DR403359

Overview
NameDR403359
Unique NameDR403359
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length136
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_LEGPA (S-adenosylmethionine synthetase OS=Legionella pneumophila (strain Paris) GN=metK PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.420e-11
Identity = 30/45 (66.67%), Postives = 36/45 (80.00%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV++GHPDK+ DQISDA LDA L QDP++ VACE   KT +V
Sbjct:    8 TSESVSEGHPDKIADQISDAILDAILAQDPKARVACEVLVKTGMV 52          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_DESDG (S-adenosylmethionine synthetase OS=Desulfovibrio desulfuricans (strain G20) GN=metK PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.420e-11
Identity = 30/44 (68.18%), Postives = 34/44 (77.27%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNV 132
            TSESV +GHPDK+ DQISDA LD  LEQDP+S VACET   T +
Sbjct:   11 TSESVTEGHPDKVADQISDAVLDVLLEQDPDSRVACETMVTTGM 54          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_CLOPS (S-adenosylmethionine synthetase OS=Clostridium perfringens (strain SM101 / Type A) GN=metK PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.420e-11
Identity = 29/45 (64.44%), Postives = 34/45 (75.56%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV +GHPDK+CDQISDA LDA   +DP + VACET   T +V
Sbjct:    6 TSESVTEGHPDKICDQISDAVLDAIFAKDPNARVACETAVTTGLV 50          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_CLOP1 (S-adenosylmethionine synthetase OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=metK PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.420e-11
Identity = 29/45 (64.44%), Postives = 34/45 (75.56%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV +GHPDK+CDQISDA LDA   +DP + VACET   T +V
Sbjct:    6 TSESVTEGHPDKICDQISDAVLDAIFAKDPNARVACETAVTTGLV 50          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_ALHEH (S-adenosylmethionine synthetase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=metK PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.420e-11
Identity = 28/45 (62.22%), Postives = 35/45 (77.78%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV++GHPDK+ DQISDA LDA L +DP   +ACET  KT ++
Sbjct:    7 TSESVSEGHPDKMADQISDAVLDAILAEDPRGRIACETMIKTGII 51          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_ACIBY (S-adenosylmethionine synthetase OS=Acinetobacter baumannii (strain AYE) GN=metK PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.420e-11
Identity = 30/45 (66.67%), Postives = 36/45 (80.00%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV++GHPDK+ DQISDA LDA L++DP + VACET  KT  V
Sbjct:    8 TSESVSEGHPDKMADQISDAILDAILKEDPYARVACETLVKTGAV 52          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_ACIBT (S-adenosylmethionine synthetase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=metK PE=3 SV=2)

HSP 1 Score: 65.855 bits (159), Expect = 7.420e-11
Identity = 30/45 (66.67%), Postives = 36/45 (80.00%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV++GHPDK+ DQISDA LDA L++DP + VACET  KT  V
Sbjct:    8 TSESVSEGHPDKMADQISDAILDAILKEDPYARVACETLVKTGAV 52          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_ACIBS (S-adenosylmethionine synthetase OS=Acinetobacter baumannii (strain SDF) GN=metK PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.420e-11
Identity = 30/45 (66.67%), Postives = 36/45 (80.00%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV++GHPDK+ DQISDA LDA L++DP + VACET  KT  V
Sbjct:    8 TSESVSEGHPDKMADQISDAILDAILKEDPYARVACETLVKTGAV 52          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_ACIBC (S-adenosylmethionine synthetase OS=Acinetobacter baumannii (strain ACICU) GN=metK PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.420e-11
Identity = 30/45 (66.67%), Postives = 36/45 (80.00%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV++GHPDK+ DQISDA LDA L++DP + VACET  KT  V
Sbjct:    8 TSESVSEGHPDKMADQISDAILDAILKEDPYARVACETLVKTGAV 52          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_ACIAD (S-adenosylmethionine synthetase OS=Acinetobacter sp. (strain ADP1) GN=metK PE=3 SV=1)

HSP 1 Score: 65.855 bits (159), Expect = 7.420e-11
Identity = 30/45 (66.67%), Postives = 36/45 (80.00%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV++GHPDK+ DQISDA LDA L++DP + VACET  KT  V
Sbjct:    8 TSESVSEGHPDKMADQISDAILDAILKEDPYARVACETLVKTGAV 52          
The following BLAST results are available for this feature:
BLAST of DR403359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 290
Match NameE-valueIdentityDescription
METK_LEGPA7.420e-1166.67S-adenosylmethionine synthetase OS=Legionella pneu... [more]
METK_DESDG7.420e-1168.18S-adenosylmethionine synthetase OS=Desulfovibrio d... [more]
METK_CLOPS7.420e-1164.44S-adenosylmethionine synthetase OS=Clostridium per... [more]
METK_CLOP17.420e-1164.44S-adenosylmethionine synthetase OS=Clostridium per... [more]
METK_ALHEH7.420e-1162.22S-adenosylmethionine synthetase OS=Alkalilimnicola... [more]
METK_ACIBY7.420e-1166.67S-adenosylmethionine synthetase OS=Acinetobacter b... [more]
METK_ACIBT7.420e-1166.67S-adenosylmethionine synthetase OS=Acinetobacter b... [more]
METK_ACIBS7.420e-1166.67S-adenosylmethionine synthetase OS=Acinetobacter b... [more]
METK_ACIBC7.420e-1166.67S-adenosylmethionine synthetase OS=Acinetobacter b... [more]
METK_ACIAD7.420e-1166.67S-adenosylmethionine synthetase OS=Acinetobacter s... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCSAF-PNP1244L16 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244L16 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403359 ID=DR403359; Name=DR403359; organism=Citrus sinensis; type=EST; length=136bp
ACCTCTGAATCTGTGAACCAGGGTCACCCCGACAAGTTGTGCGACCAGAT
CTCTGATGCCGCGCTTGATGCCTGCCTTGAGCAGGATCCTGAAAGCGAGG
TTGCCTGTGAGACATGCACCAAGACCAACGTGGTCA
back to top