DR403383

Overview
NameDR403383
Unique NameDR403383
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DR403383_ssr42 microsatellite DR403383_ssr42:42..56. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7034 contig Csv1_Contig7034:97..837. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403383 vs. ExPASy Swiss-Prot
Match: CATL_SARPE (Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 1.994e-32
Identity = 79/185 (42.70%), Postives = 103/185 (55.68%), Query Frame = 3
Query:  153 LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRR-AKRRQLLDPTAVH---GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTN------DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 677
            L+  E H   +K +  K YA + E  +R ++F  N  + AK  QL     V    G+ K++D+   EF+    G N  LR     +   +  T        +P   DWR+HGAVTGVKDQG CGSCW+FS+TGALEG HF   G LVSLSEQ LVDC  +         ++GCNGGLM++AF YI
Sbjct:   23 LIKEEWH--TYKLQHRKNYANEVEERFRMKIFNENRHKIAKHNQLFAQGKVSYKLGLNKYADMLHHEFKETMNGYNHTLRQLMRERTGLVGATYIPPAHVTVPKSVDWREHGAVTGVKDQGHCGSCWAFSSTGALEGQHFRKAGVLVSLSEQNLVDCSTKYG-------NNGCNGGLMDNAFRYI 198          

HSP 2 Score: 24.6386 bits (52), Expect = 1.994e-32
Identity = 8/13 (61.54%), Postives = 10/13 (76.92%), Query Frame = 1
Query:  688 GGVEREKDYPYTG 726
            GG++ EK YPY G
Sbjct:  202 GGIDTEKSYPYEG 214          
BLAST of DR403383 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.366e-32
Identity = 78/194 (40.21%), Postives = 113/194 (58.25%), Query Frame = 3
Query:  120 VPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLN------RRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK 683
            V + G +SE  +++    + L K   +++  +  E D RF +FK NLR        + +   G+T+F+DLT  E+R ++LG        RR  L  +A+       ++LP   DWR  GAV  VKDQG CGSCW+FS  GA+EG + + TG+L++LSEQ+LVDCD         S + GCNGGLM+ AFE+I+K
Sbjct:   35 VSTTGGRSEAEVMSIYEAW-LVKHGKAQSQNSLVEKDRRFEIFKDNLRFVDEHNEKNLSYRLGLTRFADLTNDEYRSKYLGAKMEKKGERRTSLRYEARVG-----DELPESIDWRKKGAVAEVKDQGGCGSCWAFSTIGAVEGINQIVTGDLITLSEQELVDCD--------TSYNEGCNGGLMDYAFEFIIK 214          

HSP 2 Score: 27.335 bits (59), Expect = 3.366e-32
Identity = 9/16 (56.25%), Postives = 12/16 (75.00%), Query Frame = 1
Query:  688 GGVEREKDYPYTGXXG 735
            GG++ +KDYPY G  G
Sbjct:  216 GGIDTDKDYPYKGVDG 231          
BLAST of DR403383 vs. ExPASy Swiss-Prot
Match: XCP1_ARATH (Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 3.379e-32
Identity = 79/186 (42.47%), Postives = 111/186 (59.68%), Query Frame = 3
Query:  147 DHLLNAEHHFSLFKS---KFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGL-----NRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL 680
            +HL N +    LF+S   + SK Y + EE  +RF VF+ NL    +R     +   G+ +F+DLT  EF+ ++LGL     +R+ +  A+ +   I    DLP   DWR  GAV  VKDQG CGSCW+FS   A+EG + ++TG L SLSEQ+L+DCD         + +SGCNGGLM+ AF+YI+
Sbjct:   39 EHLTNTDKLLELFESWMSEHSKAYKSVEEKVHRFEVFRENLMHIDQRNNEINSYWLGLNEFADLTHEEFKGRYLGLAKPQFSRKRQPSANFRYRDI---TDLPKSVDWRKKGAVAPVKDQGQCGSCWAFSTVAAVEGINQITTGNLSSLSEQELIDCD--------TTFNSGCNGGLMDYAFQYII 213          

HSP 2 Score: 22.3274 bits (46), Expect = 3.379e-32
Identity = 7/11 (63.64%), Postives = 9/11 (81.82%), Query Frame = 1
Query:  688 GGVEREKDYPY 720
            GG+ +E DYPY
Sbjct:  216 GGLHKEDDYPY 226          
BLAST of DR403383 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.399e-32
Identity = 75/165 (45.45%), Postives = 105/165 (63.64%), Query Frame = 3
Query:  201 KTYATQEEHDYRFRVFKANLRRA-KRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAP--ILPTND-LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK 683
            K Y    E + RF++FK NL+   +   + D T   G+T+F+DLT  EFR  +L   +++    D+ K    +    D LP + DWR +GAV  VKDQG CGSCW+FSA GA+EG + ++TGEL+SLSEQ+LVDCD        G  ++GC+GG+MN AFE+I+K
Sbjct:   53 KNYNGLGEKERRFKIFKDNLKFVDEHNSVPDRTFEVGLTRFADLTNEEFRAIYL--RKKMERTKDSVKTERYLYKEGDVLPDEVDWRANGAVVSVKDQGNCGSCWAFSAVGAVEGINQITTGELISLSEQELVDCDR-------GFVNAGCDGGIMNYAFEFIMK 208          

HSP 2 Score: 23.483 bits (49), Expect = 4.399e-32
Identity = 7/11 (63.64%), Postives = 10/11 (90.91%), Query Frame = 1
Query:  688 GGVEREKDYPY 720
            GG+E ++DYPY
Sbjct:  210 GGIETDQDYPY 220          
BLAST of DR403383 vs. ExPASy Swiss-Prot
Match: CATV_NPVAH (Viral cathepsin OS=Adoxophyes honmai nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.267e-31
Identity = 74/210 (35.24%), Postives = 117/210 (55.71%), Query Frame = 3
Query:  105 MIRQVVPSDGEQSEDHLL----NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQK------------APILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA 686
            MI  ++     Q E HL     +A+H+F  F   ++K Y   +  +YRF++FK NL     +  L+ +A++ + KFSDL+ +E   ++ GL  +   P++  +            AP    ++LP +FDWR +  +T VKDQGACGSCW+ +A G LE  + +    L++LSEQQL+DCD         S +  C+GGLM++AFE ++ A
Sbjct:    5 MIFTILLVASSQIEGHLKFDIHDAQHYFETFIINYNKQYPDTKTKNYRFKIFKQNLEDINEKNKLNDSAIYNINKFSDLSKNELLTKYTGLTSKK--PSNMVRSTSNFCNVIHLDAPPDVHDELPQNFDWRVNNKMTSVKDQGACGSCWAHAAVGTLETLYAIKHNYLINLSEQQLIDCD---------SANMACDGGLMHTAFEQLMNA 203          

HSP 2 Score: 23.483 bits (49), Expect = 1.267e-31
Identity = 9/16 (56.25%), Postives = 10/16 (62.50%), Query Frame = 1
Query:  688 GGVEREKDYPYTGXXG 735
            GG+  E DYPY G  G
Sbjct:  204 GGLMEEIDYPYQGTKG 219          
BLAST of DR403383 vs. ExPASy Swiss-Prot
Match: CPR1_DROME (Putative cysteine proteinase CG12163 OS=Drosophila melanogaster GN=CG12163 PE=2 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 1.635e-31
Identity = 70/174 (40.23%), Postives = 107/174 (61.49%), Query Frame = 3
Query:  165 EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP-TAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPT--NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 677
            +H F  F+ +F + Y +  E   R R+F+ NL+  +     +  +A +G+T+F+D+T SE++ +  GL +R    A    A ++P    +LP +FDWR   AVT VK+QG+CGSCW+FS TG +EG + + TGEL   SEQ+L+DCD         + DS CNGGLM++A++ I
Sbjct:  305 DHLFYKFQVRFGRRYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADMTSSEYKER-TGLWQRDEAKATGGSAAVVPAYHGELPKEFDWRQKDAVTQVKNQGSCGSCWAFSVTGNIEGLYAVKTGELKEFSEQELLDCD---------TTDSACNGGLMDNAYKAI 468          

HSP 2 Score: 21.9422 bits (45), Expect = 1.635e-31
Identity = 7/12 (58.33%), Postives = 10/12 (83.33%), Query Frame = 1
Query:  685 LGGVEREKDYPY 720
            +GG+E E +YPY
Sbjct:  471 IGGLEYEAEYPY 482          
BLAST of DR403383 vs. ExPASy Swiss-Prot
Match: GCP1_ARATH (Germination-specific cysteine protease 1 OS=Arabidopsis thaliana GN=GCP1 PE=2 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.647e-31
Identity = 78/200 (39.00%), Postives = 112/200 (56.00%), Query Frame = 3
Query:  120 VPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQE----EHDYRFRVFKANLRRAKRRQLLDPTAVH--GVTKFSDLTPSEFRRQFLGLN----RRLRLPADAQKAPILPTN--DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK 683
            +PSDG+   D  + +   +  + ++  KT         + D RF +FK NLR        +  A +  G+TKF+DLT  E+R+ +LG      RR+    +  +      N  ++P   DWR  GAV  +KDQG CGSCW+FS T A+EG + + TGEL+SLSEQ+LVDCD         S + GCNGGLM+ AF++I+K
Sbjct:   33 LPSDGKWRTDEEVRSI--YLQWSAEHGKTNNNNNGIINDQDKRFNIFKDNLRFIDLHNEDNKNATYKLGLTKFTDLTNDEYRKLYLGARTEPARRIAKAKNVNQKYSAAVNGKEVPETVDWRQKGAVNPIKDQGTCGSCWAFSTTAAVEGINKIVTGELISLSEQELVDCDK--------SYNQGCNGGLMDYAFQFIMK 222          

HSP 2 Score: 26.9498 bits (58), Expect = 1.647e-31
Identity = 10/16 (62.50%), Postives = 11/16 (68.75%), Query Frame = 1
Query:  688 GGVEREKDYPYTGXXG 735
            GG+  EKDYPY G  G
Sbjct:  224 GGLNTEKDYPYRGFGG 239          
BLAST of DR403383 vs. ExPASy Swiss-Prot
Match: CRUST_PANBO (Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 8.049e-31
Identity = 78/170 (45.88%), Postives = 95/170 (55.88%), Query Frame = 3
Query:  183 FKSKFSKTYATQEEHDYRFRVFKANLR----RAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL 680
            FK+KF K YA  EE  +R  VF   L+      +R    + T    +  FSDLT  E      G+ RR    +   K+   PT  +  D DWR+ GAVT VKDQG CGSCW+FSA  ALEGAHFL TG+LVSLSEQ LVDC        S   + GCNGG    A++YI+
Sbjct:   23 FKTKFGKKYANSEEESHRMSVFMDKLKFIQEHNERYDKGEVTYWLKINNFSDLTHEEVLATKTGMTRRRHPLSVLPKSA--PTTPMAADVDWRNKGAVTPVKDQGQCGSCWAFSAVAALEGAHFLKTGDLVSLSEQNLVDC-------SSSYGNQGCNGGWPYQAYQYII 183          
BLAST of DR403383 vs. ExPASy Swiss-Prot
Match: CYSP2_DICDI (Cysteine proteinase 2 OS=Dictyostelium discoideum GN=cprB PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 2.308e-30
Identity = 75/174 (43.10%), Postives = 101/174 (58.05%), Query Frame = 3
Query:  174 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKR-RQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDL---PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK 683
            F+ +  KF++ Y++ E  + R+ +FK+N+          D   V G+  F+D+T  E+R+ +LG               +L   DL   P   DWR   AVT +KDQG CGSCWSFS TG+ EGAH L T +LVSLSEQ LVDC     PEE    + GC+GGLMN+AF+YI+K
Sbjct:   36 FTEWTLKFNRQYSSSEFSN-RYSIFKSNMDYVDNWNSKGDSQTVLGLNNFADITNEEYRKTYLGTRVNAHSYNGYDGREVLNVEDLQTNPKSIDWRTKNAVTPIKDQGQCGSCWSFSTTGSTEGAHALKTKKLVSLSEQNLVDCS---GPEE----NFGCDGGLMNNAFDYIIK 201          

HSP 2 Score: 22.3274 bits (46), Expect = 2.308e-30
Identity = 7/17 (41.18%), Postives = 10/17 (58.82%), Query Frame = 1
Query:  691 GVEREKDYPYTGXXGGS 741
            G++ E  YPYT   G +
Sbjct:  204 GIDTESSYPYTAETGST 220          
BLAST of DR403383 vs. ExPASy Swiss-Prot
Match: XCP2_ARATH (Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 2.310e-30
Identity = 73/185 (39.46%), Postives = 103/185 (55.68%), Query Frame = 3
Query:  138 QSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDL---PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK 683
            +S D L+     F  + S F K Y T EE   RF VFK NL+          +   G+ +F+DL+  EF++ +LGL   +    + +        D+   P   DWR  GAV  VK+QG+CGSCW+FS   A+EG + + TG L +LSEQ+L+DCD         + ++GCNGGLM+ AFEYI+K
Sbjct:   42 ESHDKLIEL---FENWISNFEKAYETVEEKFLRFEVFKDNLKHIDETNKKGKSYWLGLNEFADLSHEEFKKMYLGLKTDIVRRDEERSYAEFAYRDVEAVPKSVDWRKKGAVAEVKNQGSCGSCWAFSTVAAVEGINKIVTGNLTTLSEQELIDCD--------TTYNNGCNGGLMDYAFEYIVK 215          

HSP 2 Score: 23.8682 bits (50), Expect = 2.310e-30
Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 1
Query:  688 GGVEREKDYPYTGXXG 735
            GG+ +E+DYPY+   G
Sbjct:  217 GGLRKEEDYPYSMEEG 232          
The following BLAST results are available for this feature:
BLAST of DR403383 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
CATL_SARPE1.994e-3242.70Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1[more]
RD21A_ARATH3.366e-3240.21Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]
XCP1_ARATH3.379e-3242.47Xylem cysteine proteinase 1 OS=Arabidopsis thalian... [more]
CPR1_ARATH4.399e-3245.45Probable cysteine proteinase At3g19400 OS=Arabidop... [more]
CATV_NPVAH1.267e-3135.24Viral cathepsin OS=Adoxophyes honmai nucleopolyhed... [more]
CPR1_DROME1.635e-3140.23Putative cysteine proteinase CG12163 OS=Drosophila... [more]
GCP1_ARATH1.647e-3139.00Germination-specific cysteine protease 1 OS=Arabid... [more]
CRUST_PANBO8.049e-3145.88Crustapain OS=Pandalus borealis GN=Cys PE=1 SV=1[more]
CYSP2_DICDI2.308e-3043.10Cysteine proteinase 2 OS=Dictyostelium discoideum ... [more]
XCP2_ARATH2.310e-3039.46Xylem cysteine proteinase 2 OS=Arabidopsis thalian... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244N07 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244N07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403383 ID=DR403383; Name=DR403383; organism=Citrus sinensis; type=EST; length=742bp
GGGGAAACAAATCGAAAATGGAGCGCCTTATTCTCTCCTCTCTCCTCCTC
CTCCTCCTATCTTCTGTGCTTGCGTCCGCTGTAGCTGTCAACGACGACGA
TGCTATGATCAGACAGGTCGTGCCGTCAGACGGCGAACAATCCGAAGATC
ATCTCCTGAACGCGGAGCACCACTTCTCCCTCTTCAAGTCCAAATTCTCC
AAGACTTACGCCACCCAGGAGGAGCACGATTACCGATTCCGCGTGTTCAA
GGCTAATCTGCGCCGAGCAAAGCGACGCCAGCTCCTGGACCCCACTGCTG
TCCACGGTGTCACCAAGTTCTCCGACTTAACGCCGTCTGAATTCCGCCGT
CAGTTCCTTGGCTTGAATAGGCGGCTTCGGCTGCCAGCTGACGCTCAAAA
GGCTCCTATTCTCCCCACCAACGATCTTCCTACTGACTTTGACTGGCGTG
ATCACGGCGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGC
TGGTCGTTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGAC
GGGCGAGCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACG
AGTGTGATCCAGAGGAATCTGGTTCATGTGACTCTGGGTGCAATGGTGGG
CTAATGAACTCTGCCTTTGAGTACATACTCAAGGCTNGGTGGGGTTGAGC
GAGAGAAGGACTACCCTTACACTGGGANNNACGGTGGTTCCT
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