DR403404

Overview
NameDR403404
Unique NameDR403404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length624
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_SULNB (S-adenosylmethionine synthetase OS=Sulfurovum sp. (strain NBC37-1) GN=metK PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 5.619e-50
Identity = 103/207 (49.76%), Postives = 141/207 (68.12%), Query Frame = 2
Query:    5 ELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTI-FHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            ELMPL + LA  +  +L  VRKN T P+LRPDGK QV+V+Y +      P  V T+++STQH ETV+ EQ+ + +KE VI PV+  + +D   I +H+NP+GRFVIGGP GDAGLTGRKII+DTY             KD TKVDRSAAY  R  AK++VA+G   +  +QV+YAIGV +P+S++VDT+GT  I ++ I++ ++  F
Sbjct:  133 ELMPLPISLAHHITRKLAAVRKNGTVPFLRPDGKAQVSVKYVDGK----PVAVDTIVVSTQHHETVSLEQVQKAVKEEVIDPVLATYDIDISDITYHINPTGRFVIGGPQGDAGLTGRKIIVDTYGGSCPHGGGAFSGKDPTKVDRSAAYAARYVAKNLVAAGACDKATLQVAYAIGVAKPVSIYVDTHGTAHIDEEKIVSCVESLF 335          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_PECCP (S-adenosylmethionine synthetase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=metK PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 5.619e-50
Identity = 100/205 (48.78%), Postives = 138/205 (67.32%), Query Frame = 2
Query:    8 LMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            LMP  +  A +L  R +EVRK+ + PWLRPD K+QVT  Y  + G +    +  V++STQH E ++++ + E + E +IKPV+PA +L   T + +NP+GRFVIGGP GD GLTGRKII+DTY             KD +KVDRSAAY  R  AK++VA+GLA RC +QVSYAIGV EP S+ ++T+GT K+S + +  L++E F
Sbjct:  134 LMPAPVTYAHRLVQRQSEVRKSGSLPWLRPDAKSQVTFLY--DDGKIAG--IDAVVLSTQHSEEISQKDLHEAVMEEIIKPVLPAEWLSANTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMIETFGTEKVSTEQLTLLVREFF 334          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_MARMS (S-adenosylmethionine synthetase OS=Marinomonas sp. (strain MWYL1) GN=metK PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 5.619e-50
Identity = 100/205 (48.78%), Postives = 136/205 (66.34%), Query Frame = 2
Query:    8 LMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            LMP  +  A +L  R  EVRKN T  +LRPD K+QVT  Y   G    P  +  V++STQH  +V +  + E + E +IKPV+PA +L + T + +NP+G+F+IGGP GD GLTGRKII+DTY             KD +KVDRSAAY  R  AK++VA+GLA +C +Q+SYAIGV EP S+ ++T+GTGK+SD  I  L++E+F
Sbjct:  135 LMPAPITYAHRLVQRQAEVRKNGTLDFLRPDAKSQVTFRYDENGK---PCAIDAVVLSTQHSASVKQADLREAVMEEIIKPVLPAEWLSKETKYFINPTGQFIIGGPVGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLADKCEIQISYAIGVAEPTSISINTFGTGKVSDAVISQLVREHF 336          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_MARAV (S-adenosylmethionine synthetase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=metK PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 5.619e-50
Identity = 101/205 (49.27%), Postives = 136/205 (66.34%), Query Frame = 2
Query:    8 LMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            LMP  +  + +L  R  E RK+   PWLRPD K+QVT  Y N  G +V   +  V++STQHD  VT+  + E + E ++K  +PA  L + T FH+NP+G+FVIGGP GD GLTGRKII+DTY             KD +KVDRSAAY  R  AK++VA+GLA +C +QVSYAIGV +P S+ ++T+GTGKISD  I+ L++ +F
Sbjct:  135 LMPAPITFSHRLVQRQAEARKSGLLPWLRPDAKSQVTCRYEN--GKVVG--IDAVVLSTQHDPDVTQADLKEAVMELIVKHTLPAELLHKDTQFHINPTGKFVIGGPVGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAEKCEIQVSYAIGVAQPTSISLNTFGTGKISDDKIIDLVRAHF 335          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_BURCM (S-adenosylmethionine synthetase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=metK PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 5.619e-50
Identity = 103/207 (49.76%), Postives = 135/207 (65.22%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPL + L+ +L  R   +R++   PWLRPD K+QVTV Y +      P  + TV++STQH   +    + E + E +IKP +PA  +     F +NP+GRFVIGGP GD GLTGRKII+DTY             KD +KVDRSAAY  R  AK++VA+GLA R L+QVSYAIGV EP SV V+T+GTG++SD  I  L++E+F
Sbjct:  135 PELMPLPIYLSHRLVERQASLRRDGRLPWLRPDAKSQVTVRYVDGR----PDSIDTVVLSTQHAPDIELPALREAVIEEIIKPTLPADLIKGDIKFLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDAVITKLVREHF 337          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_BURA4 (S-adenosylmethionine synthetase OS=Burkholderia ambifaria (strain MC40-6) GN=metK PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 5.619e-50
Identity = 103/207 (49.76%), Postives = 135/207 (65.22%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPL + L+ +L  R   +R++   PWLRPD K+QVTV Y +      P  + TV++STQH   +    + E + E +IKP +PA  +     F +NP+GRFVIGGP GD GLTGRKII+DTY             KD +KVDRSAAY  R  AK++VA+GLA R L+QVSYAIGV EP SV V+T+GTG++SD  I  L++E+F
Sbjct:  135 PELMPLPIYLSHRLVERQASLRRDGRLPWLRPDAKSQVTVRYVDGR----PDSIDTVVLSTQHAPDIELPALREAVIEEIIKPTLPADLIKGDIKFLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLASRALIQVSYAIGVAEPTSVMVNTFGTGRVSDAVITKLVREHF 337          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_BUCAP (S-adenosylmethionine synthetase OS=Buchnera aphidicola subsp. Schizaphis graminum GN=metK PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 5.619e-50
Identity = 99/205 (48.29%), Postives = 139/205 (67.80%), Query Frame = 2
Query:    8 LMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            LMP  +  A  L  + +E+RK     WLRPD K+QVT +Y+N  G ++   + TV+ STQH E++T++ + E + E +IKPV+P  +L + T F +NP+GRFVIGGP GD GLTGRKII+DTY             KD +KVDRSAAY  R  AK++VA+GLA RC +Q+SYAIG+ EP S+ ++T+ TGKIS+K ++ L++  F
Sbjct:  134 LMPAPITYAHLLVKKQSELRKKNILHWLRPDAKSQVTFKYKN--GRIIG--IDTVVFSTQHKESITQDVLKEAVMEEIIKPVLPNKWLTKNTKFFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMSRHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGIAEPTSIMIETFRTGKISNKSLINLVRNIF 334          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_AZOVD (S-adenosylmethionine synthetase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=metK PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 5.619e-50
Identity = 101/205 (49.27%), Postives = 137/205 (66.83%), Query Frame = 2
Query:    8 LMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            LMP  +  + +L  R TE RK+   PWLRPD K+QVT  Y N  G +V   +  V++STQH+  +T+  + E + E +IK  +PA  L + T FH+NP+G+FVIGGP GD GLTGRKII+D+Y             KD +KVDRSAAY  R  AK++VA+GLA RC +QVSYAIGV +P S+ ++T+GTGKI D  I+ L++E+F
Sbjct:  135 LMPAPICFSHRLVERQTEARKSGLLPWLRPDAKSQVTCRYEN--GKVVG--IDAVVLSTQHNPEITQADLHEAVMELIIKHTLPAELLHKDTQFHINPTGKFVIGGPVGDCGLTGRKIIVDSYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAERCEIQVSYAIGVAQPTSISINTFGTGKIGDDRIVQLVREHF 335          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_ACTSZ (S-adenosylmethionine synthetase OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=metK PE=3 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 5.619e-50
Identity = 99/204 (48.53%), Postives = 143/204 (70.10%), Query Frame = 2
Query:   11 MPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            MP  +  A +L  R  +VRK+ T  WLRPD K+Q+T +Y  E   +V   +  V++STQH E+V+++++ E + E +IKPV+PA +LD+ T + +NP+GRFVIGGP GD GLTGRKII+DTY             KD +KVDRSAAY  R  AK++VA+GLA RC +Q+SYAIGV EP S+ ++T+GTGK++++ ++ L++E F
Sbjct:  135 MPAPITYAHRLMERQAKVRKDGTLDWLRPDAKSQLTFKY--EDNKIVG--IDAVVLSTQHAESVSQKEVHEGVMEEIIKPVLPAKWLDKDTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGVAEPTSIMLETFGTGKVANELLVKLVREFF 334          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_XANOR (S-adenosylmethionine synthetase OS=Xanthomonas oryzae pv. oryzae GN=metK PE=3 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 7.338e-50
Identity = 103/206 (50.00%), Postives = 139/206 (67.48%), Query Frame = 2
Query:   11 MPLTLVLATKLGARLTEVRK--NKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            MP  + L+ +L  +  ++RK  N    WLRPD K+QVT+ Y +     V   +  V++STQHD  V ++ + E ++E ++KPV+PA +L + T FH+NP+G+FVIGGP GD GLTGRKII+DTY             KD +KVDRSAAY  R  AK+VVA+GLA RC VQVSYAIGV EP S+ V T+GTGKI+D+ I  LI+++F
Sbjct:  135 MPAAIHLSHRLVEQQAKIRKKKNSALSWLRPDAKSQVTLRYEDG----VATAIDAVVLSTQHDPGVKQKDLIEAVREEILKPVLPAKWLHKGTKFHINPTGKFVIGGPVGDCGLTGRKIIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLADRCEVQVSYAIGVAEPTSISVTTFGTGKIADEQIEKLIRKHF 336          
The following BLAST results are available for this feature:
BLAST of DR403404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_SULNB5.619e-5049.76S-adenosylmethionine synthetase OS=Sulfurovum sp. ... [more]
METK_PECCP5.619e-5048.78S-adenosylmethionine synthetase OS=Pectobacterium ... [more]
METK_MARMS5.619e-5048.78S-adenosylmethionine synthetase OS=Marinomonas sp.... [more]
METK_MARAV5.619e-5049.27S-adenosylmethionine synthetase OS=Marinobacter aq... [more]
METK_BURCM5.619e-5049.76S-adenosylmethionine synthetase OS=Burkholderia am... [more]
METK_BURA45.619e-5049.76S-adenosylmethionine synthetase OS=Burkholderia am... [more]
METK_BUCAP5.619e-5048.29S-adenosylmethionine synthetase OS=Buchnera aphidi... [more]
METK_AZOVD5.619e-5049.27S-adenosylmethionine synthetase OS=Azotobacter vin... [more]
METK_ACTSZ5.619e-5048.53S-adenosylmethionine synthetase OS=Actinobacillus ... [more]
METK_XANOR7.338e-5050.00S-adenosylmethionine synthetase OS=Xanthomonas ory... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244O13 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244O13 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403404 ID=DR403404; Name=DR403404; organism=Citrus sinensis; type=EST; length=624bp
ACCTGAGCTAATGCCGCTGACTCTCGTTCTTGCCACCAAGCTTGGAGCCA
GACTTACTGAGGTGAGAAAGAATAAGACATGCCCCTGGCTGAGGCCGGAT
GGAAAAACCCAGGTGACTGTTGAGTACCGGAACGAAGGTGGAGCCATGGT
CCCACAGAGGGTCCACACTGTTCTCATTTCAACCCAGCACGATGAAACTG
TCACCAAGGAGCAGATTTCTGAGGACCTGAAGGAGCATGTGATTAAACCA
GTCATTCCGGCACATTTCCTTGATGAAAGGACAATCTTCCACCTCAACCC
CTCTGGTCGTTTTGTCATTGGCGGGCCACATGGGGATGCAGGGCTTACCG
GTAGGAAGATCATCATTGATACTTATGGTGGTTGGGGTGCTCATGGTGGC
GGTGCCTTCTCTGGCAAGGATTCTACAAAGGTCGATCGAAGTGCTGCATA
TATTGTCAGGCAGGCTGCAAAGAGTGTGGTGGCTTCTGGGCTTGCCCGTC
GCTGTCTTGTCCAGGTCTCTTATGCCATTGGTGTGCCAGAACCGCTGTCT
GTGTTTGTGGACACTTATGGTACAGGAAAGATTTCAGATAAGGATATACT
GGCTCTAATTAAGGAGAACTTTGA
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