DR403404

Overview
NameDR403404
Unique NameDR403404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length624
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_BURPS (S-adenosylmethionine synthetase OS=Burkholderia pseudomallei GN=metK PE=1 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.522e-50
Identity = 104/207 (50.24%), Postives = 136/207 (65.70%), Query Frame = 2 
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPL + L+ +L  R   +R++   PWLRPD K+QVTV Y +      P  + TV++STQH   +    + E + E VIKP +PA  +     F +NP+GRFVIGGP GD GLTGRKII+DTY             KD +KVDRSAAY  R  AK++VA+GLA R L+QVSYAIGV EP SV V+T+GTG++SD+ I  L++E+F
Sbjct:  135 PELMPLPIHLSHRLVERQANLRRDGRLPWLRPDAKSQVTVRYVDGK----PHSIDTVVLSTQHAPEIDLPALREAVIEEVIKPTLPADLIKGDIKFLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDETITKLVREHF 337
[Close]
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_BURP8 (S-adenosylmethionine synthetase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=metK PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.522e-50
Identity = 102/207 (49.28%), Postives = 136/207 (65.70%), Query Frame = 2 
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPL + L+ +L  R   +R++   PWLRPD K+QVT+ Y +      P  + TV++STQH   +   Q+ E + E +IKP +PA  +     F +NP+GRFVIGGP GD GLTGRKII+DTY             KD +KVDRSAAY  R  AK++VA+GLA R L+QVSYAIGV +P SV V+T+GTG++SD  I  L++E+F
Sbjct:  135 PELMPLPIHLSHRLVERQANLRRDGRLPWLRPDAKSQVTIRYVDGK----PHSIDTVVLSTQHSPDIDLGQLREAVIEEIIKPTLPAELIKGDIKFLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAQPTSVMVNTFGTGRVSDATITRLVQEHF 337
[Close]
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_BURP6 (S-adenosylmethionine synthetase OS=Burkholderia pseudomallei (strain 668) GN=metK PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.522e-50
Identity = 104/207 (50.24%), Postives = 136/207 (65.70%), Query Frame = 2 
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPL + L+ +L  R   +R++   PWLRPD K+QVTV Y +      P  + TV++STQH   +    + E + E VIKP +PA  +     F +NP+GRFVIGGP GD GLTGRKII+DTY             KD +KVDRSAAY  R  AK++VA+GLA R L+QVSYAIGV EP SV V+T+GTG++SD+ I  L++E+F
Sbjct:  135 PELMPLPIHLSHRLVERQANLRRDGRLPWLRPDAKSQVTVRYVDGK----PHSIDTVVLSTQHAPEIDLPALREAVIEEVIKPTLPADLIKGDIKFLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDETITKLVREHF 337
[Close]
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_BURP1 (S-adenosylmethionine synthetase OS=Burkholderia pseudomallei (strain 1710b) GN=metK PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.522e-50
Identity = 104/207 (50.24%), Postives = 136/207 (65.70%), Query Frame = 2 
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPL + L+ +L  R   +R++   PWLRPD K+QVTV Y +      P  + TV++STQH   +    + E + E VIKP +PA  +     F +NP+GRFVIGGP GD GLTGRKII+DTY             KD +KVDRSAAY  R  AK++VA+GLA R L+QVSYAIGV EP SV V+T+GTG++SD+ I  L++E+F
Sbjct:  135 PELMPLPIHLSHRLVERQANLRRDGRLPWLRPDAKSQVTVRYVDGK----PHSIDTVVLSTQHAPEIDLPALREAVIEEVIKPTLPADLIKGDIKFLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDETITKLVREHF 337
[Close]
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_BURP0 (S-adenosylmethionine synthetase OS=Burkholderia pseudomallei (strain 1106a) GN=metK PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.522e-50
Identity = 104/207 (50.24%), Postives = 136/207 (65.70%), Query Frame = 2 
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPL + L+ +L  R   +R++   PWLRPD K+QVTV Y +      P  + TV++STQH   +    + E + E VIKP +PA  +     F +NP+GRFVIGGP GD GLTGRKII+DTY             KD +KVDRSAAY  R  AK++VA+GLA R L+QVSYAIGV EP SV V+T+GTG++SD+ I  L++E+F
Sbjct:  135 PELMPLPIHLSHRLVERQANLRRDGRLPWLRPDAKSQVTVRYVDGK----PHSIDTVVLSTQHAPEIDLPALREAVIEEVIKPTLPADLIKGDIKFLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDETITKLVREHF 337
[Close]
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_BURMS (S-adenosylmethionine synthetase OS=Burkholderia mallei (strain SAVP1) GN=metK PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.522e-50
Identity = 104/207 (50.24%), Postives = 136/207 (65.70%), Query Frame = 2 
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPL + L+ +L  R   +R++   PWLRPD K+QVTV Y +      P  + TV++STQH   +    + E + E VIKP +PA  +     F +NP+GRFVIGGP GD GLTGRKII+DTY             KD +KVDRSAAY  R  AK++VA+GLA R L+QVSYAIGV EP SV V+T+GTG++SD+ I  L++E+F
Sbjct:  135 PELMPLPIHLSHRLVERQANLRRDGRLPWLRPDAKSQVTVRYVDGK----PHSIDTVVLSTQHAPEIDLPALREAVIEEVIKPTLPADLIKGDIKFLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDETITKLVREHF 337
[Close]
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_BURMA (S-adenosylmethionine synthetase OS=Burkholderia mallei GN=metK PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.522e-50
Identity = 104/207 (50.24%), Postives = 136/207 (65.70%), Query Frame = 2 
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPL + L+ +L  R   +R++   PWLRPD K+QVTV Y +      P  + TV++STQH   +    + E + E VIKP +PA  +     F +NP+GRFVIGGP GD GLTGRKII+DTY             KD +KVDRSAAY  R  AK++VA+GLA R L+QVSYAIGV EP SV V+T+GTG++SD+ I  L++E+F
Sbjct:  135 PELMPLPIHLSHRLVERQANLRRDGRLPWLRPDAKSQVTVRYVDGK----PHSIDTVVLSTQHAPEIDLPALREAVIEEVIKPTLPADLIKGDIKFLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDETITKLVREHF 337
[Close]
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_BURM9 (S-adenosylmethionine synthetase OS=Burkholderia mallei (strain NCTC 10229) GN=metK PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.522e-50
Identity = 104/207 (50.24%), Postives = 136/207 (65.70%), Query Frame = 2 
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPL + L+ +L  R   +R++   PWLRPD K+QVTV Y +      P  + TV++STQH   +    + E + E VIKP +PA  +     F +NP+GRFVIGGP GD GLTGRKII+DTY             KD +KVDRSAAY  R  AK++VA+GLA R L+QVSYAIGV EP SV V+T+GTG++SD+ I  L++E+F
Sbjct:  135 PELMPLPIHLSHRLVERQANLRRDGRLPWLRPDAKSQVTVRYVDGK----PHSIDTVVLSTQHAPEIDLPALREAVIEEVIKPTLPADLIKGDIKFLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDETITKLVREHF 337
[Close]
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_BURM7 (S-adenosylmethionine synthetase OS=Burkholderia mallei (strain NCTC 10247) GN=metK PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.522e-50
Identity = 104/207 (50.24%), Postives = 136/207 (65.70%), Query Frame = 2 
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPL + L+ +L  R   +R++   PWLRPD K+QVTV Y +      P  + TV++STQH   +    + E + E VIKP +PA  +     F +NP+GRFVIGGP GD GLTGRKII+DTY             KD +KVDRSAAY  R  AK++VA+GLA R L+QVSYAIGV EP SV V+T+GTG++SD+ I  L++E+F
Sbjct:  135 PELMPLPIHLSHRLVERQANLRRDGRLPWLRPDAKSQVTVRYVDGK----PHSIDTVVLSTQHAPEIDLPALREAVIEEVIKPTLPADLIKGDIKFLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDETITKLVREHF 337
[Close]
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_ACIF5 (S-adenosylmethionine synthetase OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=metK PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.522e-50
Identity = 101/205 (49.27%), Postives = 137/205 (66.83%), Query Frame = 2 
Query:    8 LMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            LMP  +  A +L  R   VRK+   PWLRPD K+QVTV Y ++     P  + TV++STQH   ++   + E ++E +IKPV+P   + + T + +NP+GRFVIGGP GD GLTGRKII+DTY             KD +KVDRS++Y  R  AK++VA+GLARRC VQV+YAIGV +P+S+ VDT+GTG I D  I AL++E+F
Sbjct:  137 LMPTPIYFAHRLTERQAMVRKDGRLPWLRPDAKSQVTVRYEDDR----PVAIDTVVLSTQHAPDISHADLVEAVREEIIKPVLPPEMIHKDTKYLINPTGRFVIGGPVGDCGLTGRKIIVDTYGGQGSHGGGAFSGKDPSKVDRSSSYAGRYVAKNIVAAGLARRCEVQVAYAIGVSQPVSLMVDTFGTGVIDDDRIAALVQEHF 337
The following BLAST results are available for this feature:
BLAST of DR403404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_BURPS2.522e-5050.24S-adenosylmethionine synthetase OS=Burkholderia ps... [more]
METK_BURP82.522e-5049.28S-adenosylmethionine synthetase OS=Burkholderia ph... [more]
METK_BURP62.522e-5050.24S-adenosylmethionine synthetase OS=Burkholderia ps... [more]
METK_BURP12.522e-5050.24S-adenosylmethionine synthetase OS=Burkholderia ps... [more]
METK_BURP02.522e-5050.24S-adenosylmethionine synthetase OS=Burkholderia ps... [more]
METK_BURMS2.522e-5050.24S-adenosylmethionine synthetase OS=Burkholderia ma... [more]
METK_BURMA2.522e-5050.24S-adenosylmethionine synthetase OS=Burkholderia ma... [more]
METK_BURM92.522e-5050.24S-adenosylmethionine synthetase OS=Burkholderia ma... [more]
METK_BURM72.522e-5050.24S-adenosylmethionine synthetase OS=Burkholderia ma... [more]
METK_ACIF52.522e-5049.27S-adenosylmethionine synthetase OS=Acidithiobacill... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244O13 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244O13 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403404 ID=DR403404; Name=DR403404; organism=Citrus sinensis; type=EST; length=624bp
ACCTGAGCTAATGCCGCTGACTCTCGTTCTTGCCACCAAGCTTGGAGCCA
GACTTACTGAGGTGAGAAAGAATAAGACATGCCCCTGGCTGAGGCCGGAT
GGAAAAACCCAGGTGACTGTTGAGTACCGGAACGAAGGTGGAGCCATGGT
CCCACAGAGGGTCCACACTGTTCTCATTTCAACCCAGCACGATGAAACTG
TCACCAAGGAGCAGATTTCTGAGGACCTGAAGGAGCATGTGATTAAACCA
GTCATTCCGGCACATTTCCTTGATGAAAGGACAATCTTCCACCTCAACCC
CTCTGGTCGTTTTGTCATTGGCGGGCCACATGGGGATGCAGGGCTTACCG
GTAGGAAGATCATCATTGATACTTATGGTGGTTGGGGTGCTCATGGTGGC
GGTGCCTTCTCTGGCAAGGATTCTACAAAGGTCGATCGAAGTGCTGCATA
TATTGTCAGGCAGGCTGCAAAGAGTGTGGTGGCTTCTGGGCTTGCCCGTC
GCTGTCTTGTCCAGGTCTCTTATGCCATTGGTGTGCCAGAACCGCTGTCT
GTGTTTGTGGACACTTATGGTACAGGAAAGATTTCAGATAAGGATATACT
GGCTCTAATTAAGGAGAACTTTGA
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