DR403386

Overview
NameDR403386
Unique NameDR403386
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length757
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403386 vs. ExPASy Swiss-Prot
Match: SAP12_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 12 OS=Oryza sativa subsp. japonica GN=SAP12 PE=2 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.220e-23
Identity = 58/164 (35.37%), Postives = 82/164 (50.00%), Query Frame = 1
Query:  172 ENMDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKD-------------------------------------IMLKQDQASSELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDK 552
            E  +       A  E   LC + CGFFGS  T NMCSKCY+D                                     +  K+++A++  S S  A  K  P+RC +C+K+VGL GF+CRCG  +C +HR++DKH C FD++ + R+ I K NP+I A K+ K
Sbjct:   62 EEEEASTAAAAAADEQLALCSSGCGFFGSKETNNMCSKCYRDHLKATSPLFSSSSSPATASTTDITVPIAPATTAPTPSLKGKEEEATAAASSSAAAAAK--PNRCVACRKKVGLLGFECRCGGTFCSTHRHADKHACTFDFKKSDREKIAKENPLIVAPKITK 223          
BLAST of DR403386 vs. ExPASy Swiss-Prot
Match: SAP9_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 9 OS=Arabidopsis thaliana GN=SAP9 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.205e-22
Identity = 55/174 (31.61%), Postives = 84/174 (48.28%), Query Frame = 1
Query:  169 GENMDHDETGCQAPPEGPILCINNCGFFGSVATMNMCSKCYKDIMLKQDQ---ASSELSES------------------VEAKPKEGP-------------------------SRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDK 552
            G   +   +  Q+    P LC+  CGFFGS + M++CSKCY+ I  ++ Q   A + + +S                  VE KP++                           +RC  C K+VG+ GFKC+CG+ +C  HRY + H+C FD++   R  I KANPV+KA+K+ +
Sbjct:    2 GSEQNDSTSFTQSQASEPKLCVKGCGFFGSPSNMDLCSKCYRGICAEEAQTAVAKAAVEKSFKPSPPRSLFIAEPPAVVVEPKPEKAAVVVVSAEPSSSAVPEANEPSRPARTNRCLCCNKKVGIMGFKCKCGSTFCGEHRYPETHDCSFDFKEVGRGEIAKANPVVKADKIQR 175          
BLAST of DR403386 vs. ExPASy Swiss-Prot
Match: SAP10_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 10 OS=Arabidopsis thaliana GN=SAP10 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.218e-21
Identity = 47/120 (39.17%), Postives = 70/120 (58.33%), Query Frame = 1
Query:  229 CINNCGFFGSVATMNMCSKCYKDIMLKQDQA---SSELSESVEAKPKEGPS---------RCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDK 552
            C   CG +G+    N+CS CYK  +L+   A     E  +S    P   P+         RC  CK++VG+ GFKCRCG+++C SHRY ++H+CPFDY+ + R A+    P+I+A+KL +
Sbjct:   10 CEGGCGLYGTRVNNNLCSLCYKKSVLQHSPALRFEPETEQSQCCPPTNSPAVEEEPVKKRRCGICKRKVGMLGFKCRCGHMFCGSHRYPEEHSCPFDYKQSGRLALATQLPLIRADKLQR 129          
BLAST of DR403386 vs. ExPASy Swiss-Prot
Match: ZFAN6_BOVIN (AN1-type zinc finger protein 6 OS=Bos taurus GN=ZFAND6 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.544e-21
Identity = 46/80 (57.50%), Postives = 60/80 (75.00%), Query Frame = 1
Query:  316 QASSELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 555
            QAS E S+S+E KPK+  +RC  C+K+VGLTGF+CRCGN+YC  HRYSD HNC ++Y+  A + I K NPV+  EK+ KI
Sbjct:  130 QASEEQSKSLE-KPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 208          
BLAST of DR403386 vs. ExPASy Swiss-Prot
Match: ZFAN5_MOUSE (AN1-type zinc finger protein 5 OS=Mus musculus GN=Zfand5 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 6.045e-21
Identity = 44/79 (55.70%), Postives = 55/79 (69.62%), Query Frame = 1
Query:  319 ASSELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 555
            +SS+  E     PK   +RC  C+K+VGLTGF CRCGNL+C  HRYSDKHNCP+DY+  A   I K NPV+ AEK+ +I
Sbjct:  135 SSSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213          
BLAST of DR403386 vs. ExPASy Swiss-Prot
Match: ZFAN6_RAT (AN1-type zinc finger protein 6 OS=Rattus norvegicus GN=Zfand6 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.347e-20
Identity = 45/80 (56.25%), Postives = 59/80 (73.75%), Query Frame = 1
Query:  316 QASSELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 555
            Q S E S+S+E KPK+  +RC  C+K+VGLTGF+CRCGN+YC  HRYSD HNC ++Y+  A + I K NPV+  EK+ KI
Sbjct:  145 QPSEEQSKSLE-KPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 223          
BLAST of DR403386 vs. ExPASy Swiss-Prot
Match: ZFAN6_PONAB (AN1-type zinc finger protein 6 OS=Pongo abelii GN=ZFAND6 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.347e-20
Identity = 45/80 (56.25%), Postives = 59/80 (73.75%), Query Frame = 1
Query:  316 QASSELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 555
            Q S E S+S+E KPK+  +RC  C+K+VGLTGF+CRCGN+YC  HRYSD HNC ++Y+  A + I K NPV+  EK+ KI
Sbjct:  130 QPSEEQSKSLE-KPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 208          
BLAST of DR403386 vs. ExPASy Swiss-Prot
Match: ZFAN6_MOUSE (AN1-type zinc finger protein 6 OS=Mus musculus GN=Zfand6 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.347e-20
Identity = 45/80 (56.25%), Postives = 59/80 (73.75%), Query Frame = 1
Query:  316 QASSELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 555
            Q S E S+S+E KPK+  +RC  C+K+VGLTGF+CRCGN+YC  HRYSD HNC ++Y+  A + I K NPV+  EK+ KI
Sbjct:  145 QPSEEQSKSLE-KPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 223          
BLAST of DR403386 vs. ExPASy Swiss-Prot
Match: ZFAN6_HUMAN (AN1-type zinc finger protein 6 OS=Homo sapiens GN=ZFAND6 PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.347e-20
Identity = 45/80 (56.25%), Postives = 59/80 (73.75%), Query Frame = 1
Query:  316 QASSELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 555
            Q S E S+S+E KPK+  +RC  C+K+VGLTGF+CRCGN+YC  HRYSD HNC ++Y+  A + I K NPV+  EK+ KI
Sbjct:  130 QPSEEQSKSLE-KPKQKKNRCFMCRKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI 208          
BLAST of DR403386 vs. ExPASy Swiss-Prot
Match: ZFAN5_HUMAN (AN1-type zinc finger protein 5 OS=Homo sapiens GN=ZFAND5 PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.347e-20
Identity = 43/79 (54.43%), Postives = 55/79 (69.62%), Query Frame = 1
Query:  319 ASSELSESVEAKPKEGPSRCSSCKKRVGLTGFKCRCGNLYCVSHRYSDKHNCPFDYRTAARDAIIKANPVIKAEKLDKI 555
            ++S+  E     PK   +RC  C+K+VGLTGF CRCGNL+C  HRYSDKHNCP+DY+  A   I K NPV+ AEK+ +I
Sbjct:  135 STSQSEEKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213          
The following BLAST results are available for this feature:
BLAST of DR403386 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
SAP12_ORYSJ2.220e-2335.37Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP9_ARATH3.205e-2231.61Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP10_ARATH1.218e-2139.17Zinc finger A20 and AN1 domain-containing stress-a... [more]
ZFAN6_BOVIN3.544e-2157.50AN1-type zinc finger protein 6 OS=Bos taurus GN=ZF... [more]
ZFAN5_MOUSE6.045e-2155.70AN1-type zinc finger protein 5 OS=Mus musculus GN=... [more]
ZFAN6_RAT1.347e-2056.25AN1-type zinc finger protein 6 OS=Rattus norvegicu... [more]
ZFAN6_PONAB1.347e-2056.25AN1-type zinc finger protein 6 OS=Pongo abelii GN=... [more]
ZFAN6_MOUSE1.347e-2056.25AN1-type zinc finger protein 6 OS=Mus musculus GN=... [more]
ZFAN6_HUMAN1.347e-2056.25AN1-type zinc finger protein 6 OS=Homo sapiens GN=... [more]
ZFAN5_HUMAN1.347e-2054.43AN1-type zinc finger protein 5 OS=Homo sapiens GN=... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244N10 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244N10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403386 ID=DR403386; Name=DR403386; organism=Citrus sinensis; type=EST; length=757bp
GGGGACACCCGGAAAGGGAAACGAGGACGTCTCTCATCGGTTTTTGCCTG
CTCTCTCCCCGATAGGCCGATCTGGTCCATTTAATTTTAGGGGCTCATTG
GATGCTGGCTTGAGCTCGGGGATCGGCTTAAGGGATTCATTGCTGTTTCT
TCTGTTGCTCGCAGGGGTGGTGAAAACATGGACCATGATGAGACTGGATG
CCAAGCTCCTCCTGAGGGCCCTATCTTGTGCATCAACAATTGTGGTTTCT
TTGGAAGTGTGGCTACTATGAATATGTGTTCCAAATGCTACAAGGATATA
ATGCTGAAACAGGATCAAGCTAGTTCAGAATTGAGCGAGAGTGTGGAGGC
AAAGCCGAAGGAGGGTCCCAGCCGGTGCAGCAGTTGCAAGAAGCGTGTTG
GTTTAACAGGATTCAAATGTCGCTGTGGTAACTTATACTGTGTGTCACAT
CGCTATTCGGACAAACATAACTGCCCCTTTGACTACCGCACTGCTGCTAG
GGATGCTATAATTAAAGCAAACCCTGTGATCAAGGCTGAGAAGCTAGATA
AAATCTAGATTCAATGGGATGAGGTTTCAATAATCAAAGAATGATGATCT
TGCTCATCTGTTAGAGGCTTCTTCTGAGAAGGCCACGTATCTTATCAGGT
GTCCTTTAATGTTATATATGCTGGGGGCCCATTATCAGTTATAGGACATC
TCTGCAGTATGAAGAACTCTATGTCGTGTGTTGGCGAGAACTTATATGTT
GGCTTCA
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