DR403404

Overview
NameDR403404
Unique NameDR403404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length624
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_BACAA (S-adenosylmethionine synthetase OS=Bacillus anthracis (strain A0248) GN=metK PE=3 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 3.751e-62
Identity = 122/206 (59.22%), Postives = 149/206 (72.33%), Query Frame = 2
Query:    5 ELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            ELMPL + LA KL  RLTEVRKN T  +LRPDGKTQVTVEY   G    P RV T++ISTQH   VT E+I  DLKEHVIK V+PA  +D  T F +NP+GRFVIGGP GDAGLTGRKII+DTY             KD+TKVDRSAAY  R  AK++VA+GLA +  VQ++YAIGV +P+S+ VDT+GTGK+S+  ++ L++ NF
Sbjct:  146 ELMPLPISLAHKLARRLTEVRKNDTLSYLRPDGKTQVTVEYDENGK---PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELIDGETKFFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSAAYAARYVAKNIVAAGLAEKAEVQLAYAIGVAQPVSISVDTFGTGKVSEDVLVELVRNNF 348          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_CARHZ (S-adenosylmethionine synthetase OS=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) GN=metK PE=3 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 6.399e-62
Identity = 117/207 (56.52%), Postives = 154/207 (74.40%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMP+ + LA +L  RL EVRK++  P+LRPDGKTQVTVEY  +     P RV T+++STQH   V++E+I +D+ EHV+KPVIP H LDE T + +NP+GRFVIGGP GDAGLTGRKII+DTY             KD TKVDRSAAY  R  AK++VA+G+A +  +Q++YAIGV +P+S+ VDT+GTGKI+D+ I+ LIK++F
Sbjct:  143 PELMPMPISLAHRLARRLAEVRKSRLLPYLRPDGKTQVTVEYDGDK----PVRVDTIVVSTQHHPDVSQEEIRKDIIEHVVKPVIPEHLLDENTRYFVNPTGRFVIGGPQGDAGLTGRKIIVDTYGGMARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGIADKIEIQLAYAIGVAKPVSIMVDTFGTGKIADEKIVELIKKHF 345          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_BACCR (S-adenosylmethionine synthetase OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=metK PE=3 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 1.426e-61
Identity = 121/206 (58.74%), Postives = 149/206 (72.33%), Query Frame = 2
Query:    5 ELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            ELMPL + LA KL  RLTEVRK+ T  +LRPDGKTQVTVEY   G    P RV T++ISTQH   VT E+I  DLKEHVIK V+PA  +D  T F +NP+GRFVIGGP GDAGLTGRKII+DTY             KD+TKVDRSAAY  R  AK++VA+GLA +  VQ++YAIGV +P+S+ VDT+GTGK+S+  ++ L++ NF
Sbjct:  146 ELMPLPISLAHKLARRLTEVRKDDTLSYLRPDGKTQVTVEYDENGK---PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELMDGETKFFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSAAYAARYVAKNIVAAGLAEKAEVQLAYAIGVAQPVSISVDTFGTGKVSEDVLVELVRNNF 348          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_BACC4 (S-adenosylmethionine synthetase OS=Bacillus cereus (strain B4264) GN=metK PE=3 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 1.426e-61
Identity = 121/206 (58.74%), Postives = 149/206 (72.33%), Query Frame = 2
Query:    5 ELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            ELMPL + LA KL  RLTEVRK+ T  +LRPDGKTQVTVEY   G    P RV T++ISTQH   VT E+I  DLKEHVIK V+PA  +D  T F +NP+GRFVIGGP GDAGLTGRKII+DTY             KD+TKVDRSAAY  R  AK++VA+GLA +  VQ++YAIGV +P+S+ VDT+GTGK+S+  ++ L++ NF
Sbjct:  146 ELMPLPISLAHKLARRLTEVRKDDTLSYLRPDGKTQVTVEYDENGK---PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELMDGETKFFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSAAYAARYVAKNIVAAGLAEKAEVQLAYAIGVAQPVSISVDTFGTGKVSEDVLVELVRNNF 348          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_BACC1 (S-adenosylmethionine synthetase OS=Bacillus cereus (strain ATCC 10987) GN=metK PE=3 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 1.426e-61
Identity = 121/206 (58.74%), Postives = 149/206 (72.33%), Query Frame = 2
Query:    5 ELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            ELMPL + LA KL  RLTEVRK+ T  +LRPDGKTQVTVEY   G    P RV T++ISTQH   VT E+I  DLKEHVIK V+PA  +D  T F +NP+GRFVIGGP GDAGLTGRKII+DTY             KD+TKVDRSAAY  R  AK++VA+GLA +  VQ++YAIGV +P+S+ VDT+GTGK+S+  ++ L++ NF
Sbjct:  146 ELMPLPISLAHKLARRLTEVRKDDTLSYLRPDGKTQVTVEYDENGK---PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELIDGETKFFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSAAYAARYVAKNIVAAGLAEKAEVQLAYAIGVAQPVSISVDTFGTGKVSEDVLVELVRNNF 348          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_GEOTN (S-adenosylmethionine synthetase OS=Geobacillus thermodenitrificans (strain NG80-2) GN=metK PE=3 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 1.862e-61
Identity = 115/206 (55.83%), Postives = 147/206 (71.36%), Query Frame = 2
Query:    5 ELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            ELMPL + LA +L  RL EVRK    P+LRPDGKTQVT+EY   G    P RV T++ISTQH   +  +QI  D+KEHVIKP++PA  LDE T + +NP+GRFVIGGP GDAGLTGRKII+DTY             KD TKVDRSAAY  R  AK++VA+GLA +C VQ++YAIGV  P+S+ +DT+GTGK+S+  ++ +++ NF
Sbjct:  146 ELMPLPISLAHRLSRRLAEVRKTDVLPYLRPDGKTQVTIEYDENGK---PVRVDTIVISTQHHPEIEHDQIERDMKEHVIKPIVPAELLDENTKYFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLADKCEVQLAYAIGVARPVSISIDTFGTGKVSEDVLIEVVRNNF 348          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_CLOPS (S-adenosylmethionine synthetase OS=Clostridium perfringens (strain SM101 / Type A) GN=metK PE=3 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 1.862e-61
Identity = 120/206 (58.25%), Postives = 150/206 (72.82%), Query Frame = 2
Query:    5 ELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            E MP  + +A +L  RLTEVRKN T P+LRPDGKTQVTVEY N+     P R+  ++ISTQH   V++EQI  DL EHVIK VIPA  LDE T +++NP+GRFVIGGP GDAGLTGRKII+DTY             KD TKVDRSAAY  R  AK++VA+G+A +  VQV+YAIGV +P+S+ VDT+GTGKISD++I+ +I + F
Sbjct:  141 EFMPAPIAMAHRLSRRLTEVRKNGTLPYLRPDGKTQVTVEYENDK----PVRIDAIVISTQHGPEVSQEQIQADLMEHVIKAVIPAELLDENTKYYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYGRHGGGAFSGKDPTKVDRSAAYAARWVAKNLVAAGIADKLEVQVAYAIGVAKPVSIIVDTFGTGKISDEEIVNIINKVF 342          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_CLOP1 (S-adenosylmethionine synthetase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=metK PE=3 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 1.862e-61
Identity = 120/206 (58.25%), Postives = 150/206 (72.82%), Query Frame = 2
Query:    5 ELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            E MP  + +A +L  RLTEVRKN T P+LRPDGKTQVTVEY N+     P R+  ++ISTQH   V++EQI  DL EHVIK VIPA  LDE T +++NP+GRFVIGGP GDAGLTGRKII+DTY             KD TKVDRSAAY  R  AK++VA+G+A +  VQV+YAIGV +P+S+ VDT+GTGKISD++I+ +I + F
Sbjct:  141 EFMPAPIAMAHRLSRRLTEVRKNGTLPYLRPDGKTQVTVEYENDK----PVRIDAIVISTQHGPEVSQEQIQADLMEHVIKAVIPAELLDENTKYYINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYGRHGGGAFSGKDPTKVDRSAAYAARWVAKNLVAAGIADKLEVQVAYAIGVAKPVSIIVDTFGTGKISDEEIVNIINKVF 342          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_BACC2 (S-adenosylmethionine synthetase OS=Bacillus cereus (strain G9842) GN=metK PE=3 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 2.432e-61
Identity = 121/206 (58.74%), Postives = 149/206 (72.33%), Query Frame = 2
Query:    5 ELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            ELMPL + LA KL  RLTEVRK+ T  +LRPDGKTQVTVEY   G    P RV T++ISTQH   VT E+I  DLKEHVIK V+PA  +D  T F +NP+GRFVIGGP GDAGLTGRKII+DTY             KD+TKVDRSAAY  R  AK++VA+GLA +  VQ++YAIGV +P+S+ VDT+GTGK+S+  ++ L++ NF
Sbjct:  146 ELMPLPISLAHKLARRLTEVRKDDTLSYLRPDGKTQVTVEYDENGK---PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELMDGETKFFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSAAYAARYVAKNIVAAGLADKAEVQLAYAIGVAQPVSISVDTFGTGKVSEDVLVELVRNNF 348          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK5_CAEEL (Probable S-adenosylmethionine synthetase 5 OS=Caenorhabditis elegans GN=sams-5 PE=2 SV=2)

HSP 1 Score: 234.572 bits (597), Expect = 3.176e-61
Identity = 115/206 (55.83%), Postives = 149/206 (72.33%), Query Frame = 2
Query:    5 ELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            E MPLTL+L+ KL  +L E+R++    W+RPD KTQVT+EY +EGGA VP RVHTV+ISTQH   ++ E + ++L E VIK VIP + +D  T++HLNP G FV+GGP GDAGLTGRKII+DTY             KD TKVDRSAAY  R  AKS+V +GL RRCLVQVSYAIGV +PLSV V ++GT  +++ ++L ++ +NF
Sbjct:  136 EAMPLTLLLSHKLNYKLHELRRSGELEWVRPDSKTQVTIEYSSEGGACVPLRVHTVVISTQHSPDISLEDLRKELIEKVIKVVIPGNLIDNDTVYHLNPCGSFVVGGPMGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVAKSLVKAGLCRRCLVQVSYAIGVAKPLSVMVFSFGTSALNEAELLKIVNDNF 341          
The following BLAST results are available for this feature:
BLAST of DR403404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_BACAA3.751e-6259.22S-adenosylmethionine synthetase OS=Bacillus anthra... [more]
METK_CARHZ6.399e-6256.52S-adenosylmethionine synthetase OS=Carboxydothermu... [more]
METK_BACCR1.426e-6158.74S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_BACC41.426e-6158.74S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_BACC11.426e-6158.74S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK_GEOTN1.862e-6155.83S-adenosylmethionine synthetase OS=Geobacillus the... [more]
METK_CLOPS1.862e-6158.25S-adenosylmethionine synthetase OS=Clostridium per... [more]
METK_CLOP11.862e-6158.25S-adenosylmethionine synthetase OS=Clostridium per... [more]
METK_BACC22.432e-6158.74S-adenosylmethionine synthetase OS=Bacillus cereus... [more]
METK5_CAEEL3.176e-6155.83Probable S-adenosylmethionine synthetase 5 OS=Caen... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244O13 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244O13 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403404 ID=DR403404; Name=DR403404; organism=Citrus sinensis; type=EST; length=624bp
ACCTGAGCTAATGCCGCTGACTCTCGTTCTTGCCACCAAGCTTGGAGCCA
GACTTACTGAGGTGAGAAAGAATAAGACATGCCCCTGGCTGAGGCCGGAT
GGAAAAACCCAGGTGACTGTTGAGTACCGGAACGAAGGTGGAGCCATGGT
CCCACAGAGGGTCCACACTGTTCTCATTTCAACCCAGCACGATGAAACTG
TCACCAAGGAGCAGATTTCTGAGGACCTGAAGGAGCATGTGATTAAACCA
GTCATTCCGGCACATTTCCTTGATGAAAGGACAATCTTCCACCTCAACCC
CTCTGGTCGTTTTGTCATTGGCGGGCCACATGGGGATGCAGGGCTTACCG
GTAGGAAGATCATCATTGATACTTATGGTGGTTGGGGTGCTCATGGTGGC
GGTGCCTTCTCTGGCAAGGATTCTACAAAGGTCGATCGAAGTGCTGCATA
TATTGTCAGGCAGGCTGCAAAGAGTGTGGTGGCTTCTGGGCTTGCCCGTC
GCTGTCTTGTCCAGGTCTCTTATGCCATTGGTGTGCCAGAACCGCTGTCT
GTGTTTGTGGACACTTATGGTACAGGAAAGATTTCAGATAAGGATATACT
GGCTCTAATTAAGGAGAACTTTGA
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