DR403359

Overview
NameDR403359
Unique NameDR403359
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length136
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_CLOBL (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=metK PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.495e-11
Identity = 30/45 (66.67%), Postives = 35/45 (77.78%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV +GHPDK+CDQISDA LDA L++DP   VACET   T +V
Sbjct:    6 TSESVTEGHPDKICDQISDAVLDAILDKDPNGRVACETAVTTGMV 50          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_CLOBK (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Okra / Type B1) GN=metK PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.495e-11
Identity = 30/45 (66.67%), Postives = 35/45 (77.78%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV +GHPDK+CDQISDA LDA L++DP   VACET   T +V
Sbjct:    6 TSESVTEGHPDKICDQISDAVLDAILDKDPNGRVACETAVTTGMV 50          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_CLOBJ (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Kyoto / Type A2) GN=metK PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.495e-11
Identity = 30/45 (66.67%), Postives = 35/45 (77.78%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV +GHPDK+CDQISDA LDA L++DP   VACET   T +V
Sbjct:    6 TSESVTEGHPDKICDQISDAVLDAILDKDPNGRVACETAVTTGMV 50          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_CLOBH (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=metK PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.495e-11
Identity = 30/45 (66.67%), Postives = 35/45 (77.78%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV +GHPDK+CDQISDA LDA L++DP   VACET   T +V
Sbjct:    6 TSESVTEGHPDKICDQISDAVLDAILDKDPNGRVACETAVTTGMV 50          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_CLOB1 (S-adenosylmethionine synthetase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=metK PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.495e-11
Identity = 30/45 (66.67%), Postives = 35/45 (77.78%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV +GHPDK+CDQISDA LDA L++DP   VACET   T +V
Sbjct:    6 TSESVTEGHPDKICDQISDAVLDAILDKDPNGRVACETAVTTGMV 50          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_SYNS9 (S-adenosylmethionine synthetase OS=Synechococcus sp. (strain CC9902) GN=metK PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.953e-11
Identity = 30/44 (68.18%), Postives = 34/44 (77.27%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNV 132
            TSESV +GHPDK+CDQ+SDA LDA L QDP S VACET   T +
Sbjct:    7 TSESVTEGHPDKICDQVSDAVLDALLAQDPASRVACETVVNTGL 50          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_SYNR3 (S-adenosylmethionine synthetase OS=Synechococcus sp. (strain RCC307) GN=metK PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.953e-11
Identity = 30/44 (68.18%), Postives = 34/44 (77.27%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNV 132
            TSESV +GHPDK+CDQ+SDA LDA L QDP S VACET   T +
Sbjct:    7 TSESVTEGHPDKICDQVSDAVLDALLAQDPASRVACETVVNTGL 50          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_SODGM (S-adenosylmethionine synthetase OS=Sodalis glossinidius (strain morsitans) GN=metK PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.953e-11
Identity = 31/45 (68.89%), Postives = 37/45 (82.22%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV++GHPDK+ DQISDA LDA L QDP++ VACET  KT +V
Sbjct:    7 TSESVSEGHPDKIADQISDAVLDAILAQDPKARVACETYVKTGMV 51          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_SHESW (S-adenosylmethionine synthetase OS=Shewanella sp. (strain W3-18-1) GN=metK PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.953e-11
Identity = 31/45 (68.89%), Postives = 37/45 (82.22%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV++GHPDK+ DQISDA LDA L QDP++ VACET  KT +V
Sbjct:    7 TSESVSEGHPDKIADQISDAVLDAILAQDPKARVACETYVKTGMV 51          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_SHESR (S-adenosylmethionine synthetase OS=Shewanella sp. (strain MR-7) GN=metK PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.953e-11
Identity = 31/45 (68.89%), Postives = 37/45 (82.22%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV++GHPDK+ DQISDA LDA L QDP++ VACET  KT +V
Sbjct:    7 TSESVSEGHPDKIADQISDAVLDAILAQDPKARVACETYVKTGMV 51          
The following BLAST results are available for this feature:
BLAST of DR403359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 290
Match NameE-valueIdentityDescription
METK_CLOBL1.495e-1166.67S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_CLOBK1.495e-1166.67S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_CLOBJ1.495e-1166.67S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_CLOBH1.495e-1166.67S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_CLOB11.495e-1166.67S-adenosylmethionine synthetase OS=Clostridium bot... [more]
METK_SYNS91.953e-1168.18S-adenosylmethionine synthetase OS=Synechococcus s... [more]
METK_SYNR31.953e-1168.18S-adenosylmethionine synthetase OS=Synechococcus s... [more]
METK_SODGM1.953e-1168.89S-adenosylmethionine synthetase OS=Sodalis glossin... [more]
METK_SHESW1.953e-1168.89S-adenosylmethionine synthetase OS=Shewanella sp. ... [more]
METK_SHESR1.953e-1168.89S-adenosylmethionine synthetase OS=Shewanella sp. ... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244L16 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244L16 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403359 ID=DR403359; Name=DR403359; organism=Citrus sinensis; type=EST; length=136bp
ACCTCTGAATCTGTGAACCAGGGTCACCCCGACAAGTTGTGCGACCAGAT
CTCTGATGCCGCGCTTGATGCCTGCCTTGAGCAGGATCCTGAAAGCGAGG
TTGCCTGTGAGACATGCACCAAGACCAACGTGGTCA
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