DR403392
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of DR403392 vs. ExPASy Swiss-Prot
Match: PRS6A_DICDI (26S protease regulatory subunit 6A homolog OS=Dictyostelium discoideum GN=psmC3 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.251e-25 Identity = 60/190 (31.58%), Postives = 108/190 (56.84%), Query Frame = 2 Query: 194 DDLYSRLKSLQRQLEFIDIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQ---------NNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKA 736 D++ + K L+ + + + + E ++++ + ++++ +P ++ +E++D +V ++T ++ ++ + L+P V +++ S ++D LPPE DS + + EKP Y+DIGG D Q QE+ EAV LP+TH E ++ IGI PP+GVL+YGPPGTGKT+LA+A Sbjct: 32 DEVNRKAKLLENETKVLRSEHISKHLEMDSIQKRIKENNDKLQVNTQLPHLVANVVEIIDMVLDGETQPSKCVVVKASTRQTIFLAYPGIVDVDKLRPGDLVGINKDSYIILDTLPPEYDSRVKAMEIDEKPTEEYSDIGGLDKQIQELVEAVVLPMTHKERFESIGIKPPKGVLMYGPPGTGKTLLARA 221
BLAST of DR403392 vs. ExPASy Swiss-Prot
Match: PRS8_SCHPO (26S protease regulatory subunit 8 homolog OS=Schizosaccharomyces pombe GN=let1 PE=2 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.840e-25 Identity = 60/152 (39.47%), Postives = 94/152 (61.84%), Query Frame = 2 Query: 281 NLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKA 736 N + LLR EE++ +Q +G+ ++ + +N +V Y V I I+ + +KP+ VAL S L+ +LP + D +SL+ + PD TY +GG + Q +EI+E +ELP+ H EL++ +GI P+G+LLYGPPGTGKT+LA+A Sbjct: 49 NARVRLLR--EEIQLLQEPGSYVGEVIKTMGKNKVLVKVHPEGKYVVDISPDIDIKEIKPNIRVALRNDSYQLIKILPNKVDPLVSLMMVEKIPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARA 198
BLAST of DR403392 vs. ExPASy Swiss-Prot
Match: PRS8_ENCCU (26S protease regulatory subunit 8 homolog OS=Encephalitozoon cuniculi GN=RPT6 PE=1 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 3.840e-25 Identity = 60/158 (37.97%), Postives = 93/158 (58.86%), Query Frame = 2 Query: 263 VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKA 736 ++ ++ L R + +EE+ +Q +G +E + + +V + Y V++ +N + LK VAL S + +LP + D +SL+ + PD TY IGG D Q +EIRE +ELP+ H EL++ +GI P+GVLLYGPPGTGKT+LA+A Sbjct: 92 LEQKRAELNRRVRFLREEISIVQEPSSNVGVVVEKMGKMQVLVKTNPDGKYLVKVEPGVNYDELKAGVRVALRSDSYDVHRILPTKVDPLVSLMMVEKVPDSTYQMIGGLDEQIKEIREVIELPIKHPELFENLGIAQPKGVLLYGPPGTGKTLLARA 249
BLAST of DR403392 vs. ExPASy Swiss-Prot
Match: PRS8_NAEFO (26S protease regulatory subunit 8 homolog OS=Naegleria fowleri PE=2 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.550e-25 Identity = 64/177 (36.16%), Postives = 105/177 (59.32%), Query Frame = 2 Query: 242 IDIQEEYVKDEQKNLKRELLRAQ------------EEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKA 736 I +E ++D+ +NL+R L+AQ EE++++Q +G+ ++++ + ++ + Y V I +I + L P VAL S AL +LP + D +SL+ + PD TY +GG D Q +EI+E +ELP+ H EL++ +GI P+GV++YGPPGTGKT+LA+A Sbjct: 35 IQEKEIVLRDKIENLRR--LQAQRNELNGRVRSLKEELQQLQEPGSHVGEVVKVMGKKKVLIKISQEGKYIVDIDKSIELKDLTPGVRVALRNDSYALHKILPNKIDPLVSLMKVEKVPDATYEMVGGLDEQIKEIKEVIELPIKHPELFESLGIAQPKGVIMYGPPGTGKTLLARA 209
BLAST of DR403392 vs. ExPASy Swiss-Prot
Match: PRS10_DICDI (26S protease regulatory subunit S10B OS=Dictyostelium discoideum GN=psmC6 PE=1 SV=1) HSP 1 Score: 114.39 bits (285), Expect = 6.550e-25 Identity = 61/154 (39.61%), Postives = 93/154 (60.39%), Query Frame = 2 Query: 278 KNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINR-ELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKA 736 K LK++ + ++ +K IQ + +IG+ + +D+ IV + G Y VR + ++ LL P A V L + ++ +LP E D I ++ V+Y +IGG Q +E+RE VELPL EL+ ++GI P+GVLLYGPPGTGKT+LA+A Sbjct: 37 KKLKKDFQKTEDHIKTIQYIGEIIGEVLRSLDEERFIVKACNGPRYVVRCANYQDKAHLLVPGARVTLDLTTLTILKILPREVDPIIFNMTAESPGSVSYGEIGGLSNQIRELREVVELPLMIPELFIRVGIKAPKGVLLYGPPGTGKTLLARA 190
BLAST of DR403392 vs. ExPASy Swiss-Prot
Match: PSMR2_HALSA (Proteasome-activating nucleotidase 2 OS=Halobacterium salinarium GN=pan2 PE=3 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 1.459e-24 Identity = 72/202 (35.64%), Postives = 112/202 (55.45%), Query Frame = 2 Query: 158 TRSDLTEQWSDEDDLYSRLKSLQRQLEFIDIQEEY------VKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINREL---LKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKA 736 T D+ + D +L++L+ QL ++ + E E +++L R E K+++ PL I E+ D+ G V G+N L+ + EL L+P + VA++ +S ++V L EAD ++ + PDV Y DIGG D Q +E+RE VELP+ L++ +GI+PP GVLL+GPPGTGKT++AKA Sbjct: 6 TVEDVELPYDDSASQQDKLEALEEQLSTLEEENEERDRLLDANAENNKYQQKLERLSHENKKLKQSPLFIATVQELTDE--GAVIKQHGNNQ--EALTEVTDELRATLEPGSRVAVN-NSLSVVRQLDDEADVRARVMEVDDSPDVGYEDIGGLDDQLREVRETVELPMKDPGLFETVGINPPSGVLLHGPPGTGKTLMAKA 202
BLAST of DR403392 vs. ExPASy Swiss-Prot
Match: PRS8_RAT (26S protease regulatory subunit 8 OS=Rattus norvegicus GN=Psmc5 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.545e-24 Identity = 67/183 (36.61%), Postives = 102/183 (55.74%), Query Frame = 2 Query: 224 QRQLEFIDIQEEYVKDEQKNLKRELLRAQ------------EEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKA 736 Q L I+ + V D+ +NL+R L+AQ EE++ +Q +G+ + +D+ +V + V + I+ + P+ VAL S L +LP + D +SL+ + PD TY IGG D Q +EI+E +ELP+ H EL++ +GI P+GVLLYGPPGTGKT+LA+A Sbjct: 22 QYYLSKIEELQLIVNDKSQNLRR--LQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 202
BLAST of DR403392 vs. ExPASy Swiss-Prot
Match: PRS8_PIG (26S protease regulatory subunit 8 OS=Sus scrofa GN=PSMC5 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.545e-24 Identity = 67/183 (36.61%), Postives = 102/183 (55.74%), Query Frame = 2 Query: 224 QRQLEFIDIQEEYVKDEQKNLKRELLRAQ------------EEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKA 736 Q L I+ + V D+ +NL+R L+AQ EE++ +Q +G+ + +D+ +V + V + I+ + P+ VAL S L +LP + D +SL+ + PD TY IGG D Q +EI+E +ELP+ H EL++ +GI P+GVLLYGPPGTGKT+LA+A Sbjct: 22 QYYLSKIEELQLIVNDKSQNLRR--LQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 202
BLAST of DR403392 vs. ExPASy Swiss-Prot
Match: PRS8_MOUSE (26S protease regulatory subunit 8 OS=Mus musculus GN=Psmc5 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.545e-24 Identity = 67/183 (36.61%), Postives = 102/183 (55.74%), Query Frame = 2 Query: 224 QRQLEFIDIQEEYVKDEQKNLKRELLRAQ------------EEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKA 736 Q L I+ + V D+ +NL+R L+AQ EE++ +Q +G+ + +D+ +V + V + I+ + P+ VAL S L +LP + D +SL+ + PD TY IGG D Q +EI+E +ELP+ H EL++ +GI P+GVLLYGPPGTGKT+LA+A Sbjct: 22 QYYLSKIEELQLIVNDKSQNLRR--LQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 202
BLAST of DR403392 vs. ExPASy Swiss-Prot
Match: PRS8_HUMAN (26S protease regulatory subunit 8 OS=Homo sapiens GN=PSMC5 PE=1 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.545e-24 Identity = 67/183 (36.61%), Postives = 102/183 (55.74%), Query Frame = 2 Query: 224 QRQLEFIDIQEEYVKDEQKNLKRELLRAQ------------EEVKRIQSVPLVIGQFMEMVDQNNGIVGSTTGSNYYVRILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLSQSEKPDVTYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKA 736 Q L I+ + V D+ +NL+R L+AQ EE++ +Q +G+ + +D+ +V + V + I+ + P+ VAL S L +LP + D +SL+ + PD TY IGG D Q +EI+E +ELP+ H EL++ +GI P+GVLLYGPPGTGKT+LA+A Sbjct: 22 QYYLSKIEELQLIVNDKSQNLRR--LQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 202 The following BLAST results are available for this feature:
BLAST of DR403392 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 160
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403392 ID=DR403392; Name=DR403392; organism=Citrus sinensis; type=EST; length=738bpback to top |