DR403359

Overview
NameDR403359
Unique NameDR403359
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length136
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1234 contig Csv1_Contig1234:266..401. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK1_ACTCH (S-adenosylmethionine synthetase 1 OS=Actinidia chinensis GN=SAM1 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 1.823e-17
Identity = 38/45 (84.44%), Postives = 44/45 (97.78%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQ+SDA LDACL+QDPES+VACE+CTKTN+V
Sbjct:    7 TSESVNEGHPDKLCDQVSDAILDACLKQDPESKVACESCTKTNMV 51          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_CAMSI (S-adenosylmethionine synthetase OS=Camellia sinensis GN=SAM PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.381e-17
Identity = 39/45 (86.67%), Postives = 43/45 (95.56%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQISDA LDACLEQD +S+VACETCTKTN+V
Sbjct:    7 TSESVNEGHPDKLCDQISDAVLDACLEQDQDSKVACETCTKTNMV 51          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK2_PICSI (S-adenosylmethionine synthetase 2 OS=Picea sitchensis GN=METK2 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.381e-17
Identity = 39/45 (86.67%), Postives = 43/45 (95.56%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQISDA LDACL QDP+S+VACETCTKTN+V
Sbjct:    7 TSESVNEGHPDKLCDQISDAVLDACLIQDPDSKVACETCTKTNMV 51          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_WHEAT (S-adenosylmethionine synthetase OS=Triticum aestivum GN=SAMS PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.110e-17
Identity = 38/45 (84.44%), Postives = 43/45 (95.56%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQISDA LDACL +DP+S+VACETCTKTN+V
Sbjct:   10 TSESVNEGHPDKLCDQISDAVLDACLAEDPDSKVACETCTKTNMV 54          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK4_POPTR (S-adenosylmethionine synthetase 4 OS=Populus trichocarpa GN=METK4 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.110e-17
Identity = 38/45 (84.44%), Postives = 43/45 (95.56%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQ+SDA LDACL QDPES+VACETC+KTN+V
Sbjct:    7 TSESVNEGHPDKLCDQVSDAILDACLAQDPESKVACETCSKTNMV 51          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK4_HORVU (S-adenosylmethionine synthetase 4 OS=Hordeum vulgare GN=SAM4 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 3.110e-17
Identity = 38/45 (84.44%), Postives = 43/45 (95.56%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQISDA LDACL +DP+S+VACETCTKTN+V
Sbjct:   10 TSESVNEGHPDKLCDQISDAVLDACLAEDPDSKVACETCTKTNMV 54          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_LITCN (S-adenosylmethionine synthetase OS=Litchi chinensis GN=SAMS PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.062e-17
Identity = 37/45 (82.22%), Postives = 43/45 (95.56%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQ+SDA LDACL QDP+S+VACETCT+TN+V
Sbjct:    7 TSESVNEGHPDKLCDQVSDAVLDACLAQDPDSKVACETCTRTNMV 51          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK2_ELAUM (S-adenosylmethionine synthetase 2 OS=Elaeagnus umbellata GN=SAMS2 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.062e-17
Identity = 38/45 (84.44%), Postives = 43/45 (95.56%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQISDA LDACL QDP+S+VACETC+KTN+V
Sbjct:    7 TSESVNEGHPDKLCDQISDAVLDACLAQDPDSKVACETCSKTNMV 51          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK1_ORYSJ (S-adenosylmethionine synthetase 1 OS=Oryza sativa subsp. japonica GN=SAM1 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 4.062e-17
Identity = 37/45 (82.22%), Postives = 43/45 (95.56%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQ+SDA LDACL +DP+S+VACETCTKTN+V
Sbjct:   10 TSESVNEGHPDKLCDQVSDAVLDACLAEDPDSKVACETCTKTNMV 54          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK1_ORYSI (S-adenosylmethionine synthetase 1 OS=Oryza sativa subsp. indica GN=SAM1 PE=2 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 4.062e-17
Identity = 37/45 (82.22%), Postives = 43/45 (95.56%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESVN+GHPDKLCDQ+SDA LDACL +DP+S+VACETCTKTN+V
Sbjct:   10 TSESVNEGHPDKLCDQVSDAVLDACLAEDPDSKVACETCTKTNMV 54          
The following BLAST results are available for this feature:
BLAST of DR403359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 290
Match NameE-valueIdentityDescription
METK1_ACTCH1.823e-1784.44S-adenosylmethionine synthetase 1 OS=Actinidia chi... [more]
METK_CAMSI2.381e-1786.67S-adenosylmethionine synthetase OS=Camellia sinens... [more]
METK2_PICSI2.381e-1786.67S-adenosylmethionine synthetase 2 OS=Picea sitchen... [more]
METK_WHEAT3.110e-1784.44S-adenosylmethionine synthetase OS=Triticum aestiv... [more]
METK4_POPTR3.110e-1784.44S-adenosylmethionine synthetase 4 OS=Populus trich... [more]
METK4_HORVU3.110e-1784.44S-adenosylmethionine synthetase 4 OS=Hordeum vulga... [more]
METK_LITCN4.062e-1782.22S-adenosylmethionine synthetase OS=Litchi chinensi... [more]
METK2_ELAUM4.062e-1784.44S-adenosylmethionine synthetase 2 OS=Elaeagnus umb... [more]
METK1_ORYSJ4.062e-1782.22S-adenosylmethionine synthetase 1 OS=Oryza sativa ... [more]
METK1_ORYSI4.062e-1782.22S-adenosylmethionine synthetase 1 OS=Oryza sativa ... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244L16 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244L16 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403359 ID=DR403359; Name=DR403359; organism=Citrus sinensis; type=EST; length=136bp
ACCTCTGAATCTGTGAACCAGGGTCACCCCGACAAGTTGTGCGACCAGAT
CTCTGATGCCGCGCTTGATGCCTGCCTTGAGCAGGATCCTGAAAGCGAGG
TTGCCTGTGAGACATGCACCAAGACCAACGTGGTCA
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