana tab... [more]
METK1_TOBAC7.010e-9382.61S-adenosylmethionine synthetase 1 OS=Nicotiana tab... [more]
METK1_CATRO7.010e-9381.64S-adenosylmethionine synthetase 1 OS=Catharanthus ... [more]
METK2_CATRO9.155e-9381.16S-adenosylmethionine synthetase 2 OS=Catharanthus ... [more]
METK1_PICSI1.196e-9282.30S-adenosylmethionine synthetase 1 OS=Picea sitchen... [more]
METK2_VITVI2.039e-9280.68S-adenosylmethionine synthetase 2 OS=Vitis vinifer... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244O13 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244O13 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403404 ID=DR403404; Name=DR403404; organism=Citrus sinensis; type=EST; length=624bp
ACCTGAGCTAATGCCGCTGACTCTCGTTCTTGCCACCAAGCTTGGAGCCA
GACTTACTGAGGTGAGAAAGAATAAGACATGCCCCTGGCTGAGGCCGGAT
GGAAAAACCCAGGTGACTGTTGAGTACCGGAACGAAGGTGGAGCCATGGT
CCCACAGAGGGTCCACACTGTTCTCATTTCAACCCAGCACGATGAAACTG
TCACCAAGGAGCAGATTTCTGAGGACCTGAAGGAGCATGTGATTAAACCA
GTCATTCCGGCACATTTCCTTGATGAAAGGACAATCTTCCACCTCAACCC
CTCTGGTCGTTTTGTCATTGGCGGGCCACATGGGGATGCAGGGCTTACCG
GTAGGAAGATCATCATTGATACTTATGGTGGTTGGGGTGCTCATGGTGGC
GGTGCCTTCTCTGGCAAGGATTCTACAAAGGTCGATCGAAGTGCTGCATA
TATTGTCAGGCAGGCTGCAAAGAGTGTGGTGGCTTCTGGGCTTGCCCGTC
GCTGTCTTGTCCAGGTCTCTTATGCCATTGGTGTGCCAGAACCGCTGTCT
GTGTTTGTGGACACTTATGGTACAGGAAAGATTTCAGATAAGGATATACT
GGCTCTAATTAAGGAGAACTTTGA
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