DR403359

Overview
NameDR403359
Unique NameDR403359
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length136
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1234 contig Csv1_Contig1234:266..401. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK4_BRAJU (S-adenosylmethionine synthetase 4 OS=Brassica juncea GN=MSAMS4 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.154e-18
Identity = 40/45 (88.89%), Postives = 44/45 (97.78%), Query Frame = 1 
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQ+SDA LDACLEQDPES+VACETCTKTN+V
Sbjct:    7 TSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMV 51
[Close]
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK3_SOLLC (S-adenosylmethionine synthetase 3 OS=Solanum lycopersicum GN=SAM3 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.154e-18
Identity = 40/45 (88.89%), Postives = 44/45 (97.78%), Query Frame = 1 
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQ+SDA LDACLEQDPES+VACETCTKTN+V
Sbjct:    7 TSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMV 51
[Close]
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK3_CATRO (S-adenosylmethionine synthetase 3 OS=Catharanthus roseus GN=SAMS3 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.154e-18
Identity = 40/45 (88.89%), Postives = 44/45 (97.78%), Query Frame = 1 
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQ+SDA LDACLEQDPES+VACETCTKTN+V
Sbjct:    7 TSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMV 51
[Close]
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK2_TOBAC (S-adenosylmethionine synthetase 2 OS=Nicotiana tabacum GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.154e-18
Identity = 40/45 (88.89%), Postives = 44/45 (97.78%), Query Frame = 1 
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQ+SDA LDACLEQDPES+VACETCTKTN+V
Sbjct:    7 TSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMV 51
[Close]
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK2_SOLTU (S-adenosylmethionine synthetase 2 OS=Solanum tuberosum GN=METK2 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.154e-18
Identity = 40/45 (88.89%), Postives = 44/45 (97.78%), Query Frame = 1 
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQ+SDA LDACLEQDPES+VACETCTKTN+V
Sbjct:    7 TSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMV 51
[Close]
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK2_ACTCH (S-adenosylmethionine synthetase 2 OS=Actinidia chinensis GN=SAM2 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.154e-18
Identity = 40/45 (88.89%), Postives = 44/45 (97.78%), Query Frame = 1 
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQ+SDA LDACLEQDPES+VACETCTKTN+V
Sbjct:    7 TSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMV 51
[Close]
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK1_VITVI (S-adenosylmethionine synthetase 1 OS=Vitis vinifera GN=METK1 PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.154e-18
Identity = 40/45 (88.89%), Postives = 44/45 (97.78%), Query Frame = 1 
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQ+SDA LDACLEQDPES+VACETCTKTN+V
Sbjct:    7 TSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMV 51
[Close]
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK1_TOBAC (S-adenosylmethionine synthetase 1 OS=Nicotiana tabacum GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.154e-18
Identity = 40/45 (88.89%), Postives = 44/45 (97.78%), Query Frame = 1 
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQ+SDA LDACLEQDPES+VACETCTKTN+V
Sbjct:    7 TSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMV 51
[Close]
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK1_PETHY (S-adenosylmethionine synthetase 1 OS=Petunia hybrida GN=SAM1 PE=2 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 2.154e-18
Identity = 40/45 (88.89%), Postives = 44/45 (97.78%), Query Frame = 1 
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQ+SDA LDACLEQDPES+VACETCTKTN+V
Sbjct:    7 TSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTNMV 51
[Close]
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_MUSAC (S-adenosylmethionine synthetase OS=Musa acuminata GN=METK PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.813e-18
Identity = 40/45 (88.89%), Postives = 44/45 (97.78%), Query Frame = 1 
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQISDA LDACLEQDP+S+VACETCTKTN+V
Sbjct:    8 TSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMV 52
The following BLAST results are available for this feature:
BLAST of DR403359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 290
Match NameE-valueIdentityDescription
METK4_BRAJU2.154e-1888.89S-adenosylmethionine synthetase 4 OS=Brassica junc... [more]
METK3_SOLLC2.154e-1888.89S-adenosylmethionine synthetase 3 OS=Solanum lycop... [more]
METK3_CATRO2.154e-1888.89S-adenosylmethionine synthetase 3 OS=Catharanthus ... [more]
METK2_TOBAC2.154e-1888.89S-adenosylmethionine synthetase 2 OS=Nicotiana tab... [more]
METK2_SOLTU2.154e-1888.89S-adenosylmethionine synthetase 2 OS=Solanum tuber... [more]
METK2_ACTCH2.154e-1888.89S-adenosylmethionine synthetase 2 OS=Actinidia chi... [more]
METK1_VITVI2.154e-1888.89S-adenosylmethionine synthetase 1 OS=Vitis vinifer... [more]
METK1_TOBAC2.154e-1888.89S-adenosylmethionine synthetase 1 OS=Nicotiana tab... [more]
METK1_PETHY2.154e-1888.89S-adenosylmethionine synthetase 1 OS=Petunia hybri... [more]
METK_MUSAC2.813e-1888.89S-adenosylmethionine synthetase OS=Musa acuminata ... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244L16 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244L16 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403359 ID=DR403359; Name=DR403359; organism=Citrus sinensis; type=EST; length=136bp
ACCTCTGAATCTGTGAACCAGGGTCACCCCGACAAGTTGTGCGACCAGAT
CTCTGATGCCGCGCTTGATGCCTGCCTTGAGCAGGATCCTGAAAGCGAGG
TTGCCTGTGAGACATGCACCAAGACCAACGTGGTCA
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