DR403383

Overview
NameDR403383
Unique NameDR403383
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
DR403383_ssr42 microsatellite DR403383_ssr42:42..56. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig7034 contig Csv1_Contig7034:97..837. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403383 vs. ExPASy Swiss-Prot
Match: CATV_NPVEP (Viral cathepsin OS=Epiphyas postvittana nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 8.850e-26
Identity = 62/177 (35.03%), Postives = 100/177 (56.50%), Query Frame = 3
Query:  153 LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPI-LPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL 680
            +L A ++F  F  +++K Y ++ E   R+++F+ NL     +   D TAV+ + KFSDL+  E   ++ GL+  L      +   +  P    P +FDWR    +T VK+QG CG+CW+F+   +LE    ++   L++LSEQQ++DCD         S D GC GGL+++AFE I+
Sbjct:   21 ILKAPNYFEEFVRQYNKQYDSEYEKLRRYKIFQHNLNDIITKNRND-TAVYKINKFSDLSKDETIAKYTGLSLPLHTQNFCEVVVLDRPPGKGPLEFDWRRFNKITSVKNQGMCGACWAFATLASLESQFAIAHDRLINLSEQQMIDCD---------SVDVGCEGGLLHTAFEAII 187          

HSP 2 Score: 23.483 bits (49), Expect = 8.850e-26
Identity = 8/12 (66.67%), Postives = 10/12 (83.33%), Query Frame = 1
Query:  685 LGGVEREKDYPY 720
            +GGV+ E DYPY
Sbjct:  189 MGGVQIENDYPY 200          
BLAST of DR403383 vs. ExPASy Swiss-Prot
Match: CATS_SAIBB (Cathepsin S OS=Saimiri boliviensis boliviensis GN=CTSS PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.018e-25
Identity = 70/179 (39.11%), Postives = 96/179 (53.63%), Query Frame = 3
Query:  165 EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTND---LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL 680
            +HH++L+K  + K Y  + E   R  +++ NL+      L     +H    G+    D+T  E     + L   LR+P   Q+     +N    LP   DWR+ G VT VK QG+CG+CW+FSA GALE    L TG+LVSLS Q LVDC      E+ G  + GCNGG M  AF+YI+
Sbjct:   25 DHHWNLWKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEV----MSLMSSLRVPNQWQRNITYKSNPNQMLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCS-----EKYG--NKGCNGGFMTEAFQYII 192          
BLAST of DR403383 vs. ExPASy Swiss-Prot
Match: CATS_BOVIN (Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 1.018e-25
Identity = 69/179 (38.55%), Postives = 92/179 (51.40%), Query Frame = 3
Query:  165 EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH----GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPIL---PTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL 680
            +HH+ L+K  + K Y  + E   R  +++ NL+      L     +H    G+    D+T  E     + L   LR+P+   +       P   LP   DWR+ G VT VK QGACGSCW+FSA GALE    L TG+LVSLS Q LVDC        +   + GCNGG M  AF+YI+
Sbjct:   25 DHHWDLWKKTYGKQYKEKNEEVARRLIWEKNLKTVTLHNLEHSMGMHSYELGMNHLGDMTSEEV----ISLMSSLRVPSQWPRNVTYKSDPNQKLPDSMDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDC------STAKYGNKGCNGGFMTEAFQYII 193          
BLAST of DR403383 vs. ExPASy Swiss-Prot
Match: CATL2_BOVIN (Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.018e-25
Identity = 70/177 (39.55%), Postives = 93/177 (52.54%), Query Frame = 3
Query:  159 NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHG----VTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 677
            N + H+  +K+   + Y   EE ++R  V++ N +             HG    +  F D+T  EFR+   G   +          P+L   D+P   DW   G VT VK+QG CGSCW+FSATGALEG  F  TG+LVSLSEQ LVDC            + GCNGGLM++AF+YI
Sbjct:   24 NLDAHWHQWKATHRRLYGMNEE-EWRRAVWEKNKKIIDLHNQEYSEGKHGFRMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKLFHEPLLV--DVPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSR-------AQGNQGCNGGLMDNAFQYI 190          
BLAST of DR403383 vs. ExPASy Swiss-Prot
Match: CATH_HUMAN (Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4)

HSP 1 Score: 117.087 bits (292), Expect = 1.018e-25
Identity = 70/172 (40.70%), Postives = 101/172 (58.72%), Query Frame = 3
Query:  171 HFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILP-TNDLPTDFDWRDHGA-VTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL 680
            HF  + SK  KTY+T+E H +R + F +N R+       + T    + +FSD++ +E + ++L    +      A K+  L  T   P   DWR  G  V+ VK+QGACGSCW+FS TGALE A  ++TG+++SL+EQQLVDC  + +       + GC GGL + AFEYIL
Sbjct:   34 HFKSWMSKHRKTYSTEEYH-HRLQTFASNWRKINAHNNGNHTFKMALNQFSDMSFAEIKHKYLWSEPQ---NCSATKSNYLRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCAQDFN-------NHGCQGGLPSQAFEYIL 194          
BLAST of DR403383 vs. ExPASy Swiss-Prot
Match: BROM1_ANACO (Fruit bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.018e-25
Identity = 60/175 (34.29%), Postives = 102/175 (58.29%), Query Frame = 3
Query:  174 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVH-GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDL-----PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL 680
            F  + +++ + Y   +E   RF++FK N++  +     +  +   G+ +F+D+T SEF  Q+ G++    LP + ++ P++  +D+     P   DWRD+GAV  VK+Q  CGSCWSF+A   +EG + + TG LVSLSEQ+++DC          +   GC GG +N A+++I+
Sbjct:   37 FEEWMAEYGRVYKDDDEKMRRFQIFKNNVKHIETFNSRNENSYTLGINQFTDMTKSEFVAQYTGVS----LPLNIEREPVVSFDDVNISAVPQSIDWRDYGAVNEVKNQNPCGSCWSFAAIATVEGIYKIKTGYLVSLSEQEVLDC----------AVSYGCKGGWVNKAYDFII 197          
BLAST of DR403383 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.149e-25
Identity = 66/168 (39.29%), Postives = 91/168 (54.17%), Query Frame = 3
Query:  174 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 677
            F+ F  ++ K+Y +  E   RFR+F  +L   +           G+ +FSD++  EF+   LG  +       A    +     LP   DWR+ G V+ VK+Q  CGSCW+FS TGALE A+  +TG+ +SLSEQQLVDC         G  + GCNGGL + AFEYI
Sbjct:   61 FARFAVRYGKSYESAAEVRRRFRIFSESLEEVRSTNRKGLPYRLGINRFSDMSWEEFQATRLGAAQTCSATL-AGNHLMRDAAALPETKDWREDGIVSPVKNQAHCGSCWTFSTTGALEAAYTQATGKNISLSEQQLVDC-------AGGFNNFGCNGGLPSQAFEYI 220          

HSP 2 Score: 24.6386 bits (52), Expect = 1.149e-25
Identity = 8/16 (50.00%), Postives = 11/16 (68.75%), Query Frame = 1
Query:  688 GGVEREKDYPYTGXXG 735
            GG++ E+ YPY G  G
Sbjct:  224 GGIDTEESYPYKGVNG 239          
BLAST of DR403383 vs. ExPASy Swiss-Prot
Match: CATL1_HUMAN (Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 1.499e-25
Identity = 70/181 (38.67%), Postives = 96/181 (53.04%), Query Frame = 3
Query:  147 DHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTK----FSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 677
            DH L A+  ++ +K+  ++ Y   EE  +R  V++ N++  +          H  T     F D+T  EFR+   G   R        + P+    + P   DWR+ G VT VK+QG CGSCW+FSATGALEG  F  TG L+SLSEQ LVDC            + GCNGGLM+ AF+Y+
Sbjct:   22 DHSLEAQ--WTKWKAMHNRLYGMNEE-GWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLF--YEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDC-------SGPQGNEGCNGGLMDYAFQYV 190          

HSP 2 Score: 20.4014 bits (41), Expect = 1.499e-25
Identity = 6/11 (54.55%), Postives = 9/11 (81.82%), Query Frame = 1
Query:  688 GGVEREKDYPY 720
            GG++ E+ YPY
Sbjct:  194 GGLDSEESYPY 204          
BLAST of DR403383 vs. ExPASy Swiss-Prot
Match: CATL1_PIG (Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.950e-25
Identity = 68/178 (38.20%), Postives = 99/178 (55.62%), Query Frame = 3
Query:  159 NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHG----VTKFSDLTPSEFRRQFLGL-NRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 677
            N +  +  +K+   + Y   EE  +R  V++ N++  +          HG    +  F D+T  EFR+   G  N++ +      ++ +L   ++P   DWR+ G VT VK+QG CGSCW+FSATGALEG  F  TG+LVSLSEQ LVDC            + GCNGGLM++AF+Y+
Sbjct:   24 NLDADWYKWKATHGRLYGMNEE-GWRRAVWEKNMKMIELHNQEYSQGKHGFSMAMNAFGDMTNEEFRQVMNGFQNQKHKKGKVFHESLVL---EVPKSVDWREKGYVTAVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRP-------QGNQGCNGGLMDNAFQYV 190          

HSP 2 Score: 22.3274 bits (46), Expect = 1.950e-25
Identity = 7/13 (53.85%), Postives = 10/13 (76.92%), Query Frame = 1
Query:  688 GGVEREKDYPYTG 726
            GG++ E+ YPY G
Sbjct:  194 GGLDTEESYPYLG 206          
BLAST of DR403383 vs. ExPASy Swiss-Prot
Match: CATL1_CERAE (Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.538e-25
Identity = 70/181 (38.67%), Postives = 97/181 (53.59%), Query Frame = 3
Query:  147 DHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTK----FSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 677
            +H L A+  ++ +K+  ++ Y   EE  +R  V++ N++  +          H  T     F D+T  EFR+   G   R        + P+    + P   DWR+ G VT VK+QG CGSCW+FSATGALEG  F  TG+LVSLSEQ LVDC            + GCNGGLM+ AF+Y+
Sbjct:   22 NHSLEAQ--WTKWKAMHNRLYGMNEE-GWRRAVWEKNMKMIELHNQEYSQGKHSFTMAMNTFGDMTSEEFRQVMNGFQNRKPRKGKVFQEPLF--YEAPRSVDWREKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDC-------SGPQGNEGCNGGLMDYAFQYV 190          

HSP 2 Score: 20.4014 bits (41), Expect = 2.538e-25
Identity = 6/11 (54.55%), Postives = 9/11 (81.82%), Query Frame = 1
Query:  688 GGVEREKDYPY 720
            GG++ E+ YPY
Sbjct:  194 GGLDSEESYPY 204          
The following BLAST results are available for this feature:
BLAST of DR403383 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
CATV_NPVEP8.850e-2635.03Viral cathepsin OS=Epiphyas postvittana nucleopoly... [more]
CATS_SAIBB1.018e-2539.11Cathepsin S OS=Saimiri boliviensis boliviensis GN=... [more]
CATS_BOVIN1.018e-2538.55Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2[more]
CATL2_BOVIN1.018e-2539.55Cathepsin L2 OS=Bos taurus GN=CTSL2 PE=2 SV=1[more]
CATH_HUMAN1.018e-2540.70Cathepsin H OS=Homo sapiens GN=CTSH PE=1 SV=4[more]
BROM1_ANACO1.018e-2534.29Fruit bromelain OS=Ananas comosus PE=1 SV=1[more]
ALEU_HORVU1.149e-2539.29Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
CATL1_HUMAN1.499e-2538.67Cathepsin L1 OS=Homo sapiens GN=CTSL1 PE=1 SV=2[more]
CATL1_PIG1.950e-2538.20Cathepsin L1 OS=Sus scrofa GN=CTSL1 PE=2 SV=1[more]
CATL1_CERAE2.538e-2538.67Cathepsin L1 OS=Cercopithecus aethiops GN=CTSL1 PE... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCSAF-PNP1244N07 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244N07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403383 ID=DR403383; Name=DR403383; organism=Citrus sinensis; type=EST; length=742bp
GGGGAAACAAATCGAAAATGGAGCGCCTTATTCTCTCCTCTCTCCTCCTC
CTCCTCCTATCTTCTGTGCTTGCGTCCGCTGTAGCTGTCAACGACGACGA
TGCTATGATCAGACAGGTCGTGCCGTCAGACGGCGAACAATCCGAAGATC
ATCTCCTGAACGCGGAGCACCACTTCTCCCTCTTCAAGTCCAAATTCTCC
AAGACTTACGCCACCCAGGAGGAGCACGATTACCGATTCCGCGTGTTCAA
GGCTAATCTGCGCCGAGCAAAGCGACGCCAGCTCCTGGACCCCACTGCTG
TCCACGGTGTCACCAAGTTCTCCGACTTAACGCCGTCTGAATTCCGCCGT
CAGTTCCTTGGCTTGAATAGGCGGCTTCGGCTGCCAGCTGACGCTCAAAA
GGCTCCTATTCTCCCCACCAACGATCTTCCTACTGACTTTGACTGGCGTG
ATCACGGCGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGC
TGGTCGTTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGAC
GGGCGAGCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACG
AGTGTGATCCAGAGGAATCTGGTTCATGTGACTCTGGGTGCAATGGTGGG
CTAATGAACTCTGCCTTTGAGTACATACTCAAGGCTNGGTGGGGTTGAGC
GAGAGAAGGACTACCCTTACACTGGGANNNACGGTGGTTCCT
back to top