DR403374
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR403374 vs. ExPASy Swiss-Prot
Match: MAD16_ORYSJ (MADS-box transcription factor 16 OS=Oryza sativa subsp. japonica GN=MADS16 PE=1 SV=2) HSP 1 Score: 74.7146 bits (182), Expect = 5.971e-13 Identity = 34/53 (64.15%), Postives = 45/53 (84.91%), Query Frame = 1 Query: 25 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIILLQ*GK 183 MGRG++E+KRIEN NRQVT++KRR G++KKA EL+VLCDA+VA+I+ GK Sbjct: 1 MGRGKIEIKRIENATNRQVTYSKRRTGIMKKARELTVLCDAQVAIIMFSSTGK 53
BLAST of DR403374 vs. ExPASy Swiss-Prot
Match: AP32_ASAEU (MADS-box protein AeAP3-2 (Fragment) OS=Asarum europaeum GN=AP3-2 PE=2 SV=1) HSP 1 Score: 58.9214 bits (141), Expect = 1.058e-12 Identity = 53/184 (28.80%), Postives = 90/184 (48.91%), Query Frame = 2 Query: 167 FSNRGKLYEXCSSS-SMVKTLERYQKCNYGAPEPNVSAREALELSSQQEYL---KLKARYEALQRSQRNLLGEELGPLNSKELESLERQLDMSLKQIRSTRTQYMLDTLTELQHK--LLSEANKTLKQRLMEGYQVNTLQ--LNPSAEDCGYGLKPAQPQGDSFFHALECEPTLQ-IGYQPADP 691 FS+ GK++E S SM + ++RYQK +S A +QQ Y ++K + LQ + R+ GE+L L E+ LE+QL++S+ ++RS + Q + L L+ K +L E N+ L + + + + + Q ++PS D +G+ + L+ P L QPA P Sbjct: 23 FSSSGKMFEFSSPPISMREIIDRYQK---------LSGNCAPVYDNQQVYCEITRMKNEIDKLQATMRHFAGEDLTSLTMNEMLQLEQQLEISVNKVRSRKEQLLQQQLDNLRRKENMLEEQNRELYRVIQDHHAASMEQKMVDPSMLD-HFGVFYQDDHQAARSSMLQLSPQLHPFRLQPAQP 196 HSP 2 Score: 35.039 bits (79), Expect = 1.058e-12 Identity = 16/27 (59.26%), Postives = 21/27 (77.78%), Query Frame = 1 Query: 103 GLLKKAYELSVLCDAEVALIILLQ*GK 183 GLLKKA EL++LCDA++ +II GK Sbjct: 2 GLLKKARELAILCDAQLGVIIFSSSGK 28
BLAST of DR403374 vs. ExPASy Swiss-Prot
Match: AP3_ARATH (Floral homeotic protein APETALA 3 OS=Arabidopsis thaliana GN=AP3 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.870e-12 Identity = 31/47 (65.96%), Postives = 43/47 (91.49%), Query Frame = 1 Query: 25 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALII 165 M RG++++KRIEN+ NRQVT++KRRNGL KKA+EL+VLCDA V++I+ Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTVLCDARVSIIM 47
BLAST of DR403374 vs. ExPASy Swiss-Prot
Match: TT16_ARATH (Protein TRANSPARENT TESTA 16 OS=Arabidopsis thaliana GN=TT16 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.622e-12 Identity = 32/53 (60.38%), Postives = 42/53 (79.25%), Query Frame = 1 Query: 25 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIILLQ*GK 183 MGRG++E+K+IEN+ RQVTF+KRR GL+KK ELS+LCDA + LI+ GK Sbjct: 1 MGRGKIEIKKIENQTARQVTFSKRRTGLIKKTRELSILCDAHIGLIVFSATGK 53
BLAST of DR403374 vs. ExPASy Swiss-Prot
Match: MEF2D_XENLA (Myocyte-specific enhancer factor 2D homolog OS=Xenopus laevis GN=mef2d PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.299e-11 Identity = 31/47 (65.96%), Postives = 41/47 (87.23%), Query Frame = 1 Query: 25 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALII 165 MGR +++++RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALII Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALII 47
BLAST of DR403374 vs. ExPASy Swiss-Prot
Match: MEF2D_RAT (Myocyte-specific enhancer factor 2D OS=Rattus norvegicus GN=Mef2d PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.299e-11 Identity = 31/47 (65.96%), Postives = 41/47 (87.23%), Query Frame = 1 Query: 25 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALII 165 MGR +++++RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALII Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALII 47
BLAST of DR403374 vs. ExPASy Swiss-Prot
Match: MEF2D_MOUSE (Myocyte-specific enhancer factor 2D OS=Mus musculus GN=Mef2d PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.299e-11 Identity = 31/47 (65.96%), Postives = 41/47 (87.23%), Query Frame = 1 Query: 25 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALII 165 MGR +++++RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALII Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALII 47
BLAST of DR403374 vs. ExPASy Swiss-Prot
Match: MEF2D_HUMAN (Myocyte-specific enhancer factor 2D OS=Homo sapiens GN=MEF2D PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.299e-11 Identity = 31/47 (65.96%), Postives = 41/47 (87.23%), Query Frame = 1 Query: 25 MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALII 165 MGR +++++RI ++ NRQVTF KR+ GL+KKAYELSVLCD E+ALII Sbjct: 1 MGRKKIQIQRITDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALII 47 The following BLAST results are available for this feature:
BLAST of DR403374 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 98
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Sequences
The
following sequences are available for this feature:
EST sequence >DR403374 ID=DR403374; Name=DR403374; organism=Citrus sinensis; type=EST; length=751bpback to top |