DR403359

Overview
NameDR403359
Unique NameDR403359
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length136
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1234 contig Csv1_Contig1234:266..401. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK5_POPTR (S-adenosylmethionine synthetase 5 OS=Populus trichocarpa GN=METK5 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.396e-17
Identity = 39/45 (86.67%), Postives = 43/45 (95.56%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQISDA LDACL QDP+S+VACETCTKTN+V
Sbjct:    8 TSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMV 52          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK3_POPTR (S-adenosylmethionine synthetase 3 OS=Populus trichocarpa GN=METK3 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.396e-17
Identity = 39/45 (86.67%), Postives = 43/45 (95.56%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQISDA LDACL QDP+S+VACETCTKTN+V
Sbjct:    8 TSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCTKTNMV 52          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK3_PICSI (S-adenosylmethionine synthetase 3 OS=Picea sitchensis GN=METK3 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.396e-17
Identity = 39/45 (86.67%), Postives = 43/45 (95.56%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQISDA LDACL QDP+S+VACETCTKTN+V
Sbjct:    7 TSESVNEGHPDKLCDQISDAVLDACLTQDPDSKVACETCTKTNMV 51          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK3_ORYSJ (S-adenosylmethionine synthetase 3 OS=Oryza sativa subsp. japonica GN=METK3 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.396e-17
Identity = 39/45 (86.67%), Postives = 43/45 (95.56%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQISDA LDACL +DPES+VACETCTKTN+V
Sbjct:   10 TSESVNEGHPDKLCDQISDAVLDACLAEDPESKVACETCTKTNMV 54          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK2_PINCO (S-adenosylmethionine synthetase 2 OS=Pinus contorta GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 1.396e-17
Identity = 39/45 (86.67%), Postives = 43/45 (95.56%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQISDA LDACL QDP+S+VACETCTKTN+V
Sbjct:    7 TSESVNEGHPDKLCDQISDAVLDACLTQDPDSKVACETCTKTNMV 51          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_GOSHI (S-adenosylmethionine synthetase OS=Gossypium hirsutum GN=SAMS PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.823e-17
Identity = 39/45 (86.67%), Postives = 43/45 (95.56%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQISDA LDACL QDPES+VACETC+KTN+V
Sbjct:    7 TSESVNEGHPDKLCDQISDAVLDACLAQDPESKVACETCSKTNMV 51          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK2_SUASA (S-adenosylmethionine synthetase 2 OS=Suaeda salsa GN=METK2 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.823e-17
Identity = 38/45 (84.44%), Postives = 43/45 (95.56%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQ+SDA LDACL QDP+S+VACETCTKTN+V
Sbjct:    7 TSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMV 51          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK2_ORYSJ (S-adenosylmethionine synthetase 2 OS=Oryza sativa subsp. japonica GN=SAM2 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.823e-17
Identity = 38/45 (84.44%), Postives = 43/45 (95.56%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQ+SDA LDACL QDP+S+VACETCTKTN+V
Sbjct:    9 TSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMV 53          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK2_HORVU (S-adenosylmethionine synthetase 2 OS=Hordeum vulgare GN=SAM2 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.823e-17
Identity = 38/45 (84.44%), Postives = 43/45 (95.56%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQ+SDA LDACL QDP+S+VACETCTKTN+V
Sbjct:    9 TSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMV 53          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK1_HORVU (S-adenosylmethionine synthetase 1 OS=Hordeum vulgare GN=SAM1 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.823e-17
Identity = 38/45 (84.44%), Postives = 43/45 (95.56%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQ+SDA LDACL QDP+S+VACETCTKTN+V
Sbjct:    9 TSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTKTNMV 53          
The following BLAST results are available for this feature:
BLAST of DR403359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 290
Match NameE-valueIdentityDescription
METK5_POPTR1.396e-1786.67S-adenosylmethionine synthetase 5 OS=Populus trich... [more]
METK3_POPTR1.396e-1786.67S-adenosylmethionine synthetase 3 OS=Populus trich... [more]
METK3_PICSI1.396e-1786.67S-adenosylmethionine synthetase 3 OS=Picea sitchen... [more]
METK3_ORYSJ1.396e-1786.67S-adenosylmethionine synthetase 3 OS=Oryza sativa ... [more]
METK2_PINCO1.396e-1786.67S-adenosylmethionine synthetase 2 OS=Pinus contort... [more]
METK_GOSHI1.823e-1786.67S-adenosylmethionine synthetase OS=Gossypium hirsu... [more]
METK2_SUASA1.823e-1784.44S-adenosylmethionine synthetase 2 OS=Suaeda salsa ... [more]
METK2_ORYSJ1.823e-1784.44S-adenosylmethionine synthetase 2 OS=Oryza sativa ... [more]
METK2_HORVU1.823e-1784.44S-adenosylmethionine synthetase 2 OS=Hordeum vulga... [more]
METK1_HORVU1.823e-1784.44S-adenosylmethionine synthetase 1 OS=Hordeum vulga... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244L16 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244L16 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403359 ID=DR403359; Name=DR403359; organism=Citrus sinensis; type=EST; length=136bp
ACCTCTGAATCTGTGAACCAGGGTCACCCCGACAAGTTGTGCGACCAGAT
CTCTGATGCCGCGCTTGATGCCTGCCTTGAGCAGGATCCTGAAAGCGAGG
TTGCCTGTGAGACATGCACCAAGACCAACGTGGTCA
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