DR403404

Overview
NameDR403404
Unique NameDR403404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length624
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_PSEF5 (S-adenosylmethionine synthetase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=metK PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 9.584e-50
Identity = 101/205 (49.27%), Postives = 137/205 (66.83%), Query Frame = 2
Query:    8 LMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            LMP  +  + +L  R  E RK+   PWLRPD K+QVT  Y  EGG +V   +  V++STQH+  V+   + E + E ++K V+PA  L + T FH+NP+G+F+IGGP GD GLTGRKII+D+Y             KD +KVDRSAAY  R  AK++VA+GLA RC +QVSYAIGV +P S+ ++T+GTGKISD  I+ L++E F
Sbjct:  135 LMPAPITFSHQLVQRQAEARKSGLLPWLRPDAKSQVTCRY--EGGKVVG--IDAVVLSTQHNPEVSYSDLREGVMELIVKHVLPAELLSKDTQFHINPTGQFIIGGPVGDCGLTGRKIIVDSYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAERCEIQVSYAIGVAQPTSISLNTFGTGKISDDKIIKLVREVF 335          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_PROMA (S-adenosylmethionine synthetase OS=Prochlorococcus marinus GN=metK PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 9.584e-50
Identity = 110/218 (50.46%), Postives = 142/218 (65.14%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVT--------KEQISEDLKEHVIKPV---IPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMPL + LA +L  RL +VR + T  +L PDGKTQV+V Y N      P  + T+LISTQH   V         +EQIS+DL E V+KP    +P   + E+T F +NP+G+FV+GGP GDAGLTGRKII+DTY             KD TKVDRSAAY  R  AKS+VA+GLA R  VQ+SYAIGV  P+S+ V+ +G+GK+S++ +  L+ ENF
Sbjct:  139 PELMPLPISLAHRLSRRLAKVRHDGTLKYLLPDGKTQVSVLYENNK----PTAIDTILISTQHTAEVEGITSEKGIREQISKDLWELVVKPATEDLPIKPIQEKTRFLVNPTGKFVVGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARFVAKSLVAAGLASRVEVQLSYAIGVANPVSILVEAFGSGKMSNEALTELVTENF 352          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_JANMA (S-adenosylmethionine synthetase OS=Janthinobacterium sp. (strain Marseille) GN=metK PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 9.584e-50
Identity = 104/207 (50.24%), Postives = 138/207 (66.67%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMP  +  A ++  R +E+RK+   PWLRPD K+QVT+ Y +      P  + T+++STQH   +  + I E + E +IKPV+PA +L + T F +NP+GRFVIGGP GD GLTGRKII+DTY             KD +KVDRSAAY  R  AK++VA+GLA R  +Q+SYAIGV +P SV V T+GTGKISD+ I  L+ E+F
Sbjct:  135 PELMPAAIHYAHRIVERQSELRKDGRLPWLRPDAKSQVTLRYVDGR----PVSIDTIVLSTQHAPEMQHKDIEEAVIESIIKPVVPAEWLKD-TRFLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAERAQIQISYAIGVAKPTSVMVTTFGTGKISDEKIAQLVLEHF 336          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_HERAR (S-adenosylmethionine synthetase OS=Herminiimonas arsenicoxydans GN=metK PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 9.584e-50
Identity = 104/207 (50.24%), Postives = 138/207 (66.67%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            PELMP  +  A ++  R +E+RK+   PWLRPD K+QVT+ Y +      P  + T+++STQH   +  + I E + E +IKPV+PA +L + T F +NP+GRFVIGGP GD GLTGRKII+DTY             KD +KVDRSAAY  R  AK++VA+GLA R  +Q+SYAIGV +P SV V T+GTGKISD+ I  L+ E+F
Sbjct:  135 PELMPAAIHYAHRIVERQSELRKDGRLPWLRPDAKSQVTLRYVDGR----PVSIDTIVLSTQHAPEMQHKDIEEAVIESIIKPVVPAEWLKD-TRFLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGAAPHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAERAQIQISYAIGVAKPTSVMVTTFGTGKISDEKIAQLVLEHF 336          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_HAES2 (S-adenosylmethionine synthetase OS=Haemophilus somnus (strain 2336) GN=metK PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 9.584e-50
Identity = 99/205 (48.29%), Postives = 139/205 (67.80%), Query Frame = 2
Query:    8 LMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            LMP  +  A +L  R  +VRK     WLRPD K+QVT++Y  E   +V   +  V++STQH + V ++ + E + E +IKP++PA +L + T + +NP+GRFVIGGP GD GLTGRKII+DTY             KD +KVDRSAAY  R  AK++VA+GLA RC +Q+SYAIGV EP S+ V+T+GTGK++++ ++ LI+E F
Sbjct:  134 LMPAAITYAHRLMERQAQVRKKGILDWLRPDAKSQVTLKY--EDNRIVG--IDAVVLSTQHSDNVDQKTVHEGVMEEIIKPILPAEWLSKETKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGVAEPTSIMVETFGTGKVANELLVGLIREFF 334          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_HAES1 (S-adenosylmethionine synthetase OS=Haemophilus somnus (strain 129Pt) GN=metK PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 9.584e-50
Identity = 99/205 (48.29%), Postives = 139/205 (67.80%), Query Frame = 2
Query:    8 LMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            LMP  +  A +L  R  +VRK     WLRPD K+QVT++Y  E   +V   +  V++STQH + V ++ + E + E +IKP++PA +L + T + +NP+GRFVIGGP GD GLTGRKII+DTY             KD +KVDRSAAY  R  AK++VA+GLA RC +Q+SYAIGV EP S+ V+T+GTGK++++ ++ LI+E F
Sbjct:  134 LMPAAITYAHRLMERQAQVRKKGILDWLRPDAKSQVTLKY--EDNRIVG--IDAVVLSTQHSDNVDQKTVHEGVMEEIIKPILPAEWLSKETKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGVAEPTSIMVETFGTGKVANELLVGLIREFF 334          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_COXBN (S-adenosylmethionine synthetase OS=Coxiella burnetii (strain Dugway 5J108-111) GN=metK PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 9.584e-50
Identity = 100/204 (49.02%), Postives = 132/204 (64.71%), Query Frame = 2
Query:   11 MPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            MP  +  A +L  +   +RKN   PWLRPD K+QVT+ Y N      P     +++STQH   +++E + E + + +IKP++P H+LD+ T F +NP+GRFVIGGP GD GLTGRKII+DTY             KD +KVDRS AY  R  AK++VA GLA RC +QVSYAIGV EP S+ V+T+GTGKI +     LIKE+F
Sbjct:  136 MPAPITYAHRLVRQQALLRKNGRLPWLRPDAKSQVTLRYENGK----PVAADCIVLSTQHSPEISQESLREAVIDEIIKPIMPPHWLDKHTRFLVNPTGRFVIGGPVGDCGLTGRKIIVDTYGGMARHGGGCFSGKDPSKVDRSGAYAARYVAKNIVAGGLADRCEIQVSYAIGVAEPTSISVETFGTGKIDEVRTQQLIKEHF 335          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_BORPE (S-adenosylmethionine synthetase OS=Bordetella pertussis GN=metK PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 9.584e-50
Identity = 104/207 (50.24%), Postives = 135/207 (65.22%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            P+LMP  +  A +L  R +E+RK+   PWLRPD K+QVT  Y +      P  V TV++STQH   +++  I E + E +IKP  P   +  +T F +NP+GRFVIGGP GD GLTGRKII+DTY             KD +KVDRSAAY  R  AK+VVA+GLAR+C VQVSYAIGV EP+++ V T GTG I D+ I  L++E+F
Sbjct:  136 PDLMPAPIWYAHRLVQRQSELRKDGRLPWLRPDAKSQVTFRYVDGR----PAEVDTVVLSTQHSPEISQASIREAVIEDIIKPSFPEGLITPKTKFLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGACPHGGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLARQCQVQVSYAIGVAEPINITVYTEGTGVIPDEQIAKLVREHF 338          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_BORPD (S-adenosylmethionine synthetase OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=metK PE=3 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 9.584e-50
Identity = 105/207 (50.72%), Postives = 135/207 (65.22%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            P+LMP  +  A +L  R +E+RK+   PWLRPD K+QVT  Y +      P  V TV++STQH   +++  I E + E +IKP  P   +  RT F +NP+GRFVIGGP GD GLTGRKII+DTY             KD +KVDRSAAY  R  AK+VVA+GLAR+C VQVSYAIGV EP+++ V T GTG I D+ I  L++E+F
Sbjct:  136 PDLMPAPIWYAHRLVQRQSELRKDGRLPWLRPDAKSQVTFRYVDGR----PVEVDTVVLSTQHAPEISQSAIHEAVIEDIIKPSFPEGLITPRTKFLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGACPHGGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLARQCQVQVSYAIGVAEPINITVYTEGTGVIPDEQIAKLVREHF 338          
BLAST of DR403404 vs. ExPASy Swiss-Prot
Match: METK_BORPA (S-adenosylmethionine synthetase OS=Bordetella parapertussis GN=metK PE=3 SV=2)

HSP 1 Score: 196.438 bits (498), Expect = 9.584e-50
Identity = 104/207 (50.24%), Postives = 135/207 (65.22%), Query Frame = 2
Query:    2 PELMPLTLVLATKLGARLTEVRKNKTCPWLRPDGKTQVTVEYRNEGGAMVPQRVHTVLISTQHDETVTKEQISEDLKEHVIKPVIPAHFLDERTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXXKDSTKVDRSAAYIVRQAAKSVVASGLARRCLVQVSYAIGVPEPLSVFVDTYGTGKISDKDILALIKENF 622
            P+LMP  +  A +L  R +E+RK+   PWLRPD K+QVT  Y +      P  V TV++STQH   +++  I E + E +IKP  P   +  +T F +NP+GRFVIGGP GD GLTGRKII+DTY             KD +KVDRSAAY  R  AK+VVA+GLAR+C VQVSYAIGV EP+++ V T GTG I D+ I  L++E+F
Sbjct:  136 PDLMPAPIWYAHRLVQRQSELRKDGRLPWLRPDAKSQVTFRYVDGR----PAEVDTVVLSTQHSPEISQASIREAVIEDIIKPSFPEGLITPKTKFLVNPTGRFVIGGPQGDCGLTGRKIIVDTYGGACPHGGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLARQCQVQVSYAIGVAEPINITVYTEGTGVIPDEQIAKLVREHF 338          
The following BLAST results are available for this feature:
BLAST of DR403404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_PSEF59.584e-5049.27S-adenosylmethionine synthetase OS=Pseudomonas flu... [more]
METK_PROMA9.584e-5050.46S-adenosylmethionine synthetase OS=Prochlorococcus... [more]
METK_JANMA9.584e-5050.24S-adenosylmethionine synthetase OS=Janthinobacteri... [more]
METK_HERAR9.584e-5050.24S-adenosylmethionine synthetase OS=Herminiimonas a... [more]
METK_HAES29.584e-5048.29S-adenosylmethionine synthetase OS=Haemophilus som... [more]
METK_HAES19.584e-5048.29S-adenosylmethionine synthetase OS=Haemophilus som... [more]
METK_COXBN9.584e-5049.02S-adenosylmethionine synthetase OS=Coxiella burnet... [more]
METK_BORPE9.584e-5050.24S-adenosylmethionine synthetase OS=Bordetella pert... [more]
METK_BORPD9.584e-5050.72S-adenosylmethionine synthetase OS=Bordetella petr... [more]
METK_BORPA9.584e-5050.24S-adenosylmethionine synthetase OS=Bordetella para... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244O13 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244O13 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403404 ID=DR403404; Name=DR403404; organism=Citrus sinensis; type=EST; length=624bp
ACCTGAGCTAATGCCGCTGACTCTCGTTCTTGCCACCAAGCTTGGAGCCA
GACTTACTGAGGTGAGAAAGAATAAGACATGCCCCTGGCTGAGGCCGGAT
GGAAAAACCCAGGTGACTGTTGAGTACCGGAACGAAGGTGGAGCCATGGT
CCCACAGAGGGTCCACACTGTTCTCATTTCAACCCAGCACGATGAAACTG
TCACCAAGGAGCAGATTTCTGAGGACCTGAAGGAGCATGTGATTAAACCA
GTCATTCCGGCACATTTCCTTGATGAAAGGACAATCTTCCACCTCAACCC
CTCTGGTCGTTTTGTCATTGGCGGGCCACATGGGGATGCAGGGCTTACCG
GTAGGAAGATCATCATTGATACTTATGGTGGTTGGGGTGCTCATGGTGGC
GGTGCCTTCTCTGGCAAGGATTCTACAAAGGTCGATCGAAGTGCTGCATA
TATTGTCAGGCAGGCTGCAAAGAGTGTGGTGGCTTCTGGGCTTGCCCGTC
GCTGTCTTGTCCAGGTCTCTTATGCCATTGGTGTGCCAGAACCGCTGTCT
GTGTTTGTGGACACTTATGGTACAGGAAAGATTTCAGATAAGGATATACT
GGCTCTAATTAAGGAGAACTTTGA
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