DR403359

Overview
NameDR403359
Unique NameDR403359
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length136
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1234 contig Csv1_Contig1234:266..401. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_VARPS (S-adenosylmethionine synthetase OS=Variovorax paradoxus (strain S110) GN=metK PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.690e-11
Identity = 31/45 (68.89%), Postives = 35/45 (77.78%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV++GHPDK+ DQISDA LDA  EQDP S VA ET T T +V
Sbjct:    8 TSESVSEGHPDKVADQISDAILDAIFEQDPRSRVAAETLTNTGLV 52          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_PSYIN (S-adenosylmethionine synthetase OS=Psychromonas ingrahamii (strain 37) GN=metK PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.690e-11
Identity = 30/45 (66.67%), Postives = 37/45 (82.22%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV++GHPDK+ DQISDA LDA L+QD ++ VACET  KT +V
Sbjct:    7 TSESVSEGHPDKIADQISDAVLDAILKQDKKARVACETYVKTGMV 51          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_PARDP (S-adenosylmethionine synthetase OS=Paracoccus denitrificans (strain Pd 1222) GN=metK PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.690e-11
Identity = 30/45 (66.67%), Postives = 34/45 (75.56%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV++GHPDKLCDQISDA LDA L +DP + VACE    T  V
Sbjct:    9 TSESVSEGHPDKLCDQISDAVLDALLAEDPAARVACEAFATTGTV 53          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_NITEU (S-adenosylmethionine synthetase OS=Nitrosomonas europaea GN=metK PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.690e-11
Identity = 29/45 (64.44%), Postives = 36/45 (80.00%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV++GHPDK+ DQISDA LDA L+QDP + VACET   T ++
Sbjct:    7 TSESVSEGHPDKVADQISDAILDAILQQDPHARVACETMCSTGLI 51          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_NITEC (S-adenosylmethionine synthetase OS=Nitrosomonas eutropha (strain C91) GN=metK PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.690e-11
Identity = 29/45 (64.44%), Postives = 36/45 (80.00%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV++GHPDK+ DQISDA LDA L+QDP + VACET   T ++
Sbjct:    7 TSESVSEGHPDKVADQISDAILDAILQQDPHARVACETMCSTGLI 51          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_LEPCP (S-adenosylmethionine synthetase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=metK PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.690e-11
Identity = 31/45 (68.89%), Postives = 35/45 (77.78%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV++GHPDK+ DQISDA LDA  EQDP S VA ET T T +V
Sbjct:    8 TSESVSEGHPDKVADQISDAILDAIFEQDPRSRVAAETLTNTGLV 52          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_KOSOT (S-adenosylmethionine synthetase OS=Kosmotoga olearia (strain TBF 19.5.1) GN=metK PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.690e-11
Identity = 31/44 (70.45%), Postives = 34/44 (77.27%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNV 132
            TSESV +GHPDK+ DQ+SDA LDA LEQDPES VA ET   T V
Sbjct:    7 TSESVTEGHPDKIADQVSDAILDAMLEQDPESRVAVETLVATGV 50          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_BACSK (S-adenosylmethionine synthetase OS=Bacillus clausii (strain KSM-K16) GN=metK PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.690e-11
Identity = 29/45 (64.44%), Postives = 35/45 (77.78%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV +GHPDK+CDQISDA LD  L++DP + VACET   T +V
Sbjct:   11 TSESVTEGHPDKICDQISDAILDEILKKDPNARVACETSVTTGLV 55          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_AKKM8 (S-adenosylmethionine synthetase OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=metK PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.690e-11
Identity = 30/45 (66.67%), Postives = 35/45 (77.78%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV +GHPDK+ D ISD+ LDACL QD  S VACET  K+N+V
Sbjct:   10 TSESVGEGHPDKVADYISDSILDACLAQDKTSRVACETLVKSNMV 54          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK1_RHORT (S-adenosylmethionine synthetase 1 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=metK1 PE=3 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 9.690e-11
Identity = 30/45 (66.67%), Postives = 33/45 (73.33%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV +GHPDK+CDQISD  LDACL QDP + VA ET    N V
Sbjct:    7 TSESVTEGHPDKVCDQISDGILDACLAQDPAARVAVETLVSGNTV 51          
The following BLAST results are available for this feature:
BLAST of DR403359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 290
Match NameE-valueIdentityDescription
METK_VARPS9.690e-1168.89S-adenosylmethionine synthetase OS=Variovorax para... [more]
METK_PSYIN9.690e-1166.67S-adenosylmethionine synthetase OS=Psychromonas in... [more]
METK_PARDP9.690e-1166.67S-adenosylmethionine synthetase OS=Paracoccus deni... [more]
METK_NITEU9.690e-1164.44S-adenosylmethionine synthetase OS=Nitrosomonas eu... [more]
METK_NITEC9.690e-1164.44S-adenosylmethionine synthetase OS=Nitrosomonas eu... [more]
METK_LEPCP9.690e-1168.89S-adenosylmethionine synthetase OS=Leptothrix chol... [more]
METK_KOSOT9.690e-1170.45S-adenosylmethionine synthetase OS=Kosmotoga olear... [more]
METK_BACSK9.690e-1164.44S-adenosylmethionine synthetase OS=Bacillus clausi... [more]
METK_AKKM89.690e-1166.67S-adenosylmethionine synthetase OS=Akkermansia muc... [more]
METK1_RHORT9.690e-1166.67S-adenosylmethionine synthetase 1 OS=Rhodospirillu... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244L16 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244L16 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403359 ID=DR403359; Name=DR403359; organism=Citrus sinensis; type=EST; length=136bp
ACCTCTGAATCTGTGAACCAGGGTCACCCCGACAAGTTGTGCGACCAGAT
CTCTGATGCCGCGCTTGATGCCTGCCTTGAGCAGGATCCTGAAAGCGAGG
TTGCCTGTGAGACATGCACCAAGACCAACGTGGTCA
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