DR403404

Overview
NameDR403404
Unique NameDR403404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length624
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_GEOKA (S-adenosylmethionine synthetase OS=Geobacillus kaustophilus GN=metK PE=3 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 5.417e-61
Identity = 114/206 (55.34%), Postives = 147/206 (71.36%), Query Frame = 2
Query:    5 ELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            ELMP+ + LA +L  RL EVRK    P+LRPDGKTQVT+EY   G    P RV T+++S QH   +T+EQI  D+KE VIKPV+PA  LDE T + +NP+GRFVIGGP GDAGLTGRKII+DTY             KD TKVDRSAAY  R  AK++VA+GLA +C VQ++YAIGV  P+S+ +DT+GTGK+S+  ++ +++ NF
Sbjct:  146 ELMPMPISLAHRLARRLAEVRKTDVLPYLRPDGKTQVTIEYDENGK---PVRVDTIVVSAQHHPEITQEQIQRDIKEQVIKPVVPAELLDENTKYFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLADKCEVQLAYAIGVARPVSISIDTFGTGKVSEDILIEVVRNNF 348          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_BACWK (S-adenosylmethionine synthetase OS=Bacillus weihenstephanensis (strain KBAB4) GN=metK PE=3 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 7.075e-61
Identity = 121/206 (58.74%), Postives = 148/206 (71.84%), Query Frame = 2
Query:    5 ELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            ELMPL + LA KL  RLTEVRK+ T  +LRPDGKTQVTVEY   G    P RV T++ISTQH   VT E+I  DLKEHVIK V+PA  +D  T F +NP+GRFVIGGP GDAGLTGRKII+DTY             KD+TKVDRSAAY  R  AK++VA+GLA +  VQ++YAIGV +P+S+ VDT GTGK+S+  ++ L++ NF
Sbjct:  146 ELMPLPISLAHKLARRLTEVRKDDTLSYLRPDGKTQVTVEYDENGK---PVRVDTIVISTQHHPDVTWEEIDRDLKEHVIKAVVPAELMDGETKFFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSAAYAARYVAKNIVAAGLADKAEVQLAYAIGVAQPVSISVDTLGTGKVSEDVLVELVRNNF 348          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_LEIIN (S-adenosylmethionine synthetase OS=Leishmania infantum GN=METK PE=2 SV=2)

HSP 1 Score: 233.032 bits (593), Expect = 9.240e-61
Identity = 123/209 (58.85%), Postives = 146/209 (69.86%), Query Frame = 2
Query:    8 LMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEY----RNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            LMPLT  LA  L  + +E+R++ +  W RPD KTQVTVEY    R     + P+RV  VLIS QHDE VT ++IS DL E VIK VIPA+ LD  T + LNPSGRFV GGPHGDAGLTGRKII+DTY             KD +KVDRSAAY  R  AKS+VA GLARRCLVQ++YAIGV EPLS+ V+TYGTGK  D  +L ++K+NF
Sbjct:  136 LMPLTYELARGLAKKYSELRRSGSLEWARPDAKTQVTVEYDYDTREGKQVLTPKRVAVVLISAQHDEHVTNDKISVDLMEKVIKAVIPANMLDAETKYWLNPSGRFVRGGPHGDAGLTGRKIIVDTYGGWGAHGGGAFSGKDPSKVDRSAAYAARWIAKSIVAGGLARRCLVQLAYAIGVAEPLSMHVETYGTGKYDDAKLLEIVKQNF 344          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_BACLD (S-adenosylmethionine synthetase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=metK PE=3 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 9.240e-61
Identity = 115/206 (55.83%), Postives = 149/206 (72.33%), Query Frame = 2
Query:    5 ELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            ELMPL + LA KL  RLTEVRK +  P+LRPDGKTQVTVEY        P R+ T++ISTQH   ++ EQI  +LKEHVI PV+P   +DE T + +NP+GRFVIGGP GDAGLTGRKII+DTY             KD+TKVDRSAAY  R  AK++VA+GLA  C VQ++YAIGV +P+S+ +DT+GTGK S++ ++ ++++NF
Sbjct:  146 ELMPLPISLAHKLSRRLTEVRKEEILPYLRPDGKTQVTVEYDENNK---PIRIDTIVISTQHHPEISLEQIQRNLKEHVINPVVPKELIDENTKYFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDATKVDRSAAYAARYVAKNIVAAGLADSCEVQLAYAIGVAQPVSISIDTFGTGKASEETLIEVVRKNF 348          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_PELTS (S-adenosylmethionine synthetase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=metK PE=3 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 4.586e-60
Identity = 115/207 (55.56%), Postives = 147/207 (71.01%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPL + LA +L  RL EVRK++  P+LRPDGKTQVTVEY N      P RV T++ISTQH   VT ++I   + EHV+KPV+P  FLD  T F +NP+GRFVIGGP GD GLTGRKII+DTY             KD TKVDRSA+Y  R  AK++VA+GLA +C  QV+YAIGV  P+S+ VDT+GTG++ ++ ++ L+KE+F
Sbjct:  143 PELMPLPISLAHRLARRLAEVRKSRLLPYLRPDGKTQVTVEYENGR----PVRVDTIVISTQHHPRVTLDEIRSGVLEHVVKPVVPPEFLDGSTRFFVNPTGRFVIGGPQGDTGLTGRKIIVDTYGGMARHGGGSFSGKDPTKVDRSASYAARYVAKNIVAAGLAEKCEFQVAYAIGVAHPVSMMVDTFGTGRVDEQTLVKLVKEHF 345          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_ANATD (S-adenosylmethionine synthetase OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=metK PE=3 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 5.989e-60
Identity = 121/207 (58.45%), Postives = 143/207 (69.08%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            P LMP+ + LA KL  RL  VRK    P+LRPDGKTQVTVEY ++     P RV TV++STQH   VT  QI  D+ EHVIKPVIP   LD+ T   +NP+GRFVIGGP GD+GLTGRKII+DTY             KD TKVDRSA Y  R  AK++VASGLA++C VQVSYAIGV  PLS+ VDT+GTGKISD+ I  ++K  F
Sbjct:  142 PVLMPMPIYLAHKLARRLAYVRKEGILPYLRPDGKTQVTVEYEDDK----PVRVDTVVVSTQHSPEVTHAQIEADVIEHVIKPVIPEGMLDKNTKIFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSATYAARYVAKNIVASGLAKKCEVQVSYAIGVARPLSIRVDTFGTGKISDEKIAEIVKRVF 344          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_SYNWW (S-adenosylmethionine synthetase OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=metK PE=3 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.334e-59
Identity = 117/205 (57.07%), Postives = 147/205 (71.71%), Query Frame = 2
Query:    8 LMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            LMP+ + LA+K+  RL EVRK    P+LRPDGKTQVTVEY +      P RV TV++S QH   V+   I +D+ EHVIK VIP   +D  TIF++NP+GRFVIGGP GD+GLTGRKII+DTY             KD TKVDRSA+Y++R  AK++VA+GLA RC +QV+YAIGV  PLS+ V+T+GTGKISD  I+ LIK+NF
Sbjct:  145 LMPMPIYLASKMAERLGEVRKEGIIPYLRPDGKTQVTVEYED----YKPLRVTTVVVSAQHHPEVSSATIEKDIIEHVIKAVIPPEMIDAHTIFYVNPTGRFVIGGPQGDSGLTGRKIIVDTYGGMARHGGGAFSGKDPTKVDRSASYMLRYVAKNIVAAGLAERCEIQVAYAIGVANPLSINVNTFGTGKISDDKIIELIKKNF 345          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_BACHD (S-adenosylmethionine synthetase OS=Bacillus halodurans GN=metK PE=3 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 2.276e-59
Identity = 112/207 (54.11%), Postives = 149/207 (71.98%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPL + L+ KL  RL+E RK +  P+LRPDGKTQVTVEY     ++   R+ T++ISTQH   VT EQI  DLK+HVI+ V+P   +DE T + +NP+GRFVIGGP GDAGLTGRKII+DTY             KD TKVDRS AY  R  AK++VA+GLA +C VQ++YAIGV +P+S+ +DT+GTG++S+  ++ L++E+F
Sbjct:  147 PELMPLPISLSHKLARRLSEARKGEILPYLRPDGKTQVTVEYDENDQSV---RIDTIVISTQHHPEVTLEQIESDLKQHVIRSVVPEELIDEETKYFINPTGRFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSGAYAARYVAKNIVAAGLADKCEVQLAYAIGVAKPVSISIDTFGTGQVSEARLVELVREHF 350          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK1_CAEEL (Probable S-adenosylmethionine synthetase 1 OS=Caenorhabditis elegans GN=sams-1 PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 3.882e-59
Identity = 108/206 (52.43%), Postives = 148/206 (71.84%), Query Frame = 2
Query:    5 ELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            E MPLTL+L+ K+ A L ++R+N T PW+RPD K+QVT+EY +  GA +P RVHTV++STQH   VT E++ E +   VIK VIPA  LDE T+FH+NP G F++GGP GDAG+TGRKII+DTY             KD TKVDRSAAY  R  A S+V +GLA+R LVQ+SYAIG+ +P+SV V  +GT  ++D+++  +++++F
Sbjct:  135 ETMPLTLILSHKINAELHKLRRNGTLPWVRPDSKSQVTIEYESRHGATIPLRVHTVVVSTQHSPDVTLEKLRETILADVIKKVIPASLLDESTVFHINPCGTFIVGGPMGDAGVTGRKIIVDTYGGWGAHGGGAFSGKDPTKVDRSAAYAARWVATSLVKAGLAKRVLVQLSYAIGIAKPISVLVYAFGTSPLTDEELHQIVEDSF 340          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_CALS8 (S-adenosylmethionine synthetase OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=metK PE=3 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 8.648e-59
Identity = 116/207 (56.04%), Postives = 143/207 (69.08%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            P LMP+ + LA KL  RL  VRK    P+LRPDGKTQVTVEY ++     P RV T+++STQH   VT  QI  D+ EHVIKP+IP   LD+ T  ++NP+GRFVIGGP GD+GLTGRKII+DTY             KD TKVDRSA Y  R  AK++VA+GLA++C VQ+SYAIGV  PLS+ VDT+GTGKI D+ I  ++K  F
Sbjct:  142 PVLMPMPIYLAHKLARRLAYVRKGGILPYLRPDGKTQVTVEYEDDR----PIRVDTIVVSTQHSPEVTHAQIEADVIEHVIKPIIPEGMLDKNTKIYINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSATYAARYVAKNIVAAGLAKKCEVQLSYAIGVARPLSIRVDTFGTGKIDDEKIAEIVKRVF 344          
The following BLAST results are available for this feature:
BLAST of DR403404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_GEOKA5.417e-6155.34S-adenosylmethionine synthetase OS=Geobacillus kau... [more]
METK_BACWK7.075e-6158.74S-adenosylmethionine synthetase OS=Bacillus weihen... [more]
METK_LEIIN9.240e-6158.85S-adenosylmethionine synthetase OS=Leishmania infa... [more]
METK_BACLD9.240e-6155.83S-adenosylmethionine synthetase OS=Bacillus lichen... [more]
METK_PELTS4.586e-6055.56S-adenosylmethionine synthetase OS=Pelotomaculum t... [more]
METK_ANATD5.989e-6058.45S-adenosylmethionine synthetase OS=Anaerocellum th... [more]
METK_SYNWW1.334e-5957.07S-adenosylmethionine synthetase OS=Syntrophomonas ... [more]
METK_BACHD2.276e-5954.11S-adenosylmethionine synthetase OS=Bacillus halodu... [more]
METK1_CAEEL3.882e-5952.43Probable S-adenosylmethionine synthetase 1 OS=Caen... [more]
METK_CALS88.648e-5956.04S-adenosylmethionine synthetase OS=Caldicellulosir... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244O13 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244O13 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403404 ID=DR403404; Name=DR403404; organism=Citrus sinensis; type=EST; length=624bp
ACCTGAGCTAATGCCGCTGACTCTCGTTCTTGCCACCAAGCTTGGAGCCA
GACTTACTGAGGTGAGAAAGAATAAGACATGCCCCTGGCTGAGGCCGGAT
GGAAAAACCCAGGTGACTGTTGAGTACCGGAACGAAGGTGGAGCCATGGT
CCCACAGAGGGTCCACACTGTTCTCATTTCAACCCAGCACGATGAAACTG
TCACCAAGGAGCAGATTTCTGAGGACCTGAAGGAGCATGTGATTAAACCA
GTCATTCCGGCACATTTCCTTGATGAAAGGACAATCTTCCACCTCAACCC
CTCTGGTCGTTTTGTCATTGGCGGGCCACATGGGGATGCAGGGCTTACCG
GTAGGAAGATCATCATTGATACTTATGGTGGTTGGGGTGCTCATGGTGGC
GGTGCCTTCTCTGGCAAGGATTCTACAAAGGTCGATCGAAGTGCTGCATA
TATTGTCAGGCAGGCTGCAAAGAGTGTGGTGGCTTCTGGGCTTGCCCGTC
GCTGTCTTGTCCAGGTCTCTTATGCCATTGGTGTGCCAGAACCGCTGTCT
GTGTTTGTGGACACTTATGGTACAGGAAAGATTTCAGATAAGGATATACT
GGCTCTAATTAAGGAGAACTTTGA
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