DR403404

Overview
NameDR403404
Unique NameDR403404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length624
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_YERPN (S-adenosylmethionine synthetase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=metK PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 9.584e-50
Identity = 101/205 (49.27%), Postives = 134/205 (65.37%), Query Frame = 2
Query:    8 LMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            LMP  +  A +L  R  EVRKN   PWLRPD K+QVT +Y  + G +V   +  V++STQH E + ++ + E + E +IKPV+PA ++   T + +NP+GRFVIGGP GD GLTGRKII+DTY             KD +KVDRSAAY  R  AK++VA+GLA RC +QVSYAIGV EP S+ V+ +GT KI    +  L++E F
Sbjct:  134 LMPAPITYAHRLVERQAEVRKNGALPWLRPDAKSQVTFQY--DDGKIVG--IDAVVLSTQHSEDINQKDLHEAVMEEIIKPVLPAEWITAHTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVEAFGTEKIPADQLTLLVREFF 334          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_YERPG (S-adenosylmethionine synthetase OS=Yersinia pestis bv. Antiqua (strain Angola) GN=metK PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 9.584e-50
Identity = 101/205 (49.27%), Postives = 134/205 (65.37%), Query Frame = 2
Query:    8 LMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            LMP  +  A +L  R  EVRKN   PWLRPD K+QVT +Y  + G +V   +  V++STQH E + ++ + E + E +IKPV+PA ++   T + +NP+GRFVIGGP GD GLTGRKII+DTY             KD +KVDRSAAY  R  AK++VA+GLA RC +QVSYAIGV EP S+ V+ +GT KI    +  L++E F
Sbjct:  134 LMPAPITYAHRLVERQAEVRKNGALPWLRPDAKSQVTFQY--DDGKIVG--IDAVVLSTQHSEDINQKDLHEAVMEEIIKPVLPAEWITAHTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVEAFGTEKIPADQLTLLVREFF 334          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_YERPE (S-adenosylmethionine synthetase OS=Yersinia pestis GN=metK PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 9.584e-50
Identity = 101/205 (49.27%), Postives = 134/205 (65.37%), Query Frame = 2
Query:    8 LMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            LMP  +  A +L  R  EVRKN   PWLRPD K+QVT +Y  + G +V   +  V++STQH E + ++ + E + E +IKPV+PA ++   T + +NP+GRFVIGGP GD GLTGRKII+DTY             KD +KVDRSAAY  R  AK++VA+GLA RC +QVSYAIGV EP S+ V+ +GT KI    +  L++E F
Sbjct:  134 LMPAPITYAHRLVERQAEVRKNGALPWLRPDAKSQVTFQY--DDGKIVG--IDAVVLSTQHSEDINQKDLHEAVMEEIIKPVLPAEWITAHTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVEAFGTEKIPADQLTLLVREFF 334          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_YERPB (S-adenosylmethionine synthetase OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) GN=metK PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 9.584e-50
Identity = 101/205 (49.27%), Postives = 134/205 (65.37%), Query Frame = 2
Query:    8 LMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            LMP  +  A +L  R  EVRKN   PWLRPD K+QVT +Y  + G +V   +  V++STQH E + ++ + E + E +IKPV+PA ++   T + +NP+GRFVIGGP GD GLTGRKII+DTY             KD +KVDRSAAY  R  AK++VA+GLA RC +QVSYAIGV EP S+ V+ +GT KI    +  L++E F
Sbjct:  134 LMPAPITYAHRLVERQAEVRKNGALPWLRPDAKSQVTFQY--DDGKIVG--IDAVVLSTQHSEDINQKDLHEAVMEEIIKPVLPAEWITAHTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVEAFGTEKIPADQLTLLVREFF 334          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_YERPA (S-adenosylmethionine synthetase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=metK PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 9.584e-50
Identity = 101/205 (49.27%), Postives = 134/205 (65.37%), Query Frame = 2
Query:    8 LMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            LMP  +  A +L  R  EVRKN   PWLRPD K+QVT +Y  + G +V   +  V++STQH E + ++ + E + E +IKPV+PA ++   T + +NP+GRFVIGGP GD GLTGRKII+DTY             KD +KVDRSAAY  R  AK++VA+GLA RC +QVSYAIGV EP S+ V+ +GT KI    +  L++E F
Sbjct:  134 LMPAPITYAHRLVERQAEVRKNGALPWLRPDAKSQVTFQY--DDGKIVG--IDAVVLSTQHSEDINQKDLHEAVMEEIIKPVLPAEWITAHTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVEAFGTEKIPADQLTLLVREFF 334          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_YERP3 (S-adenosylmethionine synthetase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=metK PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 9.584e-50
Identity = 101/205 (49.27%), Postives = 134/205 (65.37%), Query Frame = 2
Query:    8 LMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            LMP  +  A +L  R  EVRKN   PWLRPD K+QVT +Y  + G +V   +  V++STQH E + ++ + E + E +IKPV+PA ++   T + +NP+GRFVIGGP GD GLTGRKII+DTY             KD +KVDRSAAY  R  AK++VA+GLA RC +QVSYAIGV EP S+ V+ +GT KI    +  L++E F
Sbjct:  134 LMPAPITYAHRLVERQAEVRKNGALPWLRPDAKSQVTFQY--DDGKIVG--IDAVVLSTQHSEDINQKDLHEAVMEEIIKPVLPAEWITAHTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMVEAFGTEKIPADQLTLLVREFF 334          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_XYLFM (S-adenosylmethionine synthetase OS=Xylella fastidiosa (strain M12) GN=metK PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 9.584e-50
Identity = 99/206 (48.06%), Postives = 139/206 (67.48%), Query Frame = 2
Query:   11 MPLTLVLATKLGARLTEVRK--NKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            MP  + ++ +L  +  ++RK  N   PWLRPD K Q+T+ Y +     V   +  V++STQHD  + ++ + E ++E ++KPV+P+ +L + T FH+NP+G+FVIGGP GD GLTGRKII+DTY             KD +KVDRSA+Y VR  AK+VVA+GLA RC VQVSYAIGV EP+S+ V T+GTGK+ D  I  LI+++F
Sbjct:  135 MPAAIHISHRLVEQQAKIRKKSNSPLPWLRPDAKAQITLRYEDG----VASAIDAVVLSTQHDPGIKQKDLVEAVREEILKPVLPSKWLHKGTKFHINPTGKFVIGGPVGDCGLTGRKIIVDTYGGSARHGGGAFSGKDPSKVDRSASYAVRYVAKNVVAAGLADRCEVQVSYAIGVAEPISISVTTFGTGKVPDDKIEKLIRQHF 336          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_STRMK (S-adenosylmethionine synthetase OS=Stenotrophomonas maltophilia (strain K279a) GN=metK PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 9.584e-50
Identity = 104/206 (50.49%), Postives = 137/206 (66.50%), Query Frame = 2
Query:   11 MPLTLVLATKLGARLTEVRKNKTCP--WLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            MP  + L+ +L  +  ++RK K  P  WLRPD K+QVT+ Y N     V   +  V++STQH   + ++ + E ++E +IKPV+PA +L + T FH+NP+G+F IGGP GD GLTGRKII+DTY             KD +KVDRSAAY  R  AK+VVA+GLA RC VQVSYAIGV EP S+ V T+GTGKISD  I  LI+++F
Sbjct:  135 MPAAIHLSHRLVEQQAKIRKKKNSPLSWLRPDAKSQVTLRYENG----VVSAIDAVVLSTQHAPGIKQKDLIEAVREEIIKPVLPAKWLHKGTKFHINPTGKFEIGGPVGDCGLTGRKIIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLADRCEVQVSYAIGVAEPTSISVTTFGTGKISDDKIEKLIRKHF 336          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_STRM5 (S-adenosylmethionine synthetase OS=Stenotrophomonas maltophilia (strain R551-3) GN=metK PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 9.584e-50
Identity = 104/206 (50.49%), Postives = 137/206 (66.50%), Query Frame = 2
Query:   11 MPLTLVLATKLGARLTEVRKNKTCP--WLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            MP  + L+ +L  +  ++RK K  P  WLRPD K+QVT+ Y N     V   +  V++STQH   + ++ + E ++E +IKPV+PA +L + T FH+NP+G+F IGGP GD GLTGRKII+DTY             KD +KVDRSAAY  R  AK+VVA+GLA RC VQVSYAIGV EP S+ V T+GTGKISD  I  LI+++F
Sbjct:  135 MPAAIHLSHRLVEQQAKIRKKKNSPLSWLRPDAKSQVTLRYENG----VVSAIDAVVLSTQHAPGIKQKDLIEAVREEIIKPVLPAKWLHKGTKFHINPTGKFEIGGPVGDCGLTGRKIIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLADRCEVQVSYAIGVAEPTSISVTTFGTGKISDDKIEKLIRKHF 336          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_PSEPF (S-adenosylmethionine synthetase OS=Pseudomonas fluorescens (strain Pf0-1) GN=metK PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 9.584e-50
Identity = 101/205 (49.27%), Postives = 137/205 (66.83%), Query Frame = 2
Query:    8 LMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            LMP  +  + +L  R  E RK+   PWLRPD K+QVT  Y  EGG +V   +  V++STQH+  V+   + E + E ++K V+PA  L + T FH+NP+G+F+IGGP GD GLTGRKII+D+Y             KD +KVDRSAAY  R  AK++VA+GLA RC +QVSYAIGV +P S+ ++T+GTGKISD  I+ L++E F
Sbjct:  135 LMPAPITFSHQLVQRQAEARKSGLLPWLRPDAKSQVTCRY--EGGKVVG--IDAVVLSTQHNPEVSYNDLREGVMELIVKHVLPAELLSKDTQFHINPTGQFIIGGPVGDCGLTGRKIIVDSYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAERCEIQVSYAIGVAQPTSISLNTFGTGKISDDKIIKLVREVF 335          
The following BLAST results are available for this feature:
BLAST of DR403404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_YERPN9.584e-5049.27S-adenosylmethionine synthetase OS=Yersinia pestis... [more]
METK_YERPG9.584e-5049.27S-adenosylmethionine synthetase OS=Yersinia pestis... [more]
METK_YERPE9.584e-5049.27S-adenosylmethionine synthetase OS=Yersinia pestis... [more]
METK_YERPB9.584e-5049.27S-adenosylmethionine synthetase OS=Yersinia pseudo... [more]
METK_YERPA9.584e-5049.27S-adenosylmethionine synthetase OS=Yersinia pestis... [more]
METK_YERP39.584e-5049.27S-adenosylmethionine synthetase OS=Yersinia pseudo... [more]
METK_XYLFM9.584e-5048.06S-adenosylmethionine synthetase OS=Xylella fastidi... [more]
METK_STRMK9.584e-5050.49S-adenosylmethionine synthetase OS=Stenotrophomona... [more]
METK_STRM59.584e-5050.49S-adenosylmethionine synthetase OS=Stenotrophomona... [more]
METK_PSEPF9.584e-5049.27S-adenosylmethionine synthetase OS=Pseudomonas flu... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244O13 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244O13 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403404 ID=DR403404; Name=DR403404; organism=Citrus sinensis; type=EST; length=624bp
ACCTGAGCTAATGCCGCTGACTCTCGTTCTTGCCACCAAGCTTGGAGCCA
GACTTACTGAGGTGAGAAAGAATAAGACATGCCCCTGGCTGAGGCCGGAT
GGAAAAACCCAGGTGACTGTTGAGTACCGGAACGAAGGTGGAGCCATGGT
CCCACAGAGGGTCCACACTGTTCTCATTTCAACCCAGCACGATGAAACTG
TCACCAAGGAGCAGATTTCTGAGGACCTGAAGGAGCATGTGATTAAACCA
GTCATTCCGGCACATTTCCTTGATGAAAGGACAATCTTCCACCTCAACCC
CTCTGGTCGTTTTGTCATTGGCGGGCCACATGGGGATGCAGGGCTTACCG
GTAGGAAGATCATCATTGATACTTATGGTGGTTGGGGTGCTCATGGTGGC
GGTGCCTTCTCTGGCAAGGATTCTACAAAGGTCGATCGAAGTGCTGCATA
TATTGTCAGGCAGGCTGCAAAGAGTGTGGTGGCTTCTGGGCTTGCCCGTC
GCTGTCTTGTCCAGGTCTCTTATGCCATTGGTGTGCCAGAACCGCTGTCT
GTGTTTGTGGACACTTATGGTACAGGAAAGATTTCAGATAAGGATATACT
GGCTCTAATTAAGGAGAACTTTGA
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