DR403392
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR403392 vs. ExPASy Swiss-Prot
Match: PRS6B_DICDI (26S protease regulatory subunit 6B homolog OS=Dictyostelium discoideum GN=psmC4 PE=1 SV=1) HSP 1 Score: 280.411 bits (716), Expect = 6.901e-75 Identity = 142/182 (78.02%), Postives = 158/182 (86.81%), Query Frame = 2 Query: 191 EDDLYSRLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKA 736 E DLY ++KSL+ +L+F +IQEEY+K E KNLKRELL AQEEVKRI+SVPL+IGQ +EMVD N GIV ST+GS VRILSTI+RELLKPSASVAL RHSNALVD LPPE+DSSI LL EKP +Y+DIGG DIQKQE+REAVELPLTHH LYKQIGIDPPRGVLLYGPPGTGKTMLAKA Sbjct: 22 EADLYQKMKSLESKLDFFNIQEEYIKYEYKNLKRELLHAQEEVKRIRSVPLLIGQLLEMVDSNTGIVQSTSGSTLCVRILSTIDRELLKPSASVALQRHSNALVDTLPPESDSSIHLLGADEKPSESYSDIGGGDIQKQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKTMLAKA 203
BLAST of DR403392 vs. ExPASy Swiss-Prot
Match: PRS6B_YEAST (26S protease regulatory subunit 6B homolog OS=Saccharomyces cerevisiae GN=RPT3 PE=1 SV=1) HSP 1 Score: 280.026 bits (715), Expect = 9.013e-75 Identity = 134/180 (74.44%), Postives = 161/180 (89.44%), Query Frame = 2 Query: 197 DLYSRLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKA 736 D+Y +LK L+++ E + +QE+Y+KDEQ++LKREL RAQEEVKRIQSVPLVIGQF+E +DQN GIV STTG +Y VRILST++RELLKPS SVALHRHSNALVD+LPP++DSSIS++ ++EKPDVTY D+GG D+QKQEIREAVELPL +LY+QIGIDPPRGVLLYGPPGTGKTML KA Sbjct: 46 DIYFKLKKLEKEYELLTLQEDYIKDEQRHLKRELKRAQEEVKRIQSVPLVIGQFLEPIDQNTGIVSSTTGMSYVVRILSTLDRELLKPSMSVALHRHSNALVDILPPDSDSSISVMGENEKPDVTYADVGGLDMQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKA 225
BLAST of DR403392 vs. ExPASy Swiss-Prot
Match: PRS6B_CAEEL (Probable 26S protease regulatory subunit 6B OS=Caenorhabditis elegans GN=rpt-3 PE=2 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 3.425e-74 Identity = 137/196 (69.90%), Postives = 164/196 (83.67%), Query Frame = 2 Query: 149 PPPTRSDLTEQWSDEDDLYSRLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKA 736 PPP + + SD+ Y +L +L+RQL + + E+Y+K E +NL++ELL AQEEVKRIQSVPLVIGQF+E VDQN+ IVGSTTGSNYYVR+LS ++RELLKP SVALH++SNALVDVLPPEADSSI +L EKPD++Y DIGG D+QKQE+REAVELPLTH ELY+QIGIDPPRGVL+YGPPG GKTMLAKA Sbjct: 22 PPPLPATCVDVSSDD---YIKLTTLERQLAHLQVMEDYIKLETRNLEKELLHAQEEVKRIQSVPLVIGQFLEAVDQNHAIVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKA 214
BLAST of DR403392 vs. ExPASy Swiss-Prot
Match: PRS6B_ENCCU (26S protease regulatory subunit 6B homolog OS=Encephalitozoon cuniculi GN=ECU08_1970 PE=1 SV=1) HSP 1 Score: 237.654 bits (605), Expect = 5.130e-62 Identity = 111/179 (62.01%), Postives = 147/179 (82.12%), Query Frame = 2 Query: 200 LYSRLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKA 736 L+ R K ++R+L ++I+E YV+ E + LKRE ++EE+ R++SVPL++GQF+E +D + IVGST GSN+ VRILST++RELLKP+ +VALHRHS+A+V VLPPE DS+I ++ +SEKP VTY D+GG D+QKQEI+E VELPL +LY+QIGIDPP+GVLLYGPPGTGKTML KA Sbjct: 9 LFVRYKQMERKLRLLEIREGYVRKEIETLKREERHSREELDRVKSVPLIMGQFLEPIDSSTAIVGSTAGSNFVVRILSTVDRELLKPNTTVALHRHSSAIVGVLPPEVDSTIPVMGESEKPSVTYGDVGGLDVQKQEIKETVELPLLQSDLYRQIGIDPPQGVLLYGPPGTGKTMLVKA 187
BLAST of DR403392 vs. ExPASy Swiss-Prot
Match: PSMR_ARCFU (Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus GN=pan PE=1 SV=1) HSP 1 Score: 164.466 bits (415), Expect = 5.519e-40 Identity = 84/189 (44.44%), Postives = 128/189 (67.72%), Query Frame = 2 Query: 170 LTEQWSDEDDLYSRLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKA 736 L E+ ++ Y +L+ L R+LE ++++++ E+ +RE+ R + EV+R++S PL++G ++++ +V S+TG + V IN E LKP A VAL++ + A+V+VLP D + EKP+V+Y DIGG D+Q +EIREAVELPL EL+ ++GI+PP+GVLLYGPPGTGKT+LAKA Sbjct: 9 LLEKLKKLEEDYYKLRELYRRLED---EKKFIESERIRYEREVRRLRSEVERLRSPPLLVGVVSDILEDGRVVVKSSTGPKFVVNTSQYINEEELKPGARVALNQQTLAIVNVLPTSKDPMVYGFEVEEKPEVSYEDIGGLDVQIEEIREAVELPLLKPELFAEVGIEPPKGVLLYGPPGTGKTLLAKA 194
BLAST of DR403392 vs. ExPASy Swiss-Prot
Match: PSMR_THEON (Proteasome-activating nucleotidase OS=Thermococcus onnurineus (strain NA1) GN=pan PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 9.414e-40 Identity = 85/181 (46.96%), Postives = 121/181 (66.85%), Query Frame = 2 Query: 194 DDLYSRLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKA 736 DD LK RQLE +Q ++ +++ L+REL R + E+ R++ P G +E++D++ IV + G + VRI I RE LKP A VAL + + A+V++LP E D S+ E+P V+YNDIGG D Q QE+REA+ELPL H EL++++GI+PP+GVLLYGPPG GKT++AKA Sbjct: 15 DDYIMYLKKRIRQLE---LQVRTLEADKERLERELSRLRMEMSRLRQPPAFAGTLIELLDEDRAIVQNYNGPRFVVRIAPWIERENLKPGARVALDQRTMAIVELLPSEKDPSVLGFEVIERPTVSYNDIGGLDKQLQELREAIELPLKHPELFEKVGIEPPKGVLLYGPPGCGKTLMAKA 192
BLAST of DR403392 vs. ExPASy Swiss-Prot
Match: PSMR_PYRKO (Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis GN=pan PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 1.606e-39 Identity = 85/181 (46.96%), Postives = 120/181 (66.30%), Query Frame = 2 Query: 194 DDLYSRLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKA 736 DD + LK RQLE +Q ++ +++ L+REL R + E+ R++ P G +E++D IV + G + VRI I R+ LKP A VAL + + A+V++LP E D S+ E+P VTYNDIGG + Q QE+REA+ELPL H EL++Q+GI+PP+GVLLYGPPG GKT++AKA Sbjct: 14 DDYVTFLKRRIRQLE---LQVRTLEADKERLERELSRLRMEMSRLRQPPAFAGNVIEVLDDERAIVQNYNGPRFVVRIAPWIERDKLKPGARVALDQRTMAIVELLPSEKDPSVLGFEVIERPKVTYNDIGGLEKQLQELREAIELPLKHPELFEQVGIEPPKGVLLYGPPGCGKTLMAKA 191
BLAST of DR403392 vs. ExPASy Swiss-Prot
Match: PRS4_RAT (26S protease regulatory subunit 4 OS=Rattus norvegicus GN=Psmc1 PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.577e-39 Identity = 84/219 (38.36%), Postives = 137/219 (62.56%), Query Frame = 2 Query: 125 DPKPVSEPPPPTRSDLTEQWSDEDDLYSRLK-------------SLQRQLEFIDIQEEYVKDEQ--KNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKA 736 D K EPP PTR ++ + D S+L L+R +++ ++EE++++++ K L+ + + +V ++ P+ +G E++D N+ IV ++ GS +YV ILS ++++LL+P SV L+ +A++ VL + D ++++ + P TY DIGG D Q QEI+E+VELPLTH E Y+++GI PP+GV+LYGPPGTGKT+LAKA Sbjct: 20 DKKKKYEPPVPTRVGKKKKKTKGPDAASKLPLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKA 238
BLAST of DR403392 vs. ExPASy Swiss-Prot
Match: PRS4_MOUSE (26S protease regulatory subunit 4 OS=Mus musculus GN=Psmc1 PE=1 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.577e-39 Identity = 84/219 (38.36%), Postives = 137/219 (62.56%), Query Frame = 2 Query: 125 DPKPVSEPPPPTRSDLTEQWSDEDDLYSRLK-------------SLQRQLEFIDIQEEYVKDEQ--KNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKA 736 D K EPP PTR ++ + D S+L L+R +++ ++EE++++++ K L+ + + +V ++ P+ +G E++D N+ IV ++ GS +YV ILS ++++LL+P SV L+ +A++ VL + D ++++ + P TY DIGG D Q QEI+E+VELPLTH E Y+++GI PP+GV+LYGPPGTGKT+LAKA Sbjct: 20 DKKKKYEPPVPTRVGKKKKKTKGPDAASKLPLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKA 238
BLAST of DR403392 vs. ExPASy Swiss-Prot
Match: PRS4_HUMAN (26S protease regulatory subunit 4 OS=Homo sapiens GN=PSMC1 PE=1 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 3.577e-39 Identity = 84/219 (38.36%), Postives = 137/219 (62.56%), Query Frame = 2 Query: 125 DPKPVSEPPPPTRSDLTEQWSDEDDLYSRLK-------------SLQRQLEFIDIQEEYVKDEQ--KNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKA 736 D K EPP PTR ++ + D S+L L+R +++ ++EE++++++ K L+ + + +V ++ P+ +G E++D N+ IV ++ GS +YV ILS ++++LL+P SV L+ +A++ VL + D ++++ + P TY DIGG D Q QEI+E+VELPLTH E Y+++GI PP+GV+LYGPPGTGKT+LAKA Sbjct: 20 DKKKKYEPPVPTRVGKKKKKTKGPDAASKLPLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKA 238 The following BLAST results are available for this feature:
BLAST of DR403392 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 160
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403392 ID=DR403392; Name=DR403392; organism=Citrus sinensis; type=EST; length=738bpback to top |