DR403359

Overview
NameDR403359
Unique NameDR403359
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length136
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1234 contig Csv1_Contig1234:266..401. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK2_PETHY (S-adenosylmethionine synthetase 2 OS=Petunia hybrida GN=SAM2 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.184e-18
Identity = 39/45 (86.67%), Postives = 44/45 (97.78%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQ+SDA LDACLEQDPES+VACETCTKT++V
Sbjct:    7 TSESVNEGHPDKLCDQVSDAILDACLEQDPESKVACETCTKTSMV 51          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK2_DAUCA (S-adenosylmethionine synthetase 2 OS=Daucus carota GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.184e-18
Identity = 39/45 (86.67%), Postives = 44/45 (97.78%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQISDA LDACLEQDP+S+VACETC+KTN+V
Sbjct:    7 TSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCSKTNMV 51          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK2_BETVU (S-adenosylmethionine synthetase 2 OS=Beta vulgaris GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.184e-18
Identity = 39/45 (86.67%), Postives = 43/45 (95.56%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQ+SDA LDACL QDPES+VACETCTKTN+V
Sbjct:    7 TSESVNEGHPDKLCDQVSDAVLDACLAQDPESKVACETCTKTNMV 51          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK1_DAUCA (S-adenosylmethionine synthetase 1 OS=Daucus carota GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.184e-18
Identity = 39/45 (86.67%), Postives = 44/45 (97.78%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQISDA LDACLEQDP+S+VACETC+KTN+V
Sbjct:    7 TSESVNEGHPDKLCDQISDAVLDACLEQDPDSKVACETCSKTNMV 51          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_DENCR (S-adenosylmethionine synthetase OS=Dendrobium crumenatum GN=SAMS PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.069e-17
Identity = 39/45 (86.67%), Postives = 44/45 (97.78%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQISDA LDACLEQDP+S+VACETC+KTN+V
Sbjct:   10 TSESVNEGHPDKLCDQISDAILDACLEQDPDSKVACETCSKTNMV 54          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK1_BETVU (S-adenosylmethionine synthetase 1 OS=Beta vulgaris GN=SAMS1 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.069e-17
Identity = 39/45 (86.67%), Postives = 43/45 (95.56%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDK+CDQISDA LDACL QDPES+VACETCTKTN+V
Sbjct:   11 TSESVNEGHPDKMCDQISDAVLDACLAQDPESKVACETCTKTNLV 55          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_POPDE (S-adenosylmethionine synthetase OS=Populus deltoides GN=METK PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.396e-17
Identity = 39/45 (86.67%), Postives = 43/45 (95.56%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQISDA LDACL QDP+S+VACETCTKTN+V
Sbjct:    8 TSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMV 52          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_PINBN (S-adenosylmethionine synthetase OS=Pinus banksiana GN=METK PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.396e-17
Identity = 39/45 (86.67%), Postives = 43/45 (95.56%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQISDA LDACL QDP+S+VACETCTKTN+V
Sbjct:    7 TSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMV 51          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_CARPA (S-adenosylmethionine synthetase OS=Carica papaya GN=SAMS PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.396e-17
Identity = 39/45 (86.67%), Postives = 43/45 (95.56%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQISDA LDACL QDP+S+VACETCTKTN+V
Sbjct:    7 TSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMV 51          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK5_VITVI (S-adenosylmethionine synthetase 5 OS=Vitis vinifera GN=METK5 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.396e-17
Identity = 39/45 (86.67%), Postives = 43/45 (95.56%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQISDA LDACL QDP+S+VACETCTKTN+V
Sbjct:    7 TSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMV 51          
The following BLAST results are available for this feature:
BLAST of DR403359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 290
Match NameE-valueIdentityDescription
METK2_PETHY8.184e-1886.67S-adenosylmethionine synthetase 2 OS=Petunia hybri... [more]
METK2_DAUCA8.184e-1886.67S-adenosylmethionine synthetase 2 OS=Daucus carota... [more]
METK2_BETVU8.184e-1886.67S-adenosylmethionine synthetase 2 OS=Beta vulgaris... [more]
METK1_DAUCA8.184e-1886.67S-adenosylmethionine synthetase 1 OS=Daucus carota... [more]
METK_DENCR1.069e-1786.67S-adenosylmethionine synthetase OS=Dendrobium crum... [more]
METK1_BETVU1.069e-1786.67S-adenosylmethionine synthetase 1 OS=Beta vulgaris... [more]
METK_POPDE1.396e-1786.67S-adenosylmethionine synthetase OS=Populus deltoid... [more]
METK_PINBN1.396e-1786.67S-adenosylmethionine synthetase OS=Pinus banksiana... [more]
METK_CARPA1.396e-1786.67S-adenosylmethionine synthetase OS=Carica papaya G... [more]
METK5_VITVI1.396e-1786.67S-adenosylmethionine synthetase 5 OS=Vitis vinifer... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244L16 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244L16 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403359 ID=DR403359; Name=DR403359; organism=Citrus sinensis; type=EST; length=136bp
ACCTCTGAATCTGTGAACCAGGGTCACCCCGACAAGTTGTGCGACCAGAT
CTCTGATGCCGCGCTTGATGCCTGCCTTGAGCAGGATCCTGAAAGCGAGG
TTGCCTGTGAGACATGCACCAAGACCAACGTGGTCA
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