DR403392
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR403392 vs. ExPASy Swiss-Prot
Match: PS6AA_ARATH (26S protease regulatory subunit 6A homolog A OS=Arabidopsis thaliana GN=RPT5A PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.194e-26 Identity = 60/202 (29.70%), Postives = 111/202 (54.95%), Query Frame = 2 Query: 194 DDLYSRLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNG---------------------IVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKA 736 +D+ + L ++ + + E + K ++ QE++K + +P ++G +E+++ N ++ ++T ++ ++ ++ + LKP V +++ S ++D LP E DS + + EKP YNDIGG + Q QE+ EA+ LP+TH E ++++G+ PP+GVLLYGPPGTGKT++A+A Sbjct: 23 EDITRATRLLDNEIRILKEDAQRTNLECDSYKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEDDAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDSLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARA 224
BLAST of DR403392 vs. ExPASy Swiss-Prot
Match: PRS6A_MOUSE (26S protease regulatory subunit 6A OS=Mus musculus GN=Psmc3 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.194e-26 Identity = 60/201 (29.85%), Postives = 114/201 (56.72%), Query Frame = 2 Query: 194 DDLYSRLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVD-----------------QNNG---IVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKA 736 +++ R + L +++ + + V E + +K ++ E++K +++P ++ +E++D Q G ++ ++T Y++ ++ ++ E LKP V +++ S +++ LP + DS + + E+P Y+DIGG D Q QE+ EA+ LP+ H E ++ +GI PP+GVL+YGPPGTGKT+LA+A Sbjct: 42 EEIVQRTRLLDSEIKIMKSEVLRVTHELQAMKDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTDYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARA 242
BLAST of DR403392 vs. ExPASy Swiss-Prot
Match: PR6AB_XENLA (26S protease regulatory subunit 6A-B OS=Xenopus laevis GN=psmc3-B PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.194e-26 Identity = 60/201 (29.85%), Postives = 114/201 (56.72%), Query Frame = 2 Query: 194 DDLYSRLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVD-----------------QNNG---IVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKA 736 +++ R + L +++ + + V E + ++ ++ E++K +++P ++ +E++D Q G ++ ++T Y++ ++ ++ E LKP V +++ S +++ LP E DS + + E+P Y+DIGG D Q QE+ EA+ LP+ H E ++ +GI PP+GVL+YGPPGTGKT+LA+A Sbjct: 4 EEIIQRTRLLDSEIKIMKSEVLRVTHELQAMRDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARA 204
BLAST of DR403392 vs. ExPASy Swiss-Prot
Match: PR6AA_XENLA (26S protease regulatory subunit 6A-A OS=Xenopus laevis GN=psmc3-A PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.194e-26 Identity = 60/201 (29.85%), Postives = 114/201 (56.72%), Query Frame = 2 Query: 194 DDLYSRLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVD-----------------QNNG---IVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKA 736 +++ R + L +++ + + V E + ++ ++ E++K +++P ++ +E++D Q G ++ ++T Y++ ++ ++ E LKP V +++ S +++ LP E DS + + E+P Y+DIGG D Q QE+ EA+ LP+ H E ++ +GI PP+GVL+YGPPGTGKT+LA+A Sbjct: 23 EEIIQRTRLLDSEIKIMKSEVLRVTHELQAMRDKIKENSEKIKVNKTLPYLVSNVIELLDVDPNDQEEDGANIDLDSQRKGKCAVIKTSTRQTYFLPVIGLVDAEKLKPGDLVGVNKDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARA 223
BLAST of DR403392 vs. ExPASy Swiss-Prot
Match: PRS6A_SOLLC (26S protease regulatory subunit 6A homolog OS=Solanum lycopersicum GN=TBP1 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.559e-26 Identity = 60/202 (29.70%), Postives = 112/202 (55.45%), Query Frame = 2 Query: 194 DDLYSRLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNG---------------------IVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKA 736 +D+ + L ++ I + + E + K ++ QE++K + +P ++G +E+++ N ++ ++T ++ ++ ++ + LKP V +++ S ++D LP E DS + + EKP Y+DIGG + Q QE+ EA+ LP+TH E ++++G+ PP+GVLLYGPPGTGKT++A+A Sbjct: 22 EDIIRASRLLDNEIRIIKEELQRTNLELDSFKEKIKENQEKIKLNKQLPYLVGNIVEILEMNPEEEAEEDGANIDLDSQRKGKCVVLKTSTRQTIFLPVVGLVDPDNLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDYHDIGGLEKQIQELVEAIVLPMTHQERFQKLGVRPPKGVLLYGPPGTGKTLMARA 223
BLAST of DR403392 vs. ExPASy Swiss-Prot
Match: PS10B_ARATH (26S protease regulatory subunit S10B homolog B OS=Arabidopsis thaliana GN=RPT4B PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.924e-26 Identity = 60/164 (36.59%), Postives = 102/164 (62.20%), Query Frame = 2 Query: 254 EEYVKDEQKNL---KRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKA 736 E V+ ++NL K+E + ++++K +QSV +IG+ + +D IV +++G Y V S +++E L V L + ++ LP E D + + + +++Y+ +GG Q +E+RE++ELPL + EL+ ++GI PP+GVLLYGPPGTGKT+LA+A Sbjct: 29 ESRVRTARENLRAAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARA 192
BLAST of DR403392 vs. ExPASy Swiss-Prot
Match: PS10A_ARATH (26S protease regulatory subunit 10B homolog A OS=Arabidopsis thaliana GN=RPT4A PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.924e-26 Identity = 60/164 (36.59%), Postives = 102/164 (62.20%), Query Frame = 2 Query: 254 EEYVKDEQKNL---KRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKA 736 E V+ ++NL K+E + ++++K +QSV +IG+ + +D IV +++G Y V S +++E L V L + ++ LP E D + + + +++Y+ +GG Q +E+RE++ELPL + EL+ ++GI PP+GVLLYGPPGTGKT+LA+A Sbjct: 29 ESRVRTARENLRGAKKEFNKTEDDLKSLQSVGQIIGEVLRPLDNERLIVKASSGPRYVVGCRSKVDKEKLTSGTRVVLDMTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARA 192
BLAST of DR403392 vs. ExPASy Swiss-Prot
Match: PRS8A_ARATH (26S protease regulatory subunit 8 homolog A OS=Arabidopsis thaliana GN=RPT6A PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.924e-26 Identity = 65/175 (37.14%), Postives = 102/175 (58.29%), Query Frame = 2 Query: 212 LKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKA 736 + LQRQL ++ ++ L + +EE++ +Q +G+ ++++ +N +V Y V I +I+ + PS VAL S L VLP + D ++L+ + PD TY+ IGG D Q +EI+E +ELP+ H EL++ +GI P+GVLLYGPPGTGKT+LA+A Sbjct: 40 IHELQRQLRQKTNNLNRLEAQRNELNSRVRMLREELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKITPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 214
BLAST of DR403392 vs. ExPASy Swiss-Prot
Match: PRS10_SCHPO (Probable 26S protease subunit rpt4 OS=Schizosaccharomyces pombe GN=rpt4 PE=2 SV=2) HSP 1 Score: 117.857 bits (294), Expect = 5.924e-26 Identity = 60/184 (32.61%), Postives = 111/184 (60.33%), Query Frame = 2 Query: 185 SDEDDLYSRLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKA 736 S+ D + KS Q D + + ++ ++L ++ + ++++K +QSV +IG+ ++ +D IV +++G Y V + +++ L V+L + ++ +LP E D + +S + D+++ +GG + Q +E+RE +ELPL + EL+ ++GI PP+GVLLYGPPGTGKT+LA+A Sbjct: 2 SERDTALEKYKSYLLQHREWDSKLKDLRFGNRDLVKKYDKTEDDIKSLQSVGQIIGEVLKQLDSERFIVKASSGPRYVVGCRNNVDQSHLVQGVRVSLDMTTLTIMRILPREVDPLVYNMSIEDPGDISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARA 185
BLAST of DR403392 vs. ExPASy Swiss-Prot
Match: PRS8B_ARATH (26S protease regulatory subunit 8 homolog B OS=Arabidopsis thaliana GN=RPT6B PE=2 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.724e-25 Identity = 68/175 (38.86%), Postives = 105/175 (60.00%), Query Frame = 2 Query: 212 LKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKA 736 L+ LQR+ + + E ++E + R L +EE++ +Q +G+ ++++ +N +V Y V I +I+ L PS VAL S L VLP + D ++L+ + PD TY+ IGG D Q +EI+E +ELP+ H EL++ +GI P+GVLLYGPPGTGKT+LA+A Sbjct: 43 LQRLQREKSYNLNRLEAQRNELNSRVRML---REELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVDIDKSIDITKLTPSTRVALRNDSYVLHLVLPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 214 The following BLAST results are available for this feature:
BLAST of DR403392 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 160
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403392 ID=DR403392; Name=DR403392; organism=Citrus sinensis; type=EST; length=738bpback to top |