DR403359

Overview
NameDR403359
Unique NameDR403359
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length136
Libraries
Library NameType
Flavedo Maturecdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1234 contig Csv1_Contig1234:266..401. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_TREDE (S-adenosylmethionine synthetase OS=Treponema denticola GN=metK PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.086e-13
Identity = 34/45 (75.56%), Postives = 37/45 (82.22%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV++GHPDKLCDQISDA LDACL  DPES VACET   T +V
Sbjct:    9 TSESVSEGHPDKLCDQISDAVLDACLRDDPESHVACETFASTALV 53          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_SCHPO (S-adenosylmethionine synthetase OS=Schizosaccharomyces pombe GN=sam1 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.086e-13
Identity = 33/45 (73.33%), Postives = 39/45 (86.67%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV +GHPDK+CDQISDA LDACL+ DP S+VACET +KT +V
Sbjct:    8 TSESVGEGHPDKICDQISDAILDACLKDDPFSKVACETASKTGMV 52          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK1_YEAST (S-adenosylmethionine synthetase 1 OS=Saccharomyces cerevisiae GN=SAM1 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 2.086e-13
Identity = 31/45 (68.89%), Postives = 38/45 (84.44%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV +GHPDK+CDQ+SDA LDACL +DP S+VACET  KT ++
Sbjct:    8 TSESVGEGHPDKICDQVSDAILDACLAEDPHSKVACETAAKTGMI 52          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_LEPIN (S-adenosylmethionine synthetase OS=Leptospira interrogans GN=metK PE=3 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 2.725e-13
Identity = 34/45 (75.56%), Postives = 38/45 (84.44%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV +GHPDK+CDQISDA LDA LEQDP+S VACET   TN+V
Sbjct:    9 TSESVGEGHPDKVCDQISDAVLDAYLEQDPKSRVACETLVTTNLV 53          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_LEPIC (S-adenosylmethionine synthetase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=metK PE=3 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 2.725e-13
Identity = 34/45 (75.56%), Postives = 38/45 (84.44%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV +GHPDK+CDQISDA LDA LEQDP+S VACET   TN+V
Sbjct:    9 TSESVGEGHPDKVCDQISDAVLDAYLEQDPKSRVACETLVTTNLV 53          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_TREPS (S-adenosylmethionine synthetase OS=Treponema pallidum subsp. pallidum (strain SS14) GN=metK PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.558e-13
Identity = 33/45 (73.33%), Postives = 38/45 (84.44%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV++GHPDKLCDQISDA LDACL QDP S VACET   T+++
Sbjct:    6 TSESVSEGHPDKLCDQISDAVLDACLSQDPHSCVACETFASTSLI 50          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_TREPA (S-adenosylmethionine synthetase OS=Treponema pallidum GN=metK PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.558e-13
Identity = 33/45 (73.33%), Postives = 38/45 (84.44%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV++GHPDKLCDQISDA LDACL QDP S VACET   T+++
Sbjct:    6 TSESVSEGHPDKLCDQISDAVLDACLSQDPHSCVACETFASTSLI 50          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_LEPBL (S-adenosylmethionine synthetase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=metK PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.558e-13
Identity = 34/45 (75.56%), Postives = 38/45 (84.44%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV +GHPDK+CDQISDA LDA LEQDP+S VACET   TN+V
Sbjct:    9 TSESVGEGHPDKVCDQISDAILDAYLEQDPKSRVACETLATTNLV 53          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK_LEPBJ (S-adenosylmethionine synthetase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=metK PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.558e-13
Identity = 34/45 (75.56%), Postives = 38/45 (84.44%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV +GHPDK+CDQISDA LDA LEQDP+S VACET   TN+V
Sbjct:    9 TSESVGEGHPDKVCDQISDAILDAYLEQDPKSRVACETLATTNLV 53          
BLAST of DR403359 vs. ExPASy Swiss-Prot
Match: METK1_CAEEL (Probable S-adenosylmethionine synthetase 1 OS=Caenorhabditis elegans GN=sams-1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.558e-13
Identity = 33/45 (73.33%), Postives = 40/45 (88.89%), Query Frame = 1
Query:    1 TSESVNQGHPDKLCDQISDAALDACLEQDPESEVACETCTKTNVV 135
            TSESV++GHPDK+CDQISDA LDA L+QDP ++VACET TKT +V
Sbjct:    8 TSESVSEGHPDKMCDQISDAVLDAHLKQDPNAKVACETVTKTGMV 52          
The following BLAST results are available for this feature:
BLAST of DR403359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 290
Match NameE-valueIdentityDescription
METK_TREDE2.086e-1375.56S-adenosylmethionine synthetase OS=Treponema denti... [more]
METK_SCHPO2.086e-1373.33S-adenosylmethionine synthetase OS=Schizosaccharom... [more]
METK1_YEAST2.086e-1368.89S-adenosylmethionine synthetase 1 OS=Saccharomyces... [more]
METK_LEPIN2.725e-1375.56S-adenosylmethionine synthetase OS=Leptospira inte... [more]
METK_LEPIC2.725e-1375.56S-adenosylmethionine synthetase OS=Leptospira inte... [more]
METK_TREPS3.558e-1373.33S-adenosylmethionine synthetase OS=Treponema palli... [more]
METK_TREPA3.558e-1373.33S-adenosylmethionine synthetase OS=Treponema palli... [more]
METK_LEPBL3.558e-1375.56S-adenosylmethionine synthetase OS=Leptospira borg... [more]
METK_LEPBJ3.558e-1375.56S-adenosylmethionine synthetase OS=Leptospira borg... [more]
METK1_CAEEL3.558e-1373.33Probable S-adenosylmethionine synthetase 1 OS=Caen... [more]

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Properties
Property NameValue
Genbank descriptionCSAF-PNP1244L16 Flavedo Mature Citrus sinensis cDNA clone CSAF-PNP1244L16 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DR403359 ID=DR403359; Name=DR403359; organism=Citrus sinensis; type=EST; length=136bp
ACCTCTGAATCTGTGAACCAGGGTCACCCCGACAAGTTGTGCGACCAGAT
CTCTGATGCCGCGCTTGATGCCTGCCTTGAGCAGGATCCTGAAAGCGAGG
TTGCCTGTGAGACATGCACCAAGACCAACGTGGTCA
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