DR403359

Overview
NameDR403359
Unique NameDR403359
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length136
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1234 contig Csv1_Contig1234:266..401. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_MEDTR (S-adenosylmethionine synthetase OS=Medicago truncatula GN=METK PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.813e-18
Identity = 40/45 (88.89%), Postives = 44/45 (97.78%), Query Frame = 1 
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQISDA LDACLEQDP+S+VACETCTKTN+V
Sbjct:    8 TSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMV 52
[Close]
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_MEDFA (S-adenosylmethionine synthetase OS=Medicago falcata GN=SAMS PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.813e-18
Identity = 40/45 (88.89%), Postives = 44/45 (97.78%), Query Frame = 1 
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQISDA LDACLEQDP+S+VACETCTKTN+V
Sbjct:    9 TSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMV 53
[Close]
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_BRARP (S-adenosylmethionine synthetase OS=Brassica rapa subsp. pekinensis GN=SAMS PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.813e-18
Identity = 40/45 (88.89%), Postives = 44/45 (97.78%), Query Frame = 1 
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQISDA LDACLEQDP+S+VACETCTKTN+V
Sbjct:    7 TSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMV 51
[Close]
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK5_BRAJU (S-adenosylmethionine synthetase 5 OS=Brassica juncea GN=MSAMS5 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.813e-18
Identity = 40/45 (88.89%), Postives = 44/45 (97.78%), Query Frame = 1 
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQISDA LDACLEQDP+S+VACETCTKTN+V
Sbjct:    7 TSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMV 51
[Close]
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK4_VITVI (S-adenosylmethionine synthetase 4 OS=Vitis vinifera GN=METK4 PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.813e-18
Identity = 40/45 (88.89%), Postives = 44/45 (97.78%), Query Frame = 1 
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQISDA LDACLEQDP+S+VACETCTKTN+V
Sbjct:    7 TSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNLV 51
[Close]
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK3_BRAJU (S-adenosylmethionine synthetase 3 OS=Brassica juncea GN=MSAMS3 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.813e-18
Identity = 40/45 (88.89%), Postives = 44/45 (97.78%), Query Frame = 1 
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQISDA LDACLEQDP+S+VACETCTKTN+V
Sbjct:    7 TSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMV 51
[Close]
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK2_ARATH (S-adenosylmethionine synthetase 2 OS=Arabidopsis thaliana GN=SAM2 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.813e-18
Identity = 40/45 (88.89%), Postives = 44/45 (97.78%), Query Frame = 1 
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQISDA LDACLEQDP+S+VACETCTKTN+V
Sbjct:    7 TSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMV 51
[Close]
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK1_POPTR (S-adenosylmethionine synthetase 1 OS=Populus trichocarpa GN=METK1 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.813e-18
Identity = 40/45 (88.89%), Postives = 44/45 (97.78%), Query Frame = 1 
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQISDA LDACLEQDP+S+VACETCTKTN+V
Sbjct:    7 TSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMV 51
[Close]
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK1_CATRO (S-adenosylmethionine synthetase 1 OS=Catharanthus roseus GN=SAMS1 PE=1 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.813e-18
Identity = 40/45 (88.89%), Postives = 44/45 (97.78%), Query Frame = 1 
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQISDA LDACLEQDP+S+VACETCTKTN+V
Sbjct:    7 TSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMV 51
[Close]
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK1_BRAJU (S-adenosylmethionine synthetase 1 OS=Brassica juncea GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 2.813e-18
Identity = 40/45 (88.89%), Postives = 44/45 (97.78%), Query Frame = 1 
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQISDA LDACLEQDP+S+VACETCTKTN+V
Sbjct:    7 TSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCTKTNMV 51
The following BLAST results are available for this feature:
BLAST of DR403359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 290
Match NameE-valueIdentityDescription
METK_MEDTR2.813e-1888.89S-adenosylmethionine synthetase OS=Medicago trunca... [more]
METK_MEDFA2.813e-1888.89S-adenosylmethionine synthetase OS=Medicago falcat... [more]
METK_BRARP2.813e-1888.89S-adenosylmethionine synthetase OS=Brassica rapa s... [more]
METK5_BRAJU2.813e-1888.89S-adenosylmethionine synthetase 5 OS=Brassica junc... [more]
METK4_VITVI2.813e-1888.89S-adenosylmethionine synthetase 4 OS=Vitis vinifer... [more]
METK3_BRAJU2.813e-1888.89S-adenosylmethionine synthetase 3 OS=Brassica junc... [more]
METK2_ARATH2.813e-1888.89S-adenosylmethionine synthetase 2 OS=Arabidopsis t... [more]
METK1_POPTR2.813e-1888.89S-adenosylmethionine synthetase 1 OS=Populus trich... [more]
METK1_CATRO2.813e-1888.89S-adenosylmethionine synthetase 1 OS=Catharanthus ... [more]
METK1_BRAJU2.813e-1888.89S-adenosylmethionine synthetase 1 OS=Brassica junc... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244L16 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244L16 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403359 ID=DR403359; Name=DR403359; organism=Citrus sinensis; type=EST; length=136bp
ACCTCTGAATCTGTGAACCAGGGTCACCCCGACAAGTTGTGCGACCAGAT
CTCTGATGCCGCGCTTGATGCCTGCCTTGAGCAGGATCCTGAAAGCGAGG
TTGCCTGTGAGACATGCACCAAGACCAACGTGGTCA
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