DR403383

Overview
NameDR403383
Unique NameDR403383
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403383 vs. ExPASy Swiss-Prot
Match: CATQ_RAT (Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 5.526e-17
Identity = 61/189 (32.28%), Postives = 92/189 (48.68%), Query Frame = 3
Query:  156 LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRA----KRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGL-----NRRLRLPADAQKAPILPTN-----DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL 680
            L+ +  +  +K K+ K Y+ +EE   R  V++ N+++     +   L   T    +  F+D+T  EF+   +G      N   RL   A  +   P +      LP   DWR+ G VT V+ QG C SCW+F  TGA+EG  F  TG+L+ LS Q L+DC            + GC  G   +AF+Y+L
Sbjct:   23 LSLDVQWQEWKIKYEKLYSPEEEVLKRV-VWEENVKKIELHNRENSLGKNTYTMEINDFADMTDEEFKDMIIGFQLPVHNTEKRLWKRALGS-FFPNSWNWRDALPKFVDWRNEGYVTRVRKQGGCSSCWAFPVTGAIEGQMFKKTGKLIPLSVQNLIDC-------SKPQGNRGCLWGNTYNAFQYVL 202          

HSP 2 Score: 20.7866 bits (42), Expect = 5.526e-17
Identity = 8/16 (50.00%), Postives = 9/16 (56.25%), Query Frame = 1
Query:  688 GGVEREKDYPYTGXXG 735
            GG+E E  YPY    G
Sbjct:  205 GGLEAEATYPYERKEG 220          
BLAST of DR403383 vs. ExPASy Swiss-Prot
Match: ERVC_TABDI (Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 5.610e-17
Identity = 41/85 (48.24%), Postives = 54/85 (63.53%), Query Frame = 3
Query:  426 LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL 680
            LP   DWR  GAVT VK+QG+CGSCW+FS    +E  + + TG L+SLSEQ+LVDCD +         + GC GG    A++YI+
Sbjct:    1 LPEQIDWRKKGAVTPVKNQGSCGSCWAFSTVSTVESINQIRTGNLISLSEQELVDCDKK---------NHGCLGGAFVFAYQYII 76          

HSP 2 Score: 20.7866 bits (42), Expect = 5.610e-17
Identity = 6/16 (37.50%), Postives = 10/16 (62.50%), Query Frame = 1
Query:  688 GGVEREKDYPYTGXXG 735
            GG++ + +YPY    G
Sbjct:   79 GGIDTQANYPYKAVQG 94          
BLAST of DR403383 vs. ExPASy Swiss-Prot
Match: CATR_MOUSE (Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.215e-16
Identity = 61/186 (32.80%), Postives = 92/186 (49.46%), Query Frame = 3
Query:  147 DHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVT----KFSDLTPSEFRRQFLGLN----RRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL 680
            D  L+AE  +  +K K++K+Y+ +EE   R  V++  L+  K     +    +G T    +F D T  EFR+  + ++    R  +     +   ILP        DWR  G VT V+ QG C +CW+F+ TGA+E      TG+L  LS Q LVDC            ++GC GG   +AF+Y+L
Sbjct:   22 DSSLDAE--WQDWKIKYNKSYSLKEEKLKRV-VWEEKLKMIKLHNRENSLGKNGFTMKMNEFGDQTDEEFRKMMIEISVWTHREGKSIMKREAGSILPKF-----VDWRKKGYVTPVRRQGDCDACWAFAVTGAIEAQAIWQTGKLTPLSVQNLVDC-------SKPQGNNGCLGGDTYNAFQYVL 192          

HSP 2 Score: 23.8682 bits (50), Expect = 1.215e-16
Identity = 9/16 (56.25%), Postives = 10/16 (62.50%), Query Frame = 1
Query:  688 GGVEREKDYPYTGXXG 735
            GG+E E  YPY G  G
Sbjct:  195 GGLESEATYPYEGKDG 210          
BLAST of DR403383 vs. ExPASy Swiss-Prot
Match: CATL_BRUPA (Cathepsin L-like OS=Brugia pahangi PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.474e-16
Identity = 62/192 (32.29%), Postives = 94/192 (48.96%), Query Frame = 3
Query:  129 DGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKAN------LRRAKRRQLLDPTAVHGVTKFSDLTPSEFR-RQFLGLNRRLRLPADAQKAPIL---PTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEY 674
            +GEQ     L  E  +  + +   K Y  Q+E+++R  +F++N      + +   + L+  T    +   +DLT  EF  R  L L  +  L    Q +       +  LP   DWR  GAVT V++QG CGSC++F+   ALE  H   TG L+ LS Q +VDC            ++GC+GG M +AF+Y
Sbjct:   78 NGEQRAMEKLETE--WKDYVTALGKHY-DQKENNFRMAIFESNELMTERINKKYEQGLVSYTTA--LNDLADLTDEEFMVRNGLRLPNQTDLRGKRQTSEFYRYDKSERLPDQVDWRTKGAVTPVRNQGECGSCYAFATAAALEAYHKQMTGRLLDLSPQNIVDCTRNLG-------NNGCSGGYMPTAFQY 257          
BLAST of DR403383 vs. ExPASy Swiss-Prot
Match: CATW_MOUSE (Cathepsin W OS=Mus musculus GN=Ctsw PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 1.575e-16
Identity = 55/178 (30.90%), Postives = 88/178 (49.44%), Query Frame = 3
Query:  156 LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLD-PTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND-LPTDFDWRD-HGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL 680
            L  +  F LF+ +F+++Y    E+  R  +F  NL +A+R Q  D  TA  G T FSDLT  EF + +       R P   +K       + +P   DWR     ++ VK+QG+C  CW+ +A   ++    +   + V +S Q+L+DC+          C +GCNGG +  A+  +L
Sbjct:   34 LELKEVFKLFQIRFNRSYWNPAEYTRRLSIFAHNLAQAQRLQQEDLGTAEFGETPFSDLTEEEFGQLYGQERSPERTPNMTKKVESNTWGESVPRTCDWRKAKNIISSVKNQGSCKCCWAMAAADNIQALWRIKHQQFVDVSVQELLDCER---------CGNGCNGGFVWDAYLTVL 202          

HSP 2 Score: 21.1718 bits (43), Expect = 1.575e-16
Identity = 7/12 (58.33%), Postives = 9/12 (75.00%), Query Frame = 1
Query:  691 GVEREKDYPYTG 726
            G+  EKDYP+ G
Sbjct:  206 GLASEKDYPFQG 217          
BLAST of DR403383 vs. ExPASy Swiss-Prot
Match: CATK_CHICK (Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.283e-16
Identity = 54/127 (42.52%), Postives = 66/127 (51.97%), Query Frame = 3
Query:  324 DLTPSEFRRQFLGL---------NRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 677
            D+T  E  R   GL         N  L +P  + +AP           DWR  G VT VKDQG CGSCW+FS+ GALEG     TG+L+SLS Q LV C          S ++GC GG M +AFEY+
Sbjct:   85 DMTSEEVVRTMTGLRVPRSRPRPNGTLYVPDWSSRAPAA--------VDWRRKGYVTPVKDQGQCGSCWAFSSVGALEGQLKRRTGKLLSLSPQNLVYC---------VSNNNGCGGGYMTNAFEYV 194          
BLAST of DR403383 vs. ExPASy Swiss-Prot
Match: MEX1_JACME (Mexicain OS=Jacaratia mexicana PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.314e-16
Identity = 36/84 (42.86%), Postives = 53/84 (63.10%), Query Frame = 3
Query:  429 PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL 680
            P   DWR+ GAVT VK+Q  CGSCW+FS    +EG + + TG+L+SLSEQ+L+DC++            GC+GG    + +Y++
Sbjct:    2 PESIDWREKGAVTPVKNQNPCGSCWAFSTVATIEGINKIITGQLISLSEQELLDCEYR---------SHGCDGGYQTPSLQYVV 76          
BLAST of DR403383 vs. ExPASy Swiss-Prot
Match: CATO_MOUSE (Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.248e-15
Identity = 48/121 (39.67%), Postives = 63/121 (52.07%), Query Frame = 3
Query:  294 TAVHGVTKFSDLTPSEFRRQFLGLNRRL--RLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGG 650
            TA +GV +FS L P EF+  +LG       R PA+ Q+   +P   LP  FDWRD   V  V++Q  CG CW+FS   A+E A  +    L  LS QQ++DC            +SGC GG
Sbjct:   55 TAFYGVNQFSYLFPEEFKALYLGSKYAWAPRYPAEGQRP--IPNVSLPLRFDWRDKHVVNPVRNQEMCGGCWAFSVVSAIESARAIQGKSLDYLSVQQVIDCSFN---------NSGCLGG 164          
BLAST of DR403383 vs. ExPASy Swiss-Prot
Match: PEPT1_PSOOV (Peptidase 1 OS=Psoroptes ovis PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.779e-15
Identity = 56/177 (31.64%), Postives = 80/177 (45.20%), Query Frame = 3
Query:  174 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFL-------GLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILK 683
            F  FK  F+K Y T E      + F A+L        ++      + +FSD++  EF+ Q+L        L +   L A AQ   I   N +P + D R  G VT +K+Q ACGSCW+FS    +E  +       + LSEQ+LVDC          +   GC G  + +   YI K
Sbjct:   26 FEEFKKAFNKHYVTPEAEQEARQNFLASLEH------IEKAGKGRINQFSDMSLEEFKNQYLMSDQAYEALKKEFDLDAGAQACQIGAVN-IPNEIDLRALGYVTKIKNQVACGSCWAFSGVATVESNYLSYDNVSLDLSEQELVDC----------ASQHGCGGDTVLNGLRYIQK 185          
BLAST of DR403383 vs. ExPASy Swiss-Prot
Match: CYSP_THEAN (Cysteine proteinase OS=Theileria annulata GN=TACP PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.630e-15
Identity = 65/217 (29.95%), Postives = 99/217 (45.62%), Query Frame = 3
Query:  108 IRQV--VPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFR---------RQFLGLNRRLRLPADAQKAPILPTN-----------DLPT----DFDWRDHGAVTGVKDQGA-CGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 677
            IRQ   + SD E   D L+     F  F  K+ K + + ++   RF  F+ N    K  +  +P ++  + KFSDL+  EF+         + +  L++ L     + K PI  +            DL      + +W    AV+ +KDQG  CGSCW+FS+  ++E  + L   +   LSEQ+LV+CD             GC GGL  +A EYI
Sbjct:  100 IRQTGKITSDAESELDMLIE----FDAFVEKYKKVHRSFDQRVQRFLTFRKNYHIVKTHKPTEPYSLD-LNKFSDLSDEEFKALYPVITPPKTYTSLSKHLEFKKMSHKNPIYISKLKKAKGIEEIKDLSLITGENLNWARTDAVSPIKDQGDHCGSCWAFSSIASVESLYRLYKNKSYFLSEQELVNCD---------KSSMGCAGGLPITALEYI 302          
The following BLAST results are available for this feature:
BLAST of DR403383 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
CATQ_RAT5.526e-1732.28Cathepsin Q OS=Rattus norvegicus GN=Ctsq PE=2 SV=1[more]
ERVC_TABDI5.610e-1748.24Ervatamin-C OS=Tabernaemontana divaricata PE=1 SV=... [more]
CATR_MOUSE1.215e-1632.80Cathepsin R OS=Mus musculus GN=Ctsr PE=2 SV=1[more]
CATL_BRUPA1.474e-1632.29Cathepsin L-like OS=Brugia pahangi PE=1 SV=1[more]
CATW_MOUSE1.575e-1630.90Cathepsin W OS=Mus musculus GN=Ctsw PE=2 SV=1[more]
CATK_CHICK3.283e-1642.52Cathepsin K OS=Gallus gallus GN=CTSK PE=2 SV=1[more]
MEX1_JACME7.314e-1642.86Mexicain OS=Jacaratia mexicana PE=1 SV=1[more]
CATO_MOUSE1.248e-1539.67Cathepsin O OS=Mus musculus GN=Ctso PE=2 SV=1[more]
PEPT1_PSOOV2.779e-1531.64Peptidase 1 OS=Psoroptes ovis PE=1 SV=1[more]
CYSP_THEAN3.630e-1529.95Cysteine proteinase OS=Theileria annulata GN=TACP ... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244N07 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244N07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403383 ID=DR403383; Name=DR403383; organism=Citrus sinensis; type=EST; length=742bp
GGGGAAACAAATCGAAAATGGAGCGCCTTATTCTCTCCTCTCTCCTCCTC
CTCCTCCTATCTTCTGTGCTTGCGTCCGCTGTAGCTGTCAACGACGACGA
TGCTATGATCAGACAGGTCGTGCCGTCAGACGGCGAACAATCCGAAGATC
ATCTCCTGAACGCGGAGCACCACTTCTCCCTCTTCAAGTCCAAATTCTCC
AAGACTTACGCCACCCAGGAGGAGCACGATTACCGATTCCGCGTGTTCAA
GGCTAATCTGCGCCGAGCAAAGCGACGCCAGCTCCTGGACCCCACTGCTG
TCCACGGTGTCACCAAGTTCTCCGACTTAACGCCGTCTGAATTCCGCCGT
CAGTTCCTTGGCTTGAATAGGCGGCTTCGGCTGCCAGCTGACGCTCAAAA
GGCTCCTATTCTCCCCACCAACGATCTTCCTACTGACTTTGACTGGCGTG
ATCACGGCGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGC
TGGTCGTTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGAC
GGGCGAGCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACG
AGTGTGATCCAGAGGAATCTGGTTCATGTGACTCTGGGTGCAATGGTGGG
CTAATGAACTCTGCCTTTGAGTACATACTCAAGGCTNGGTGGGGTTGAGC
GAGAGAAGGACTACCCTTACACTGGGANNNACGGTGGTTCCT
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