DR403392
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR403392 vs. ExPASy Swiss-Prot
Match: PSMR_PYRHO (Proteasome-activating nucleotidase OS=Pyrococcus horikoshii GN=pan PE=3 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.672e-39 Identity = 82/183 (44.81%), Postives = 122/183 (66.67%), Query Frame = 2 Query: 188 DEDDLYSRLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKA 736 D DD + LK RQLE +Q ++ +++ L+REL R + E+ R++ P G +E++D++ IV + G + VRI I+R+ L+P VAL + + A+V++LP D ++ E+P+VTYNDIGG Q QE+REA+ELPL H EL++++GIDPP+GVLLYGPPG GKT++AKA Sbjct: 14 DYDDYITYLKRRIRQLE---LQVRMLEADKERLERELSRLRSEMSRLRQPPAFAGTVIEVLDEDRAIVQNYNGPRFVVRIAPWIDRKKLRPGTRVALDQRTMAVVEILPTSKDPTVLGFEVIERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKA 193
BLAST of DR403392 vs. ExPASy Swiss-Prot
Match: PRS4_CHICK (26S protease regulatory subunit 4 OS=Gallus gallus GN=PSMC1 PE=2 SV=1) HSP 1 Score: 161.384 bits (407), Expect = 4.672e-39 Identity = 84/219 (38.36%), Postives = 137/219 (62.56%), Query Frame = 2 Query: 125 DPKPVSEPPPPTRSDLTEQWSDEDDLYSR-------------LKSLQRQLEFIDIQEEYVKDEQ--KNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKA 736 D K EPP PTR ++ + D S+ L L+R +++ ++EE++++++ K L+ + + +V ++ P+ +G E++D N+ IV ++ GS +YV ILS ++++LL+P SV L+ +A++ VL + D ++++ + P TY DIGG D Q QEI+E+VELPLTH E Y+++GI PP+GV+LYGPPGTGKT+LAKA Sbjct: 20 DKKKKYEPPVPTRVGKKKKKTKGPDAASKPPLVTPHTQCRLKLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKLEKAPQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKA 238
BLAST of DR403392 vs. ExPASy Swiss-Prot
Match: PSMR_PYRAB (Proteasome-activating nucleotidase OS=Pyrococcus abyssi GN=pan PE=3 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.359e-38 Identity = 81/181 (44.75%), Postives = 120/181 (66.30%), Query Frame = 2 Query: 194 DDLYSRLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKA 736 DD + LK RQLE +Q ++ +++ L+REL R + E+ R++ P G +E++D + IV + G + VRI I R+ L+P A VAL + + A++++LP D ++ E+P+VTYNDIGG Q QE+REA+ELPL H EL++++GIDPP+GVLLYGPPG GKT++AKA Sbjct: 16 DDYITYLKRRIRQLE---LQVRMLEADKERLERELSRLRSEMSRLRQPPAFAGTVIEVLDDDRAIVQNYNGPRFVVRIAPWIERDKLRPGARVALDQRTMAIIELLPSSKDPTVLGFEVIERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKA 193
BLAST of DR403392 vs. ExPASy Swiss-Prot
Match: PRS4_SCHPO (26S protease regulatory subunit 4 homolog OS=Schizosaccharomyces pombe GN=mts2 PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 3.028e-38 Identity = 89/219 (40.64%), Postives = 137/219 (62.56%), Query Frame = 2 Query: 131 KPVSEPPPPTRSDLTEQWSDEDDLYS--------------RLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSV---PLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKA 736 KP EPP PTR+ ++ + S RL +QR + + ++EEYV+++++ LK + R QEE R+ + P+ +G E++D ++ IV ST G YYV I+S +++++L+P SV LH + ++V +L + D I+++ + P +Y DIGG + Q QEI+EAVELPLTH ELY+++GI PP+GV+LYG PGTGKT+LAKA Sbjct: 28 KPKYEPPVPTRTGRRKKKAQSGPDASAKLPTVIPTTRCRLRLLKMQRIHDHLLMEEEYVQNQER-LKPQDERTQEERNRVDEIRGTPMSVGTLEEIIDDDHAIV-STAGPEYYVSIMSFVDKDMLEPGCSVLLHHKAMSIVGLLLDDTDPMINVMKLDKAPTESYADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKA 244
BLAST of DR403392 vs. ExPASy Swiss-Prot
Match: PSMR_PYRFU (Proteasome-activating nucleotidase OS=Pyrococcus furiosus GN=pan PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 5.166e-38 Identity = 79/181 (43.65%), Postives = 119/181 (65.75%), Query Frame = 2 Query: 194 DDLYSRLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKA 736 DD + LK RQLE +Q ++ +++ L+REL R + E+ R++ P G +E++D + IV + G + VRI I++ L+P VAL + + A++++LP D ++ E+P+VTYNDIGG Q QE+REA+ELPL H EL++++GIDPP+GVLLYGPPG GKT++AKA Sbjct: 13 DDYVTYLKRRIRQLE---LQVRMLEADKERLERELSRLRSEMSRLRQPPAFAGSVIEVLDDDRAIVQNYNGPRFVVRIAPWIDKSKLRPGTRVALDQRTMAIIEILPASKDPAVLGFEVVERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKA 190
BLAST of DR403392 vs. ExPASy Swiss-Prot
Match: PRS4_DROME (26S protease regulatory subunit 4 OS=Drosophila melanogaster GN=Pros26.4 PE=1 SV=2) HSP 1 Score: 157.918 bits (398), Expect = 5.166e-38 Identity = 84/220 (38.18%), Postives = 137/220 (62.27%), Query Frame = 2 Query: 125 DPKPVSEPPPPTRSDLTEQWSDEDDLYSRLKS-------------LQRQLEFIDIQEEYVKDEQKNLKRELLRAQEE---VKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKA 736 D K EPP PTR ++ + D +L L+R +++ +++E+++++++ LK + + +EE V ++ P+ +G E++D N+ IV ++ GS +YV ILS ++++ L+P SV L+ +A+V VL + D ++++ + P TY DIGG D Q QEI+E+VELPLTH E Y+++GI PP+GV+LYGPPGTGKT+LAKA Sbjct: 19 DKKKKYEPPIPTRVGKKKRRAKGPDAAMKLPQVTPHTRCRLKLLKLERIKDYLMMEDEFIRNQER-LKPQDEKNEEERSKVDDLRGTPMSVGNLEEIIDDNHAIVSTSVGSEHYVSILSFVDKDQLEPGCSVLLNHKVHAVVGVLSDDTDPMVTVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKA 237
BLAST of DR403392 vs. ExPASy Swiss-Prot
Match: PSMR_METKA (Proteasome-activating nucleotidase OS=Methanopyrus kandleri GN=pan PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 6.747e-38 Identity = 76/176 (43.18%), Postives = 122/176 (69.32%), Query Frame = 2 Query: 209 RLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKA 736 R K+L+++LE ++ +++E + + + + + +++R++ PL++G E++D IV S+TG + + T++R L+P A+VAL++ S A+VDVLP E DS + + E PDV+Y+DIGG D Q +EIRE VE PL EL++++G++PP+GVLLYGPPGTGKT+LAKA Sbjct: 57 RRKTLEKELEMERDEKAELREELRRKEVMIEKLRSDLQRMKKPPLIVGTVEEILDDGRVIVKSSTGPKFVSNVSPTVDRNELEPGANVALNQQSMAVVDVLPSEKDSRVLAMEVDESPDVSYDDIGGLDEQIREIREVVEKPLKEPELFEKVGVEPPKGVLLYGPPGTGKTLLAKA 232
BLAST of DR403392 vs. ExPASy Swiss-Prot
Match: PSMR_THEGJ (Proteasome-activating nucleotidase OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=pan PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.503e-37 Identity = 77/172 (44.77%), Postives = 117/172 (68.02%), Query Frame = 2 Query: 221 LQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKA 736 L+R++ +++Q ++ +++ L+REL R + E+ R++ P G +E++D + IV + G + VRI I R+ LKP + VAL + + A+V++LP E D S+ EKP VTY DIGG + Q E+REAVELPL H EL++++GI+PP+GVLLYGPPG GKT++AKA Sbjct: 20 LKRRIRQLELQVRTLEADKERLERELSRLRTEMSRLRQPPAFAGTVIEVLDDDRAIVQNYNGPRFVVRIAPWIERDKLKPGSRVALDQRTMAIVELLPTEKDPSVLGFEVIEKPRVTYQDIGGLERQLAELREAVELPLKHPELFEKVGIEPPKGVLLYGPPGCGKTLMAKA 191
BLAST of DR403392 vs. ExPASy Swiss-Prot
Match: PRS4B_ARATH (26S proteasome regulatory subunit 4 homolog B OS=Arabidopsis thaliana GN=RPT2B PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.503e-37 Identity = 78/179 (43.58%), Postives = 123/179 (68.72%), Query Frame = 2 Query: 209 RLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEE---VKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKA 736 RL L+R +++ ++EE+V ++++ LK + +A+E+ V ++ P+ +G E++D+N+ IV S+ G YYV ILS ++++ L+P S+ +H ++V +L E D +S++ + P +Y DIGG + Q QEI+EAVELPLTH ELY+ IGI PP+GV+LYG PGTGKT+LAKA Sbjct: 64 RLLKLERIKDYLLMEEEFVANQER-LKPQEEKAEEDRSKVDDLRGTPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKA 241
BLAST of DR403392 vs. ExPASy Swiss-Prot
Match: PRS4A_ARATH (26S proteasome regulatory subunit 4 homolog A OS=Arabidopsis thaliana GN=RPT2A PE=2 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.503e-37 Identity = 78/179 (43.58%), Postives = 123/179 (68.72%), Query Frame = 2 Query: 209 RLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEE---VKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKA 736 RL L+R +++ ++EE+V ++++ LK + +A+E+ V ++ P+ +G E++D+N+ IV S+ G YYV ILS ++++ L+P S+ +H ++V +L E D +S++ + P +Y DIGG + Q QEI+EAVELPLTH ELY+ IGI PP+GV+LYG PGTGKT+LAKA Sbjct: 64 RLLKLERIKDYLLMEEEFVANQER-LKPQEEKAEEDRSKVDDLRGTPMSVGNLEELIDENHAIVSSSVGPEYYVGILSFVDKDQLEPGCSILMHNKVLSVVGILQDEVDPMVSVMKVEKAPLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKA 241 The following BLAST results are available for this feature:
BLAST of DR403392 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 160
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403392 ID=DR403392; Name=DR403392; organism=Citrus sinensis; type=EST; length=738bpback to top |