DR403404

Overview
NameDR403404
Unique NameDR403404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length624
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_PELPB (S-adenosylmethionine synthetase OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=metK PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 3.294e-50
Identity = 106/201 (52.74%), Postives = 133/201 (66.17%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKN-KTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHD-------ETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGK 580
            P LMP  +  A  L  +L E+RK  K   +LRPD K+QVT+EY NE    V +RV  V++STQHD       E   +E I  D+ E+VIK VIPA  +DE T FH+NP+GRFVIGGPHGD GLTGRKII+DTY             KD +KVDRSAAY  R  AK++VA+GLA +C VQVSYAIGV  P+S++++T+ T K
Sbjct:  139 PVLMPAAIQFAQHLMKKLAEIRKEGKIMTYLRPDAKSQVTLEYENE----VVKRVDAVVVSTQHDPEPEGVSEAAWQEVIKNDIIENVIKVVIPADLIDENTKFHINPTGRFVIGGPHGDTGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAARHVAKNIVAAGLADKCTVQVSYAIGVARPVSIYINTHDTAK 335          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_HAEIN (S-adenosylmethionine synthetase OS=Haemophilus influenzae GN=metK PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 3.294e-50
Identity = 100/205 (48.78%), Postives = 143/205 (69.76%), Query Frame = 2
Query:    8 LMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            LMP  +  A +L  + +EVRK+    WLRPD K+QVT++Y  E   +V   V  V++STQH E V+++ + E + E +IKPV+P+ +L + T F +NP+GRFVIGGP GD GLTGRKII+DTY             K+ +KVDRSAAY  R  AK++VA+GLA RC +Q+SYAIGV EP S+ V+T+GTGK++++ +++L++E F
Sbjct:  134 LMPAAITYAHRLMEKQSEVRKSGKLAWLRPDAKSQVTLKY--EDNKIVG--VDAVVLSTQHSEEVSQKDLHEGVMEEIIKPVLPSEWLSKETKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAARHGGGAFSGKEPSKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGVAEPTSIMVETFGTGKVANELLVSLVREFF 334          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_HAEIG (S-adenosylmethionine synthetase OS=Haemophilus influenzae (strain PittGG) GN=metK PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 3.294e-50
Identity = 100/205 (48.78%), Postives = 142/205 (69.27%), Query Frame = 2
Query:    8 LMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            LMP  +  A +L  +  EVRK+    WLRPD K+QVT++Y  E   +V   V  V++STQH E V+++ + E + E +IKPV+P+ +L + T F +NP+GRFVIGGP GD GLTGRKII+DTY             KD +KVDRSAAY  R  AK++VA+GLA RC +Q+SYAIGV +P S+ V+T+GTGK++++ +++L++E F
Sbjct:  134 LMPAAITYAHRLMEKQAEVRKSGKLAWLRPDAKSQVTLKY--EDNKIVG--VDAVVLSTQHSEEVSQKDLHEGVMEEIIKPVLPSEWLSKETKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGVADPTSIMVETFGTGKVANELLVSLVREFF 334          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_BURTA (S-adenosylmethionine synthetase OS=Burkholderia thailandensis (strain E264 / ATCC 700388 / DSM 13276 / CIP 106301) GN=metK PE=3 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 3.294e-50
Identity = 103/207 (49.76%), Postives = 136/207 (65.70%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPL + L+ +L  R   +R++   PWLRPD K+QVTV Y +      P  + TV++STQH   +    + E + E +IKP +PA  +     F +NP+GRFVIGGP GD GLTGRKII+DTY             KD +KVDRSAAY  R  AK++VA+GLA R L+QVSYAIGV EP SV V+T+GTG++SD+ I  L++E+F
Sbjct:  135 PELMPLPIHLSHRLVERQANLRRDGRLPWLRPDAKSQVTVRYVDGK----PHSIDTVVLSTQHAPDIDLPALREAVIEEIIKPTLPADLIKGDIKFLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDETITKLVREHF 337          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_SYNPX (S-adenosylmethionine synthetase OS=Synechococcus sp. (strain WH8102) GN=metK PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 4.302e-50
Identity = 109/218 (50.00%), Postives = 143/218 (65.60%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQH--------DETVTKEQISEDLKEHVIKPVIPAHFLD---ERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPL + LA +L  RL EVR N +  +L PDGKTQV+V Y N+     P  + T+LISTQH        DE   +E+I+EDL  HV++P      L    E T + +NP+G+FV+GGP GDAGLTGRKII+DTY             KD TKVDRSAAY  R  AK +VASGLA R  VQ+SYAIGV +P+S+ V+++GTGK+S+ ++  L++E+F
Sbjct:  139 PELMPLPISLAHRLAKRLAEVRHNGSLEYLLPDGKTQVSVVYENDK----PVAIDTILISTQHTAEVAGISDEQGIRERITEDLWTHVVEPATADLALKPSREATKYLVNPTGKFVVGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARYVAKCLVASGLAERAEVQLSYAIGVAKPVSILVESFGTGKVSNAELTELVQEHF 352          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_SORC5 (S-adenosylmethionine synthetase OS=Sorangium cellulosum (strain So ce56) GN=metK PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 4.302e-50
Identity = 100/206 (48.54%), Postives = 136/206 (66.02%), Query Frame = 2
Query:    5 ELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            ELMP  +  A +L  +L ++RK+K   WLRPDGKTQVT+EY ++     P RV  V++STQH   V  + I + ++  +I+  IPA  +D+ T  ++NP+GRFV+GGP GDAGLTGRKII+DTY             KD TKVDRSA Y  R  AK+VVAS LA RC VQ++YAIGV +P+ V V+T+GTG++ +  +   I +NF
Sbjct:  135 ELMPSPISYAHRLARKLADLRKSKKLDWLRPDGKTQVTIEYEDQ----TPVRVSAVVVSTQHSPEVKHKTIVDAVRSLIIEKCIPAKLMDKSTKIYVNPTGRFVVGGPFGDAGLTGRKIIVDTYGGMGRHGGGAFSGKDPTKVDRSACYYARYVAKNVVASKLAARCEVQIAYAIGVAQPVGVHVNTFGTGRVGEDVLEKYIMQNF 336          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_HAEIE (S-adenosylmethionine synthetase OS=Haemophilus influenzae (strain PittEE) GN=metK PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 4.302e-50
Identity = 100/205 (48.78%), Postives = 141/205 (68.78%), Query Frame = 2
Query:    8 LMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            LMP  +  A +L  +  EVRK+    WLRPD K+QVT++Y  E   +V   V  V++STQH E V+++ + E + E +IKPV+P  +L + T F +NP+GRFVIGGP GD GLTGRKII+DTY             KD +KVDRSAAY  R  AK++VA+GLA RC +Q+SYAIGV +P S+ V+T+GTGK++++ +++L++E F
Sbjct:  134 LMPAAITYAHRLMEKQAEVRKSGKLAWLRPDAKSQVTLKY--EDNKIVG--VDAVVLSTQHSEEVSQKDLHEGVMEEIIKPVLPTEWLSKETKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGVADPTSIMVETFGTGKVANELLVSLVREFF 334          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_HAEI8 (S-adenosylmethionine synthetase OS=Haemophilus influenzae (strain 86-028NP) GN=metK PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 4.302e-50
Identity = 100/205 (48.78%), Postives = 141/205 (68.78%), Query Frame = 2
Query:    8 LMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            LMP  +  A +L  +  EVRK+    WLRPD K+QVT++Y  E   +V   V  V++STQH E V+++ + E + E +IKPV+P  +L + T F +NP+GRFVIGGP GD GLTGRKII+DTY             KD +KVDRSAAY  R  AK++VA+GLA RC +Q+SYAIGV +P S+ V+T+GTGK++++ +++L++E F
Sbjct:  134 LMPAAITYAHRLMEKQAEVRKSGKLAWLRPDAKSQVTLKY--EDNKIVG--VDAVVLSTQHSEEVSQKDLHEGVMEEIIKPVLPTEWLSKETKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGVADPTSIMVETFGTGKVANELLVSLVREFF 334          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_ERWCT (S-adenosylmethionine synthetase OS=Erwinia carotovora subsp. atroseptica GN=metK PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 4.302e-50
Identity = 101/205 (49.27%), Postives = 139/205 (67.80%), Query Frame = 2
Query:    8 LMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            LMP  +  A +L  R +EVRK+ + PWLRPD K+QVT  Y  + G +    +  V++STQH E V+++ + E + E +IKPV+PA +L   T + +NP+GRFVIGGP GD GLTGRKII+DTY             KD +KVDRSAAY  R  AK++VA+GLA RC +QVSYAIGV EP S+ ++T+GT K+S++ +  L++E F
Sbjct:  134 LMPAPVTYAHRLVHRQSEVRKSGSLPWLRPDAKSQVTFLY--DDGKIAG--IDAVVLSTQHSEDVSQKDLHEAVMEEIIKPVLPAEWLSASTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMIETFGTEKVSNEQLTLLVREFF 334          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_CELJU (S-adenosylmethionine synthetase OS=Cellvibrio japonicus (strain Ueda107) GN=metK PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 4.302e-50
Identity = 98/205 (47.80%), Postives = 140/205 (68.29%), Query Frame = 2
Query:    8 LMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            LMP  +  A +L  +  ++RK+   PWLRPD K+QVT+ Y N      P  V  V++STQH  +V + +I E ++E +IK V+PA +L + T +H+NP+G+F+IGGP GD GLTGRKII+D+Y             KD +KVDRSAAY  R  AK++VA+GLA +C +QVSYAIGV EP S+ ++T+GTGK+ D +I+ L++E+F
Sbjct:  135 LMPAPIFYAHRLVEKQAQLRKSGELPWLRPDAKSQVTLRYENGK----PVAVDAVVLSTQHSPSVQQAEIHEAVRELIIKNVLPAEWLHKDTQYHINPTGQFIIGGPVGDCGLTGRKIIVDSYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLADKCEIQVSYAIGVAEPTSISINTFGTGKLPDAEIIKLVREHF 335          
The following BLAST results are available for this feature:
BLAST of DR403404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_PELPB3.294e-5052.74S-adenosylmethionine synthetase OS=Pelodictyon pha... [more]
METK_HAEIN3.294e-5048.78S-adenosylmethionine synthetase OS=Haemophilus inf... [more]
METK_HAEIG3.294e-5048.78S-adenosylmethionine synthetase OS=Haemophilus inf... [more]
METK_BURTA3.294e-5049.76S-adenosylmethionine synthetase OS=Burkholderia th... [more]
METK_SYNPX4.302e-5050.00S-adenosylmethionine synthetase OS=Synechococcus s... [more]
METK_SORC54.302e-5048.54S-adenosylmethionine synthetase OS=Sorangium cellu... [more]
METK_HAEIE4.302e-5048.78S-adenosylmethionine synthetase OS=Haemophilus inf... [more]
METK_HAEI84.302e-5048.78S-adenosylmethionine synthetase OS=Haemophilus inf... [more]
METK_ERWCT4.302e-5049.27S-adenosylmethionine synthetase OS=Erwinia carotov... [more]
METK_CELJU4.302e-5047.80S-adenosylmethionine synthetase OS=Cellvibrio japo... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244O13 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244O13 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403404 ID=DR403404; Name=DR403404; organism=Citrus sinensis; type=EST; length=624bp
ACCTGAGCTAATGCCGCTGACTCTCGTTCTTGCCACCAAGCTTGGAGCCA
GACTTACTGAGGTGAGAAAGAATAAGACATGCCCCTGGCTGAGGCCGGAT
GGAAAAACCCAGGTGACTGTTGAGTACCGGAACGAAGGTGGAGCCATGGT
CCCACAGAGGGTCCACACTGTTCTCATTTCAACCCAGCACGATGAAACTG
TCACCAAGGAGCAGATTTCTGAGGACCTGAAGGAGCATGTGATTAAACCA
GTCATTCCGGCACATTTCCTTGATGAAAGGACAATCTTCCACCTCAACCC
CTCTGGTCGTTTTGTCATTGGCGGGCCACATGGGGATGCAGGGCTTACCG
GTAGGAAGATCATCATTGATACTTATGGTGGTTGGGGTGCTCATGGTGGC
GGTGCCTTCTCTGGCAAGGATTCTACAAAGGTCGATCGAAGTGCTGCATA
TATTGTCAGGCAGGCTGCAAAGAGTGTGGTGGCTTCTGGGCTTGCCCGTC
GCTGTCTTGTCCAGGTCTCTTATGCCATTGGTGTGCCAGAACCGCTGTCT
GTGTTTGTGGACACTTATGGTACAGGAAAGATTTCAGATAAGGATATACT
GGCTCTAATTAAGGAGAACTTTGA
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